Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 3,246,619 Δ1 bp 94.4% coding (350/357 nt) yhaI → DUF805 family inner membrane protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092733,246,6190C.94.4% 1010.8 / 52.1 214coding (350/357 nt)yhaIDUF805 family inner membrane protein
Reads supporting (aligned to +/- strand):  ref base C (7/5);  new base . (92/110);  total (99/115)
Fisher's exact test for biased strand distribution p-value = 5.53e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 217 total aligned reads displayed.

ATCCGTCGCTTACACGATACCGACCGTTCAGGTGCCTGGGCCTTGCTCTTTTTTGTTCCGTTTATTGGCTGGCTCGTGCTTCTGGTTTTTTTCTGCACAGAAGGTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTCAAATTAATCTTAGAATTGGGGCGATATTTCGCCCCTTTTTATTAACAATAATAAATATTATTTTCCGTTAAAAAGTTTGGGAATTTCCCGCAGACACCAGGATTTCGCTTCCCCCATACTGTCACGACGCCAGGCCATAATAAT  >  CP009273/3246471‑3246763
                                                                                                                                                    |                                                                                                                                                
aTCCGTCGCTTACACGATACCGACCGTTCAGGTGCCTGGGCCTTGCTCTTTTTTGTTCCGTTTATTGGCTGGCTCGTGCTTCTGGTTTTTTTCTGCACAGAAGGTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTCa                                                                                                                                                 >  2:3212750/1‑150 (MQ=255)
 tCCGTCGCTTACACGATACCGACCGTTCAGGTGCCTGGGCCTTGCTCTTTTTTGTTCCGTTTATTGGCTGGCTCGTGCTTCTGGTTTTTTTCTGCACAGAAGGTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTaaa                                                                                                                                                >  2:4216587/1‑150 (MQ=255)
  ccGTCGCTTACACGATACCGACCGTTCAGGTGCCTGGGCCTTGCTCTTTTTTGTTCCGTTTATTGGCTGGCTCGTGCTTCTGGTTTTTTTCTGCACAGAAGGTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTCaaa                                                                                                                                               >  1:4074673/1‑150 (MQ=255)
  ccGTCGCGTACACGATACCGACCGTTCAGGTGCCTGGGCCTTGCTCTTTTGTGTTCCGTTTATTGGCTGGCTCGTGCTTCTGGTTTTTTTCTGCACAGAAGGTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTaaat                                                                                                                                               <  1:3279629/150‑2 (MQ=255)
   cGTCGCTTACACGATACCGACCGTTCAGGTGCCTGGGCCTTGCTCTTTTTTGTTCCGTTTATTGGCTGGCTCGTGCTTCTGGTTTTTTTCTGCACAGAAGGTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTAAAtt                                                                                                                                             <  1:4910819/150‑1 (MQ=255)
   cGTCGCTTACACGATACCGACCGTTCAGGTGCCTGGGCCTTGCTCTTTTTTGTTCCGTTTATTGGCTGGCTCGTGCTTCTGGTTTTTTTCTGCACAGAAGGTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTAAAtt                                                                                                                                             <  2:1120800/150‑1 (MQ=255)
   cGTCGCTTACACGATACCGACCGTTCAGGTGCCTGGGCCTTGCTCTTTTTTGTTCCGTTTATTGGCTGGCTCGTGCTTCTGGTTTTTTTCTGCACAGAAGGTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTAAAtt                                                                                                                                             >  2:3713602/1‑150 (MQ=255)
    gTCGCTTACACGATACCGACCGTTCAGGTGCCTGGGCCTTGCTCTTTTTTGTTCCGTTTATTGGCTGGCTCGTGCTTCTGGTTTTTTTCTGCACAGAAGGTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTAAATTa                                                                                                                                            <  2:1547220/150‑1 (MQ=255)
    gTCGCTTACACGATACCGACCGTTCAGGTGCCTGGGCCTTGCTCTTTTTTGTTCCGTTTATTGGCTGGCTCGTGCTTCTGGTTTTTTTCTGCACAGAAGGTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTAAATTa                                                                                                                                            <  1:3102437/150‑1 (MQ=255)
       gCTTACACGATACCGACCGTTCAGGTGCCTGGGCCTTGCTCTTTTTTGTTCCGTTTATTGGCTGGCTCGTGCTTCTGGTTTTTTTCTGCACAGAAGGTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTAAATTAATc                                                                                                                                         <  2:508746/150‑1 (MQ=255)
           acacGATACCGACCGTTCAGGTGCCTGGGCCTTGCTCTTTTTTGTTCCGTTTATTGGCTGGCTCGTGCTTCTGGTTTTTTTCTGCACAGAAGGTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTAAATTAATCTTAg                                                                                                                                     <  1:3041261/150‑1 (MQ=255)
                  accgaccgTTCAGGTGCCTGGGCCTTGCTCTTTTTTGTTCCGTTTATTGGCTGGCTCGTGCTTCTGGTTTTTTTCTGCACAGAAGGTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTAAATTAATCTTAGAATTggg                                                                                                                              <  1:1160278/150‑1 (MQ=255)
                  accgaccgTTCAGGTGCCTGGGCCTTGCTCTTTTTTGTTCCGTTTATTGGCTGGCTCGTGCTTCTGGTTTTTTTCTGCACAGAAGGTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTAAATTAATCTTAGAATTggg                                                                                                                              >  2:3441603/1‑150 (MQ=255)
                    cgaccgTTCAGGTGCCTGGGCCTTGCTCTTTTTTGTTCCGTTTATTGGCTGGCTCGTGCTTCTGGTTTTTTTCTGCACAGAAGGTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTAAATTAATCTTAGAATTGGGGc                                                                                                                            <  1:3881611/150‑1 (MQ=255)
                     gaccgTTCAGGTGCCTGGGCCTTGCTCTTTTTTGTTCCGTTTATTGGCTGGCTCGTGCTTCTGGTTTTTTTCTGCACAGAAGGTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCg                                                                                                                           >  1:3224788/1‑150 (MQ=255)
                     gaccgTTCAGGTGCCTGGGCCTTGCTCTTTTTTGTTCCGTTTATTGGCTGGCTCGTGCTTCTGGTTTTTTTCTGCACAGAAGGTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCg                                                                                                                           <  2:2891191/150‑1 (MQ=255)
                     gaccgTTCAGGTGCCTGGGCCTTGCTCTTTTTTGTTCCGTTTATTGGCTGGCTCGTGCTTCTGGTTTTTTTCTGCACAGAAGGTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCg                                                                                                                           <  1:1126726/150‑1 (MQ=255)
                      accgTTCAGGTGCCTGGGCCTTGCTCTTTTTTGTTCCGTTTATTGGCTGGCTCGTGCTTCTGGTTTTTTTCTGCACAGAAGGTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCGa                                                                                                                          <  1:492931/150‑1 (MQ=255)
                         gTTCAGGTGCCTGGGCCTTGCTCTTTTTTGTTCCGTTTATTGGCTGGCTCGTGCTTCTGGTTTTTTTCTGCACAGAAGGTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCGatat                                                                                                                       >  2:881467/1‑150 (MQ=255)
                         gTTCAGGTGCCTGGGCCTTGCTCTTTTTTGTTCCGTTTATTGGCTGGCTCGTGCTTCTGGTTTTTTTCTGCACAGAAGGTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCGatat                                                                                                                       >  2:171977/1‑150 (MQ=255)
                         gTTCAGGTGCCTGGGCCTTGCTCTTTTTTGTTCCGTTTATTGGCTGGCTCGTGCTTCTGGTTTTTTTCTGCACAGAAGGTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCGatat                                                                                                                       >  2:1867405/1‑150 (MQ=255)
                           tCAGGTGCCTGGGCCTTGCTCTTTTTTGTTCCGTTTATTGGCTGGCTCGTGCTTCTGGTTTTTTTCTGCACAGAAGGTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCGATAttt                                                                                                                     >  2:2192684/1‑150 (MQ=255)
                           tCAGGTGCCTGGGCCTTGCTCTTTTTTGGTCCGTTTATTGGCTGGCTCGTGCTTCTGGTTTTTTTCTGCACAGAAGGTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTCAAATTAATCTTAGAATTGGGGCGATAtt                                                                                                                      <  2:501212/150‑1 (MQ=255)
                            cAGGTGCCTGGGCCTTGCTCTTTTTTGTTCCGTTTATTGGCTGGCTCGTGCTTCTGGTTTTTTTCTGCACAGAAGGTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCGATATTTc                                                                                                                    <  2:3041967/150‑1 (MQ=255)
                              ggTGCCTGGGCCTTGCTCTTTTTTGTTCCGTTTATTGGCTGGCTCGTGCTTCTGGTTTTTTTCTGCACAGAAGGTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCGATATTTCGc                                                                                                                  <  2:4163348/150‑1 (MQ=255)
                               gTGCCTGGGCCTTGCTCTTTTTTGTTCCGTTTATTGGCTGGCTCGTGCTTCTGGTTTTTTTCTGCACAGAAGGTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCGATATTTCGcc                                                                                                                 <  2:4918968/150‑1 (MQ=255)
                                tGCCTGGGCCTTGCTCTTTTTTGTTCCGTTTATTGGCTGGCTCGTGCTTCTGGTTTTTTTCTGCACAGAAGGTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCGATATTTCGccc                                                                                                                <  2:4754362/150‑1 (MQ=255)
                                   cTGGGCCTTGCTCTTTTTTGTTCCGTTTATTGGCTGGCTCGTGCTTCTGGTTTTTTTCTGCACAGAAGGTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCGATATTTCGCCCCtt                                                                                                             <  1:4578429/150‑1 (MQ=255)
                                   cTGGGCCTTGCTCTTTTTTGTTCCGTTTATTGGCTGGCTCGTGCTTCTGGTTTTTTTCTGCACAGAAGGTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCGATATTTCGCCCCtt                                                                                                             <  1:4277144/150‑1 (MQ=255)
                                   cTGGGCCTTGCTCTTTTTTGTTCCGTTTATTGGCTGGCTCGTGCTTCTGGTTTTTTTCTGCACAGAAGGTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCGATATTTCGCCCCtt                                                                                                             >  1:4088392/1‑150 (MQ=255)
                                   cTGGGCCTTGCTCTTTTTTGTTCCGTTTATAGGCTGGCACGTGATTCTGGTTTTTTTCTGCAAAGAAGGTACTTATGGCAGCAATCGTAACGGAAACGATCCGAAGTTTGGTTAAATTAATCTAAGAATTGGCGCGATATTTCGCCACta                                                                                                             >  2:339526/1‑149 (MQ=255)
                                     gggCCTTGCTCTTTTTTGTTCCGTTTATTGGCTGGCTCGTGCTTCTGGTTTTTTTCTGCACAGAAGGTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCGATATTTCGCCCCtttt                                                                                                           >  1:3679158/1‑150 (MQ=255)
                                     gggCCTTGCTCTTTTTTGTTCCGTTTATTGGCTGGCTCGTGCTTCTGGTTTTTTTCTGCACAGAAGGTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCGATATTTCGCCCCtttt                                                                                                           <  2:1178036/150‑1 (MQ=255)
                                       gCCTTGCTCTTTTTTGTTCCGTTTATTGGCTGGCTCGTGCTTCTGGTTTTTTTCTGCACAGAAGGTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTCAAATTAATCTTAGAATTGGGGCGATATTTCGCCCCttttt                                                                                                          <  2:3615965/150‑1 (MQ=255)
                                       gCCTTGCTCTTTTTTGTTCCGTTTATTGGCTGGCTCGTGCTTCTGGTTTTTTTCTGCACAGAAGGTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCGATATTTCGCCCCTTTtta                                                                                                         <  2:2793107/150‑1 (MQ=255)
                                       gCCTTGCTCTTTTATGTTCCGTTTCTTGGCTGGCTCGTGCTTCTGGTTTTTTACGGCACAGAAGGTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCGATATTTCGCCCCTTTtta                                                                                                         <  2:5163922/150‑1 (MQ=255)
                                        ccTTGCTCTTTTTTGTTCCGTTTATTGGCTGGCTCGTGCTTCTGGTTTTTTTCTGCACAGAAGGTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCGATATTTCGCCCCTTTttat                                                                                                        >  2:1405937/1‑150 (MQ=255)
                                        ccTTGCTCTTTTTTGTTCCGTTTATTGGCTGGCTCGTGCTTCTGGTATTTTTCTGCACAGAAGGTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCGATATTTCGCCCCTTTttat                                                                                                        <  1:3869088/150‑1 (MQ=255)
                                          ttGCTCTTTTTTGTTCCGTTTATTGGCTGGCTCGTGCTTCTGGTTTTTTTCTGCACAGAAGGTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCGATATTTCGCCCCTTTttatta                                                                                                      >  1:179474/1‑150 (MQ=255)
                                            gCTCTTTTTTGTTCCGTTTATTGGCTGGCTCGTGCTTCTGGTTTTTTTCTGCACAGAAGGTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCGATATTTCGCCCCTTTTTATTAAc                                                                                                    <  1:1402926/150‑1 (MQ=255)
                                             ctctTTTTTGTTCCGTTTATTGGCTGGCTCGTGCTTCTGGTTTTTTTCTGCACAGAAGGTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCGATATTTCGCCCCTTTTTATTAACa                                                                                                   <  1:4182589/150‑1 (MQ=255)
                                                ttttttGTTCCGTTTATTGGCTGGCTCGTGCTTCTGGTTTTTTTCTGCACAGAAGGTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCGATATTTCGCCCCTTTTTATTAACaata                                                                                                >  1:963417/1‑150 (MQ=255)
                                                   tttGTTCCGTTTATTGGCTGGCTCGTGCTTCTGGTTTTTTTCTGCACAGAAGGTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCGATATTTCGCCCCTTTTTATTAACAataata                                                                                             >  1:2292198/1‑150 (MQ=255)
                                                   tttGTTCCGTTTATTGGCTGGCTCGTGCTTCTGGTTTTTTTCTGCACAGAAGGTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCGATATTTCGCCCCTTTTTATTAACAataata                                                                                             >  1:3742971/1‑150 (MQ=255)
                                                     tGTTCCGTTTATTGGCTGGCTCGTGCTTCTGGTTTTTTTCTGCACAGAAGGTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCGATATTTCGCCCCTTTTTATTAACAATaataaa                                                                                           >  2:461066/1‑150 (MQ=255)
                                                     tGTTCCGTTTATTGGCTGGCTCGTGCTTCTGGTTTTTTTCTGCACAGAAGGTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCGATATTTCGCCCCTTTTTATTAACAATaataaa                                                                                           >  2:3839239/1‑150 (MQ=255)
                                                         ccGTTTATTGGCTGGCTCGTGCTTCTGGTTTTTTTCTGCACAGAAGGTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCGATATTTCGCCCCTTTTTATTAACAATAATAAAtatt                                                                                       >  1:1003244/1‑150 (MQ=255)
                                                                 tggctggcTCGTGCTTCTGGTTTTTTTCTGCACAGAAGGTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCGATATTTCGCCCCTTTTTATTAACAATAATAAATATTATTTTCCg                                                                               >  2:3796990/1‑150 (MQ=255)
                                                                     tggctCGTGCTTCTGGTTTTTTTCTGCACAGAAGGTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTCAAATTAATCTTAGATTTGGGGCGATATTTCGCCCCTTTTTATTAACAATAATAAATATTATTTTCCGTTa                                                                            >  1:2264140/1‑150 (MQ=255)
                                                                        ctCGTGCTTCTGGTTTTTTTCTGCACAGAAGGTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCGATATTTCGCCCCTTTTTATTAACAATAATAAATATTATTTTCCGTTaaaaa                                                                        >  2:4974459/1‑150 (MQ=255)
                                                                        ctCGTGCTTCTGGTTTTTTTCTGCACAGAAGGTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCGATATTTCGCCCCTTTTTATTAACAATAATAAATATTATTTTCCGTTaaaaa                                                                        <  2:396673/150‑1 (MQ=255)
                                                                          cGTGCTTCTGGTTTTTTTCTGCACAGAAGGTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCGATATTTCGCCCCTTTTTATTAACAATAATAAATATTATTTTCCGTTAAAAAGt                                                                      >  2:2033192/1‑150 (MQ=255)
                                                                          cGTGCTTCTGGTTTTTTTCTGCACAGAAGGTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCGATATTTCGCCCCTTTTTATTAACAATAATAAATATTATTTTCCGTTAAAAAGt                                                                      <  2:4113331/150‑1 (MQ=255)
                                                                            tGCTTCTGGTTTTTTTCTGCACAGAAGGTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCGATATTTCGCCCCTTTTTATTAACAATAATAAATATTATTTTCCGTTAAAAAGttt                                                                    <  2:3521438/150‑1 (MQ=255)
                                                                             gCTTCTGGTTTTTTTCTGCACAGAAGGTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTCAAATTAATCTTAGAATTGGGGCGATATTTCGCCCCTTTTTATTAACAATAATAAATATTATTTTCCGTTAAAAAGttt                                                                    >  1:4438764/1‑150 (MQ=255)
                                                                               ttCTGGTTTTTTTCTGCACAGAAGGTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCGATATTTCGCCCCTTTTTATTAACAATAATAAATATTATTTTCCGTTAAAAAGTTTggg                                                                 >  1:2416376/1‑150 (MQ=255)
                                                                                tCTGGTTTTTTTCTGCACAGAAGGTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCGATATTTCGCCCCTTTTTATTAACAATAATAAATATTATTTTCCGTTAAAAAGTTTGGGa                                                                >  1:1720080/1‑150 (MQ=255)
                                                                                tCTGGTTTTTTTCTGCACAGAAGGTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCGATATTTCGCCCCTTTTTATTAACAATAATAAATATTATTTTCCGTTAAAAAGTTTGGGa                                                                >  1:4119071/1‑150 (MQ=255)
                                                                                   ggTTTTTTTCTGCACAGAAGGTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCGATATTTCGCCCCTTTTTATTAACAATAATAAATATTATTTTCCGTTAAAAAGTTTGGGAAtt                                                             <  1:2061039/150‑1 (MQ=255)
                                                                                    gTTTTTTTCTGCACAGAAGGTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCGATATTTCGCCCCTTTTTATTAACAATAATAAATATTATTTTCCGTTAAAAAGTTTGGGAAttt                                                            >  2:1134765/1‑150 (MQ=255)
                                                                                      ttttttCTGCACAGAAGGTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCGATATTTCGCCCCTTTTTATTAACAATAATAAATATTATTTTCCGTTAAAAAGTTTGGGAATTTcc                                                          <  2:860766/150‑1 (MQ=255)
                                                                                       tttttCTGCACAGAAGGTACTTCTGGCAGCAATTGTTACGGAAACGATCCGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCGATATTTCGCCCCTTTTTATTAACAATAATAAATATTATTTTCCGTTAAAAAGTTTGGGAATTTccc                                                         >  2:1624745/1‑150 (MQ=255)
                                                                                       tttttCTGCACAGAAGGTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCGATATTTCGCCCCTTTTTATTAACAATAATAAATATTATTTTCCGTTAAAAAGTTTGGGAATTTccc                                                         <  1:1667416/150‑1 (MQ=255)
                                                                                           tCTGCACAGAAGGTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCGATATTTCGCCCCTTTTTATTAACAATAATAAATATTATTTTCCGTTAAAAAGTTTGGGAATTTCCCGCAg                                                     >  1:2483292/1‑150 (MQ=255)
                                                                                              gCACAGAAGGTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCGATATTTCGCCCCTTTTTATTAACAATAATAAATATTATTTTCCGTTAAAAAGTTTGGGAATTTCCCGCAGaca                                                  <  2:767326/150‑1 (MQ=255)
                                                                                              gCACAGAAGGTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCGATATTTCGCCCCTTTTTATTAACAATAATAAATATTATTTTCCGTTAAAAAGTTTGGGAATTTCCCGCAGaca                                                  <  1:4693571/150‑1 (MQ=255)
                                                                                                 caGAAGGTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCGATATTTCGCCCCTTTTTATTAACAATAATAAATATTATTTTCCGTTAAAAAGTTTGGGAATTTCCCGCAGACACCa                                               <  2:1207601/150‑1 (MQ=255)
                                                                                                 caGAAGGTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCGATATTTCGCCCCTTTTTATTAACAATAATAAATATTATTTTCCGTTAAAAAGTTTGGGAATTTCCCGCAGACACCa                                               <  1:3723704/150‑1 (MQ=255)
                                                                                                  aGAAGGTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCGATATTTCGCCCCTTTTTATTAACAATAATAAATATTATTTTCCGTTAAAAAGTTTGGGAATTTCCCGCAGACACCAg                                              <  2:1949043/150‑1 (MQ=255)
                                                                                                   gAAGGTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCGATATTTCGCCCCTTTTTATTAACAATAATAAATATTATTTTCCGTTAAAAAGTTTGGGAATTTCCCGCAGACACCAgg                                             >  2:16486/1‑150 (MQ=255)
                                                                                                     aGGTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCGATATTTCGCCCCTTTTTATTAACAATAATAAATATTATTTTCCGTTAAAAAGTTTGGGAATTTCCCGCAGACACCAGGAt                                           >  1:5055856/1‑150 (MQ=255)
                                                                                                     aGGTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCGATATTTCGCCCCTTTTTATTAACAATAATAAATATTATTTTCCGTTAAAAAGTTTGGGAATTTCCCGCAGACACCAGGAt                                           >  2:1311055/1‑150 (MQ=255)
                                                                                                       gTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCGATATTTCGCCCCTTTTTATTAACAATAATAAATATTATTTTCCGTTAAAAAGTTTGGGAATTTCCCGCAGACACCAGGAttt                                         <  2:303914/150‑1 (MQ=255)
                                                                                                        tACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCGATATTTCGCCCCTTTTTATTAACAATAATAAATATTATTTTCCGTTAAAAAGTTTGGGAATTTCCCGCAGACACCAGGATTTc                                        <  2:2474975/150‑1 (MQ=255)
                                                                                                         aCTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCGATATTTCGCCCCTTTTTATTAACAATAATAAATATTATTTTCCGTTAAAAAGTTTGGGAATTTCCCGCAGACACCAGGATTTCg                                       <  1:5064266/150‑1 (MQ=255)
                                                                                                         aCTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCGATATTTCGCCCCTTTTTATTAACAATAATAAATATTATTTTCCGTTAAAAAGTTTGGGAATTTCCCGCAGACACCAGGATTTCg                                       >  1:544069/1‑150 (MQ=255)
                                                                                                           ttCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCGATATTTCGCCCCTTTTTATTAACAATAATAAATATTATTTTCCGTTAAAAAGTTTGGGAATTTCCCGCAGACACCAGGATTTCGCt                                     <  2:2819343/150‑1 (MQ=255)
                                                                                                             cTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCGATATTTCGCCCCTTTTTATTAACAATAATAAATATTATTTTCCGTTAAAAAGTTTGGGAATTTCCCGCAGACACCAGGATTTCGCTTc                                   >  2:3115237/1‑150 (MQ=255)
                                                                                                             cTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCGATATTTCGCCCCTTTTTATTAACAATAATAAATATTATTTTCCGTTAAAAAGTTTGGGAATTTCCCGCAGACACCAGGATTTCGCTTc                                   <  1:3970059/150‑1 (MQ=255)
                                                                                                                 cagcaATCGTTACGGAAACGATCCGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCGATATTTCGCCCCTTTTTATTAACAATAATAAATATTATTTTCCGTTAAAAAGTTTGGGAATTTCCCGCAGACACCAGGATTTCGCTTccccc                               >  1:4919957/1‑150 (MQ=255)
                                                                                                                 cagcaATCGTTACGGAAACGATCCGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCGATATTTCGCCCCTTTTTATTAACAATAATAAATATTATTTTCCGTTAAAAAGTTTGGGAATTTCCCGCAGACACCAGGATTTCGCTTccccc                               <  1:5096203/150‑1 (MQ=255)
                                                                                                                  agcaATCGTTACGGAAACGATCCGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCGATATTTCGCCCCTTTTTATTAACAATAATAAATATTATTTTCCGTTATAAAGTTTGGGAATTTCCCGCAGACACCAGGATTTCGCTTCCCCCa                              >  2:2923371/1‑150 (MQ=255)
                                                                                                                    caATCGTTACGGAAACGATCCGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCGATATTTCGCCCCTTTTTATTAACAATAATAAATATTATTTTCCGTTAAAAAGTTTGGGAATTTCCCGCAGACACCAGGATTTCGCTTCCCCCATa                            <  1:461066/150‑1 (MQ=255)
                                                                                                                     aaTCGTTACGGAAACGATCCGAAGTTTGGTTCAAATTAATCTTAGAATTGGGGCGATATTTCGCCCCTTTTTATTAACAATAATAAATATTATTTTCCGTTAAAAAGTTTGGGAATTTCCCGCAGACACCAGGATTTCGCTTCCCCCATa                            >  1:1808009/1‑150 (MQ=255)
                                                                                                                              ggAAACGATCCGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCGATATTTCGCCCCTTTTTATTAACAATAATAAATATTATTTTCCGTTAAAAAGTTTGGGAATTTCCCGCAGACACCAGGATTTCGCTTCCCCCATACTGTCacgac                  >  1:825756/1‑150 (MQ=255)
                                                                                                                              ggAAACGATCCGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCGATATTTCGCCCCTTTTTATTAACAATAATAAATATTATTTTCCGTTAAAAAGTTTGGGAATTTCCCGCAGACACCAGGATTTCGCTTCCCCCATACTGTCacgac                  >  2:3073513/1‑150 (MQ=255)
                                                                                                                               gAAACGATCCGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCGATATTTCGCCCCTTTTTATTAACAATAATAAATATTATTTTCCGTTAAAAAGTTTGGGAATTTCCCGCAGACACCAGGATTTCGCTTCCCCCATACTGTCacgacg                 <  1:1108754/150‑1 (MQ=255)
                                                                                                                                 aaCGATCCGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCGATATTTCGCCCCTTTTTATTAACAATAATAAATATTATTTTCCGTTAAAAAGTTTGGGAATTTCCCGCAGACACCAGGATTTCGCTTCCCCCATACTGTCACGACGcc               <  1:2878453/150‑1 (MQ=255)
                                                                                                                                  aCGATCCGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCGATATTTCGCCCCTTTTTATTAACAATAATAAATATTATTTTCCGTTAAAAAGTTTGGGAATTTCCCGCAGACACCAGGATTTCGCTTCCCCCATACTGTCACGACGCCa              <  2:4207265/150‑1 (MQ=255)
                                                                                                                                    gATCCGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCGATATTTCGCCCCTTTTTATTAACAATAATAAATATTATTTTCCGTTAAAAAGTTTGGGAATTTCCCGCAGACACCAGGATTTCGCTTCCCCCATACTGTCACGACGCCAgg            >  2:2642297/1‑150 (MQ=255)
                                                                                                                                     aTCCGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCGATATTTCGCCCCTTTTTATTAACAATAATAAATATTATTTTCCGTTAAAAAGTTTGGGAATTTCCCGCAGACACCAGGATTTCGCTTCCCCCATACTGTCACGACGCCAGGc           <  2:3443405/150‑1 (MQ=255)
                                                                                                                                      tCCGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCGATATTTCGCCCCTTTTTATTAACAATAATAAATATTATTTTCCGTTAAAAAGTTTGGGAATTTCCCGCAGACACCAGGATTTCGCTTCCCCCATACTGTCACGACGCCAGGcc          >  2:4790421/1‑150 (MQ=255)
                                                                                                                                       ccGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCGATATTTCGCCCCTTTTTATTAACAATAATAAATATTATTTTCCGTTAAAAAGTTTGGGAATTTCCCGCAGACACCAGGATTTCGCTTCCCCCATACTGTCACGACGCCAGGCCa         >  1:4498572/1‑150 (MQ=255)
                                                                                                                                        cGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCGATATTTCGCCCCTTTTTATTAACAATAATAAATATTATTTTCCGTTAAAAAGTTTGGGAATTTCCCGCAGACACCAGGATTTCGCTTCCCCCATACTGTCACGACGCCAGGCCat        >  1:1991602/1‑150 (MQ=255)
                                                                                                                                        cGAAGTTTGGTTAAATTAATCTTAGAATTGGGGCGATATTTCGCCCCTTTTTATTAACAATAATAAATATTATTTTCCGTTAAAAAGTTTGGGAATATCCCGCAGACACCAGGCTTTCGCTTCCCCCATACTGTCACTACGCCAGGCCat        >  1:2666014/1‑150 (MQ=255)
                                                                                                                                         gAAGTTTGGTTAAATTAATCTTAGAATTGGGGCGATATTTCGCCCCTTTTTATTAACAATAATAAATATTATTTTCCGTTAAAAATTTTGGTAATTTCCCGCAGACACCAGGATTTCGCTTCACACATACTGTCACGACTCCAGGCCata       >  1:2327029/1‑150 (MQ=255)
                                                                                                                                         gAAGTTTGGTTAAATTAATCTTAGAATTGGGGCGATATTTCGCCCCTTTTAATTAACAATAATAAATATTATATTCCGTTAAAAAGTATGGGAATTTCCCGCAGACACCAGGATTTCGCTTCCCCCAAACTGTCACGACGCCAGGCCata       <  1:3441603/150‑1 (MQ=255)
                                                                                                                                            gTTTGGTTAAATTAATCTTAGAATTGGGGCGATATTTCGCCCCTTTTTATTAACAATAATAAATATTATTTTCCGTTAAAAAGTTTGGGAATTTCCCGCAGACACCAGGATTTCGCTTCCCCCATACTGTCACGACGCCAGGCCataata    >  2:1003007/1‑150 (MQ=255)
                                                                                                                                             tttGGTTAAATTAATCTTAGAATTGGGGCGATATTTCGCCCCTTTTTATTAACAATAATAAATATTATTTTCCGTTAAAAAGTTTGGGAATTTCCCGCAGACACCAGGATTTCGCTTCCCCCATACTGTCACGACGCCAGGCCataataa   <  1:3685919/150‑1 (MQ=255)
                                                                                                                                             tttGGTTAAATTAATCTTAGAATTGGGGCGATATTTCGCCCCTTTTTATTAACAATAATAAATATTATTTTCCGTTAAAAAGTTTGGGAATTTCCCGCAGACACCAGGATTTCGCTTCCCCCATACTGTCACGACGCCAGGCCataataa   <  1:1105345/150‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                
ATCCGTCGCTTACACGATACCGACCGTTCAGGTGCCTGGGCCTTGCTCTTTTTTGTTCCGTTTATTGGCTGGCTCGTGCTTCTGGTTTTTTTCTGCACAGAAGGTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTCAAATTAATCTTAGAATTGGGGCGATATTTCGCCCCTTTTTATTAACAATAATAAATATTATTTTCCGTTAAAAAGTTTGGGAATTTCCCGCAGACACCAGGATTTCGCTTCCCCCATACTGTCACGACGCCAGGCCATAATAAT  >  CP009273/3246471‑3246763

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: