BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	1635219 =	0 (0.000)	212 (0.760)	131/274	NT	100%	intergenic (‑377/+377)	essQ/cspB	Qin prophage; putative S lysis protein/Qin prophage; cold shock protein
*	?	CP009273	= 2063752	NA (NA)	212 (0.760)	131/274	NT	100%	noncoding (1/1331 nt)	IS2	repeat region

Only 100 of 240 total aligned reads displayed.

ATCTTTTCCTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGTTGATAGATGAGTCTGCGCTGGAGCGTGTTGAGGTAGTGAAAGGTCCATATTCCGTACTG  >  CP009273/2063606‑2063901

aTCTTTTCCTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TG                                                                                                                                                    <  1:4943524‑M1/150‑1 (MQ=255)

aTCTTTTCCTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TG                                                                                                                                                    <  1:4878504‑M1/150‑1 (MQ=255)

 tCTTTTCCTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGG                                                                                                                                                   <  2:4626483‑M1/150‑1 (MQ=255)

   ttttCCTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGGCg                                                                                                                                                 >  2:5008497/1‑150 (MQ=32)

     ttCCTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGGCGaa                                                                                                                                               >  1:372535/1‑150 (MQ=34)

      tCCTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGGCGAAg                                                                                                                                              >  1:2584102/1‑150 (MQ=35)

      tCCTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGGCGAAg                                                                                                                                              >  1:1547644/1‑150 (MQ=35)

        cTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGGCGAAGCa                                                                                                                                            >  1:3089260/1‑150 (MQ=37)

        cTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGGCGAAGCa                                                                                                                                            >  1:54836/1‑150 (MQ=37)

           tgtgGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGGCGAAGCAtcc                                                                                                                                         >  2:2048013/1‑150 (MQ=39)

           tgtgGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGGCGAAGCAtcc                                                                                                                                         <  1:2795506/150‑1 (MQ=39)

            gtgGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGGCGAAGCAtcct                                                                                                                                        <  2:3830036/150‑1 (MQ=40)

             tgGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCACTCATCTGTTCTCCAATGACTAGTCTAAAACCTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGGCGAAGCAtcctc                                                                                                                                       <  2:1119613/150‑1 (MQ=255)

             tgGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGGCGAAGCAtcctc                                                                                                                                       <  2:1531722/150‑1 (MQ=40)

               gTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGGCGAAGCATCCTccc                                                                                                                                     <  1:3654038/150‑1 (MQ=255)

                tACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATAATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAGTTGGatttgcccctatat                                                                                                                                     <  1:130008‑M1/150‑15 (MQ=255)

                 aCGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGGCGAAGCATCCTCCCgt                                                                                                                                   >  2:2238902/1‑150 (MQ=255)

                  cGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGGCGAAGCATCCTCCCgtg                                                                                                                                  >  2:3533310/1‑150 (MQ=255)

                  cGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGGCGAAGCATCCTCCCgtg                                                                                                                                  >  1:1882020/1‑150 (MQ=255)

                   gCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGGCGAAGCATCCTCCCgtgt                                                                                                                                 >  2:2555465/1‑150 (MQ=255)

                       tCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCGGGGGGCCAGTCTAG‑TGGCGAAGCATCCTCCCGTGTTTTa                                                                                                                             >  2:674782/1‑150 (MQ=255)

                       tCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGGCGAAGCATCCTCCCGTGTTTTa                                                                                                                             >  2:4880244/1‑150 (MQ=255)

                         tGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGGCGAAGCATCCTCCCGTGTTTTAAt                                                                                                                           <  1:670365/150‑1 (MQ=255)

                               tctcCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGGCGAAGCATCCTCCCGTGTTTTAATTCTCAt                                                                                                                     >  2:4213227/1‑150 (MQ=255)

                                 tcCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTg                                                                                                                   >  2:3520586/1‑150 (MQ=255)

                                    ggCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATg                                                                                                                >  2:4488603/1‑150 (MQ=255)

                                       ccTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTc                                                                                                             >  1:2552753/1‑150 (MQ=255)

                                       ccTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTc                                                                                                             >  1:5107672/1‑150 (MQ=255)

                                        cTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCTGGGGGCCAGTCTAG‑TGGCGAAGCATCCTCCCGTGTGTTAATTCTCATTGATGGTCa                                                                                                            >  1:973189/1‑150 (MQ=255)

                                        cTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCa                                                                                                            <  1:224369/150‑1 (MQ=255)

                                        cTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCa                                                                                                            <  1:1978217/150‑1 (MQ=255)

                                        cTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCa                                                                                                            >  1:973159/1‑150 (MQ=255)

                                         tAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCag                                                                                                           <  2:4164407/150‑1 (MQ=255)

                                          aaGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCagg                                                                                                          >  1:850409/1‑150 (MQ=255)

                                          aaGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCagg                                                                                                          >  2:4544770/1‑150 (MQ=255)

                                          aaGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCagg                                                                                                          <  1:2579348/150‑1 (MQ=255)

                                           aGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCagga                                                                                                         <  1:2669462/150‑1 (MQ=255)

                                             aCATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCaggagg                                                                                                       >  1:1791627/1‑150 (MQ=255)

                                                tcaatcaTCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTaa                                                                                                    <  2:4681204/150‑1 (MQ=255)

                                                          gTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAgcg                                                                                          <  2:2531541/150‑1 (MQ=255)

                                                          gTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAgcg                                                                                          <  2:873499/150‑1 (MQ=255)

                                                               ccAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTTACTTATCAGCGCGCCg                                                                                     <  2:3103016/150‑1 (MQ=255)

                                                                 aaTGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGga                                                                                   >  2:4951942/1‑150 (MQ=255)

                                                                 aaTGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGga                                                                                   <  1:1410350/150‑1 (MQ=255)

                                                                 aaTGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGga                                                                                   <  2:5127446/150‑1 (MQ=255)

                                                                  aTGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGgag                                                                                  >  1:4389791/1‑150 (MQ=255)

                                                                    gACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGAt                                                                                >  1:2276704/1‑150 (MQ=255)

                                                                     aCTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATa                                                                               <  2:4104332/150‑1 (MQ=255)

                                                                     aCTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATa                                                                               <  2:4806423/150‑1 (MQ=255)

                                                                     aCTAGTCGAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATa                                                                               <  2:1960940/150‑1 (MQ=255)

                                                                        aGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAAtt                                                                            <  1:1114889/150‑1 (MQ=255)

                                                                         gTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTa                                                                           <  1:1611220/150‑1 (MQ=255)

                                                                           cTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATg                                                                         <  1:2566204/150‑1 (MQ=255)

                                                                             aaaaaCTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGgt                                                                       <  2:4718842/150‑1 (MQ=255)

                                                                              aaaaCTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGgtg                                                                      <  2:1339855/150‑1 (MQ=255)

                                                                               aaaCTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGgtgt                                                                     >  1:3425900/1‑150 (MQ=255)

                                                                                caCTAGTATTAAGACTATCACTTATTTCAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGtgtg                                                                    <  1:558599/149‑1 (MQ=255)

                                                                                aaCTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGtgtg                                                                    <  2:1692958/150‑1 (MQ=255)

                                                                                     gTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACt                                                               <  1:828519/150‑1 (MQ=255)

                                                                                     gTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACt                                                               <  1:4219995/150‑1 (MQ=255)

                                                                                        ttAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGtt                                                            <  1:2106395/150‑1 (MQ=255)

                                                                                          aaGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGTTGa                                                          >  2:3608165/1‑150 (MQ=255)

                                                                                          aaGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGTTGa                                                          >  1:4566482/1‑150 (MQ=255)

                                                                                            gACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAC‑TGGatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattccagtggcgatcgataacacagcg                                                        >  2:2617580‑M1/1‑59 (MQ=255)

                                                                                             aCTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGTTGATAg                                                       >  2:1056347/1‑150 (MQ=255)

                                                                                              cTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGTTGATAGa                                                      <  1:1044763/150‑1 (MQ=255)

                                                                                               tATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGTTGATAGAt                                                     >  2:520291/1‑150 (MQ=255)

                                                                                                        tttAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGTTGATAGATGAGTCTgcg                                            <  2:4789244/150‑1 (MQ=255)

                                                                                                           aaGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGTTGATAGATGAGTCTGCGCTg                                         <  1:3597955/150‑1 (MQ=255)

                                                                                                               gATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGTTGATAGATGAGTCTGCGCTGGAGc                                     >  1:1318519/1‑150 (MQ=255)

                                                                                                                atatTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGGatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcg                                    >  1:14821‑M1/1‑39 (MQ=255)

                                                                                                                atatTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGTTGATAGATGAGTCTGCGCTGGAGCg                                    >  2:3953937/1‑150 (MQ=255)

                                                                                                                 tatTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGTTGATAGATGAGTCTGCGCTGGAGCgt                                   <  1:2048013/150‑1 (MQ=255)

                                                                                                                 tatTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGTTGATAGATGAGTCTGCGCTGGAGCgt                                   >  2:1515354/1‑150 (MQ=255)

                                                                                                                 tatTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGTTGATAGATGAGTCTGCGCTGGAGCgt                                   <  2:891595/150‑1 (MQ=255)

                                                                                                                  atTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGTTGATAGATGAGTCTGCGCTGGAGCgtg                                  >  1:315999/1‑150 (MQ=255)

                                                                                                                  atTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGTTGATAGATGAGTCTGCGCTGGAGCgtg                                  >  1:795389/1‑150 (MQ=255)

                                                                                                                    tGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGTTGATAGATGAGTCTGCGCTGGAGCGTGtt                                <  2:3407220/150‑1 (MQ=255)

                                                                                                                      gTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGTTGATAGATGAGTCTGCGCTGGAGCGTGTTGa                              >  1:4116057/1‑150 (MQ=255)

                                                                                                                             ggAGATTCAGGGGGCCAGTCTAG‑TGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGTTGATAGATGAGTCTGCGCTGGAGCGTGTTGAGGTAGTg                       >  1:3349317/1‑150 (MQ=255)

                                                                                                                                   tCAGGGGGCCAGTCTAG‑TGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGTTGATAGATGAGTCTGCGCTGGAGCGTGTTGAGGTAGTGAAAGGt                 <  2:2869356/150‑1 (MQ=255)

                                                                                                                                    cAGGGGGCCAGTCTAG‑TGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGTTGTTAGATGAGTCTGCGCTGGAGCGTGTTGAGGTAGTGAAAGGTc                <  2:749552/150‑1 (MQ=255)

                                                                                                                                    cAGGGGGCCAGTCTAG‑TGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGTTGATAGATGAGTCTGCGCTGGAGCGTGTTGAGGTAGTGAAAGGTc                >  1:3917384/1‑150 (MQ=255)

                                                                                                                                    cAGGGGGCCAGTCTAG‑TGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGTTGATAGATGAGTCTGCGCTGGAGCGTGTTGAGGTAGTGAAAGGTc                >  1:5011072/1‑150 (MQ=255)

                                                                                                                                         ggCCAGTCTAG‑TGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGTTGATAGATGAGTCTGCGCTGGAGCGTGTTGAGGTAGTGAAAGGTCCatat           <  1:5135549/150‑1 (MQ=255)

                                                                                                                                          gCCAGTCTAG‑TGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGTTGATAGATGAGTCTGCGCTGGAGCGTGTTGAGGTAGTGAAAGGTCCATAtt          <  1:3450971/150‑1 (MQ=255)

                                                                                                                                          gCCAGTCTAG‑TGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGTTGATAGATGAGTCTGCGCTGGAGCGTGTTGAGGTAGTGAAAGGTCCATAtt          >  2:3337821/1‑150 (MQ=255)

                                                                                                                                             aGTCTAG‑TGGatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggtt       <  2:139173‑M1/150‑141 (MQ=255)

                                                                                                                                             aGTCTAG‑TGGatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggtt       <  2:621698‑M1/150‑141 (MQ=255)

                                                                                                                                             aGTCTAG‑TGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGTTGATAGATGAGTCTGCGCTGGAGCGTGTTGAGGTAGTGAAAGGTCCATATTcca       <  1:4800874/150‑2 (MQ=255)

                                                                                                                                               tCTAG‑TGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGTTGATAGATGAGTCTGCGCTGGAGCGTGTTGAGGTAGTGAAAGGTCCATATTCCGTa     >  2:2387084/1‑150 (MQ=255)

                                                                                                                                               tCTAG‑TGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGTTGATAGATGAGTCTGCGCTGGAGCGTGTTGAGGTAGTGAAAGGTCCATATTCCGTa     <  2:1334267/150‑1 (MQ=255)

                                                                                                                                                cTAG‑TGGatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctt    <  2:2132352‑M1/150‑144 (MQ=255)

                                                                                                                                                cTAG‑TGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGTTGATAGATGAGTCTGCGCTGGAGCGTGTTGAGGTAGTGAAAGGTCCATATTCCGTAc    >  1:4947956/1‑150 (MQ=255)

                                                                                                                                                cTAG‑TGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGTTGATAGATGAGTCTGCGCTGGAGCGTGTTGAGGTAGTGAAAGGTCCATATTCCGTAc    >  2:2808162/1‑150 (MQ=255)

                                                                                                                                                 tAG‑TGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGTTGATAGATGAGTCTGCGCTGGAGCGTGTTGAGGTAGTGAAAGGTCCATATTCCGTACt   <  1:2889895/150‑1 (MQ=255)

                                                                                                                                                 tAG‑TGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGTTGATAGATGAGTCTGCGCTGGAGCGTGTTGAGGTAGTGAAAGGTCCATATTCCGTACt   <  1:3600199/150‑1 (MQ=255)

                                                                                                                                                  aG‑TGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGTTGATAGATGAGTCTGCGCTGGAGCGTGTTGAGGTAGTGAAAGGTCCATATTCCGTACTg  <  1:3844813/150‑1 (MQ=255)

                                                                                                                                                  aG‑TGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGTTGATAGATGAGTCTGCGCTGGAGCGTGTTGAGGTAGTGAAAGGTCCATATTCCGTACTg  <  1:1223167/150‑1 (MQ=255)

                                                                                                                                                  aG‑TGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTAAGGAGGTAACTTATCAGAGCGCCGGAGATAATTATGGTGTGTGACTGTTGATAGATGAGTCTGCGCTGGAGCGTGTTGAGGTAGTGAAAGTTCCATATTCCGTACTg  >  2:1860370/1‑150 (MQ=255)

ATCTTTTCCTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAG‑TGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGTTGATAGATGAGTCTGCGCTGGAGCGTGTTGAGGTAGTGAAAGGTCCATATTCCGTACTG  >  CP009273/2063606‑2063901

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.