mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (sorted from low to high skew) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 3547417 | 206 (1.020) | 5 (0.030) | 3/268 | NT | 2.3% | coding (974/2706 nt) | malT | mal regulon transcriptional activator |
| ? | CP009273 | 3547446 = | 217 (1.100) | coding (1003/2706 nt) | malT | mal regulon transcriptional activator | |||||
| * | ? | CP009273 | = 2811436 | 197 (0.980) | 4 (0.020) | 4/234 | NT | 2.4% | noncoding (59/77 nt) | argZ | tRNA‑Arg |
| ? | CP009273 | 2811717 = | 161 (0.940) | intergenic (‑84/+115) | argY/argV | tRNA‑Arg/tRNA‑Arg | |||||
| * | ? | CP009273 | = 2509092 | NA (NA) | 5 (0.030) | 3/268 | NT | 3.2% | intergenic (+170/+30) | insL1/yfeA | IS186 transposase/putative diguanylate cyclase |
| ? | CP009273 | = 2948461 | 157 (0.780) | coding (902/3543 nt) | recB | exonuclease V (RecBCD complex), beta subunit | |||||
| * | ? | CP009273 | = 1874094 | 191 (0.950) | 3 (0.020) | 3/268 | NT | 1.6% | coding (112/360 nt) | yeaR | DUF1971 family protein, nitrate‑inducible |
| ? | CP009273 | 2507756 = | NA (NA) | intergenic (+33/‑54) | nupC/insL1 | nucleoside (except guanosine) transporter/IS186 transposase | |||||
| * | ? | CP009273 | 1874084 = | 192 (0.950) | 6 (0.030) | 5/270 | NT | 3.1% | coding (122/360 nt) | yeaR | DUF1971 family protein, nitrate‑inducible |
| ? | CP009273 | = 2509093 | NA (NA) | intergenic (+171/+29) | insL1/yfeA | IS186 transposase/putative diguanylate cyclase | |||||
| * | ? | CP009273 | = 776902 | 121 (0.600) | 4 (0.020) | 3/234 | NT | 3.8% | intergenic (+2/‑131) | lysZ/lysQ | tRNA‑Lys/tRNA‑Lys |
| ? | CP009273 | 2514846 = | 102 (0.590) | noncoding (574/1345 nt) | IS186 | repeat region | |||||
| * | ? | CP009273 | = 671933 | 271 (1.340) | 3 (0.020) | 3/250 | NT | 1.3% | coding (71/978 nt) | ybeQ | Sel1 family TPR‑like repeat protein |
| ? | CP009273 | 672126 = | 211 (1.150) | intergenic (‑123/‑41) | ybeQ/ybeR | Sel1 family TPR‑like repeat protein/uncharacterized protein | |||||