| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,833,664 | C→A | 79.0% | S30S (TCC→TCA) | yicS → | putative periplasmic protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,833,664 | 0 | C | A | 79.0% | 481.0 / 170.0 | 276 | S30S (TCC→TCA) | yicS | putative periplasmic protein |
| Reads supporting (aligned to +/- strand): ref base C (19/39); new base A (101/117); total (120/156) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.41e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.01e-01 | |||||||||||
Only 100 of 276 total aligned reads displayed.
GATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCACAGGCGTCATTATCAGATGAAGCGTGGGAAAAGTTAATGTTGTCAGATGAAAACAATAAACAACATATACGCGAGGCCATCGTGGCGATGGAAC > CP009273/3833517‑3833809 | ttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGc < 2:3837338‑M1/105‑1 (MQ=255) tatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCAGCa > 2:5025907‑M1/45‑150 (MQ=255) atttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCAGCaa < 2:3070475‑M1/107‑1 (MQ=255) atttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCAGCaa > 2:3409895‑M1/44‑150 (MQ=255) gtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCAGCAAAAgaga < 1:5028284‑M1/113‑1 (MQ=255) gtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCAGCAAAAgaga > 2:4409156‑M1/38‑150 (MQ=255) tgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCAAAAGAGaa < 2:1264938‑M1/114‑1 (MQ=255) atatttgttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCAGCAAAAGAGaaaa < 2:1312677‑M1/116‑1 (MQ=255) tattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCAGCAAAAGAGAAAAc < 2:2655412‑M1/117‑1 (MQ=255) tattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTATTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCAGCAAAAGAGAAAAc > 2:4340172‑M1/34‑150 (MQ=255) attggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCAGCAAAAGAGAAAAcc < 1:1499496‑M1/118‑1 (MQ=255) ttggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCAGCAAAAGAGAAAACCa < 2:1244140‑M1/119‑1 (MQ=255) tggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCAGCAAAAGAGAAAACCAc < 1:4771404‑M1/120‑1 (MQ=255) tggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCAGCAAAAGAGAAAACCAc > 2:4620415‑M1/31‑150 (MQ=255) ttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCAGCAAAAGAGAAAACCACGGt > 2:1323982‑M1/28‑150 (MQ=255) tgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCAGCAAAAGAGAAAACCACGGTa < 2:2044425‑M1/124‑1 (MQ=255) tGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCAAAAGAGAAAACCACGGTAtt < 2:1523159/150‑1 (MQ=255) tGCGTCATTCGATACACAATTGTAAAAGGTTGAATCCATGAAACCAACGCCACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCAAAAGAGAAAACCACGGTAtt < 2:4658666/150‑1 (MQ=255) ctggatattctgggggccattctAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCAGCAAAAGAGAAAACCACGGTATTa > 1:4848536‑M1/24‑150 (MQ=255) ggagattcagggggccagtctAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCAGCAAAAGAGAAAACCACGGTATTACa < 1:4280764‑M1/129‑1 (MQ=255) ggagattcagggggccagtctAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCAGCAAAAGAGAAAACCACGGTATTACa > 2:4970051‑M1/22‑150 (MQ=255) ggagattcagggggccagtctAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCAGCAAAAGAGAAAACCACGGTATTACa < 1:1703433‑M1/129‑1 (MQ=255) cagggggccagtctAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCAGCAAAAGAGAAAACCACGGTATTACAAGATTTa < 2:2535088‑M1/136‑1 (MQ=255) agggggccagtctAATGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCAGCAAAAGAGAAAACCACGGTATTACAAGATTTAc > 1:3360304‑M1/14‑150 (MQ=255) gggggccagtctAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCAGCAAAAGAGAAAACCACGGTATTACAAGATTTACg < 1:3910577‑M1/138‑1 (MQ=255) ggggccagtctAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCAAAAGAGAAAACCACGGTATTACAAGATTTACGt > 1:3013912‑M1/12‑150 (MQ=255) ctAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCAGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGc < 2:1546866‑M1/148‑1 (MQ=255) tAAAGTTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCAGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCa > 1:2344916‑M1/2‑150 (MQ=255) ggTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGcc < 1:296947/150‑1 (MQ=255) gTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCAGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCca < 2:2575704/150‑1 (MQ=255) gTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCAGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCca < 2:4259331/150‑1 (MQ=255) aaTCCATGAAACCAACGACACTTCTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCAGCCAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCACAgg > 2:3820329/1‑150 (MQ=255) aaTCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCAGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCACAgg > 2:2764210/1‑150 (MQ=255) aTCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCACAGGc > 1:929390/1‑150 (MQ=255) tCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCACAGGCg < 2:703020/150‑1 (MQ=255) cATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCAGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCACAGGCGTc > 2:2794509/1‑150 (MQ=255) aTGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCAGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCACAGGCGTCa > 1:2104653/1‑150 (MQ=255) tGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCAGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCACAGGCGTCAt < 2:3663106/150‑1 (MQ=255) aaCCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCACAGGCGTCATTAt < 1:4958020/150‑1 (MQ=255) aCCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCAGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCACAGGCGTCATTATc > 2:1612904/1‑150 (MQ=255) aCCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCAGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCACAGGCGTCATTATc > 2:2594117/1‑150 (MQ=255) cAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCAGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCACAGGCGTCATTATCAg < 2:2392537/150‑1 (MQ=255) aaCGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCAGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCATGCCACAGGCGTCATTATCAGa > 2:4494003/1‑150 (MQ=255) aCGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCAGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCACAGGCGTCATTATCAGAt > 1:3099135/1‑150 (MQ=255) cGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCAGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCACAGGCGTCATTATCAGATg < 2:3992710/150‑1 (MQ=255) cGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCAGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCACAGGCGTCATTATCAGATg > 1:2876566/1‑150 (MQ=255) cacTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCACAGGCGTCATTATCAGATGAAg < 2:3286415/150‑1 (MQ=255) actactGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCAGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCACAGGCGTCATTATCAGATGAAGc < 1:5111364/150‑1 (MQ=255) actactGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCAGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCACAGGCGTCATTATCAGATGAAGc > 2:4180783/1‑150 (MQ=255) ctGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCAGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCACAGGCGTCATTATCAGATGAAGCGTgg > 1:1591486/1‑150 (MQ=255) ctGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCATTTTAGCTCACTGCAGTCAGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCACAGGCGTCATTATCAGATGAAGCGTgg < 2:3889312/150‑1 (MQ=255) gCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCAGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCACAGGCGTCATTATCAGATGAAGCGTGGGa < 2:789414/150‑1 (MQ=255) ttATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCAGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCACAGGCGTCATTATCAGATGAAGCGTGGGaaa < 1:3755823/150‑1 (MQ=255) tttCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCAGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCACAGGCGTCATTATCAGATGAAGCGTGGGAAAAGtt < 1:1344172/150‑1 (MQ=255) ttCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCACAGGCGTCATTATCAGATGAAGCGTGGGAAAAGTTa < 2:1853263/150‑1 (MQ=255) cACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCACAGGCGTCATTATCAGATGAAGCGTGGGAAAAGTTAAt > 2:3146226/1‑150 (MQ=255) cACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCAGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCACAGGCGTCATTATCAGATGAAGCGTGGGAAAAGTTAAt > 2:817380/1‑150 (MQ=255) ttttttCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCACAGGCGTCATTATCAGATGAAGCGTGGGAAAAGTTAAtgtt < 2:2300640/150‑1 (MQ=255) tttttCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCAGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCACAGGCGTCATTATCAGATGAAGCGTGGGAAAAGTTAAtgttg < 2:1767353/150‑1 (MQ=255) ttttCGCTATTCCAGTCATCGTATACGCCGAGTCTCCTTTTAGCTCACTGCAGTCAGCAAAAGAGAAAACCACTGTATTACAAGATTTACGTAAAATTTGCACGCCACAGGCGTCATTATCAGATGAAGCGTGGGAAAAGTTAAtgttgt < 1:3580523/150‑1 (MQ=255) ttCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCAGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCACAg < 1:1088736/108‑1 (MQ=255) ttCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCAGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCACAg > 2:1088736/1‑108 (MQ=255) ttCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCAGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCACAGGCGTCATTATCAGATGAAGCGTGGGAAAAGTTAATGTTGTCa < 1:2786904/150‑1 (MQ=255) gCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCACAGGCGTCATTATCAGATGAAGCGTGGGAAAAGTTAATGTTGTCAGAt < 1:701148/150‑1 (MQ=255) gCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCAGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCACAGGCGTCATTATCAGATGAAGCGTGGGAAAAGTTAATGTTGTCAGAt > 1:1248628/1‑150 (MQ=255) tGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCAGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCACAGGCGTCATTATCAGATGAAGCGTGGGAAAAGTTAATGTTGTCAGATGaaa > 1:4215089/1‑150 (MQ=255) gCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCAGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCACAGGCGTCATTATCAGATGAAGCGTGGGAAAAGTTAATGTTGTCAGATGaaaa < 2:2075326/150‑1 (MQ=255) ccAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCAGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCACAGGCGTCATTATCAGATGAAGCGTGGGAAAAGTTAATGTTGTCAGATGACAAc > 1:43790/1‑150 (MQ=255) cAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCACAGGCGTCATTATCAGATGAAGCGTGGGAAAAGTTAATGTTGTCAGATGAAAACa > 2:3663398/1‑150 (MQ=255) cAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCAGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCACAGGCGTCATTATCAGATGAAGCGTGGGAAAAGTTAATGTTGTCAGATGAAAACa > 2:4088746/1‑150 (MQ=255) cAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCAGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCACAGGCGTCATTATCAGATGAAGCGTGGGAAAAGTTAATGTTGTCAGATGAAAACa < 2:2000098/150‑1 (MQ=255) cAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCAGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCACAGGCGTCATTATCAGATGAAGCGTGGGAAAAGTTAATGTTGTCAGATGAAAACa > 2:1149664/1‑150 (MQ=255) aGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCAGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCACAGGCGTCATTATCAGATGAAGCGTGGGAAAAGTTAATGTTGTCAGATGAAAACaa > 1:1013818/1‑150 (MQ=255) aGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCAGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCACAGGCGTCATTATCAGATGAAGCGTGGGAAAAGTTAATGTTGTCAGATGAAAACaa > 1:2704826/1‑150 (MQ=255) aGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCAGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCACAGGCGTCATTATCAGATGAAGCGTGGGAAAAGTTAATGTTGTCAGATGAAAACaa > 2:3344898/1‑150 (MQ=255) cATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCAGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCACAGGCGTCATTATCAGATGAAGCGTGGGAAAAGTTAATGTTGTCAGATGAAAACAATaa < 1:4906354/150‑1 (MQ=255) tCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCAGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCACAGGCGTCATTATCAGATGAAGCGTGGGAAAAGTTAATGTTGTCAGATGAAAACAATAaac < 2:983654/150‑1 (MQ=255) tCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCAGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCACAGGCGTCATTATCAGATGAAGCGTGGGAAAAGTTAATGTTGTCAGATGAAAACAATAaac < 2:3564086/150‑1 (MQ=255) cGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCAGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCACAGGCGTCATTATCAGATGAAGCGTGGGAAAAGTTAATGTTGTCAGATGAAAACAATAaaca > 1:2467761/1‑150 (MQ=255) cGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCAGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCACAGGCGTCATTATCAGATGAAGCGTGGGAAAAGTTAATGTTGTCAGATGAAAACAATAaaca < 1:2044425/150‑1 (MQ=255) gTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCAGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCACAGGCGTCATTATCAGATGAAGCGTGGGAAAAGTTAATGTTGTCAGATGAAAACAATAaacaa > 1:1852226/1‑150 (MQ=255) tataCGCCGAGTCGCCTTTTAGCTCACTGCAGTCAGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCACAGGCGTCATTATCAGATGAAGCGTGGGAAAAGTTAATGTTGTCAGATGAAAACAATAaacaac < 2:1491343/150‑1 (MQ=255) anaCGCCGAGTCGCCTTTTAGCTCACTGCAGTCAGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCACAGGCGTCATTATCAGATGAAGCGTGGGAAAAGTTATTGTTGTCAGATGAAGAGAATAAgaaaca > 1:4820853/1‑150 (MQ=255) gCCGAGTCGCCTTTTAGCTCACTGCAGTCAGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCACAGGCGTCATTATCAGATGAAGCGTGGGAAAAGTTAATGTTGTCAGATGAAAACAATAAACAACAtata < 1:3222937/150‑1 (MQ=255) gAGTCGCCTTTTAGCTCACTGCAGTCAGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCACAGGCGTCATTATCAGATGAAGCGTGGGAAAAGTTAATGTTGTCAGATGAAAACAATAAACAACATATAcgc < 1:2655412/150‑1 (MQ=255) aGTCGCCTTTTAGCTCACTGCAGTCCGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCACAGGCGTCATTATCAGATGAAGCGTGGGAAAAGTTAATGTTGTCAGATGAAAACAATAAACAACATATAcgcg < 1:861226/150‑1 (MQ=255) aGTCGCCTTTTAGCTCACTGCAGTCAGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCACAGGCGTCATTATCAGATGAAGCGTGGGAAAAGTTAATGTTGTCAGATGAAAACAATAAACAACATATAcgcg < 1:4637369/150‑1 (MQ=255) aGTCGCCTTTTAGCTCACTGCAGTCAGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCACAGGCGTCATTATCAGATGAAGCGTGGGAAAAGTTAATGTTGTCAGATGAAAACAATAAACAACATATAcgcg < 1:130995/150‑1 (MQ=255) cTTTTAGCTCACTGCAGTCAGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCACAGGCGTCATTATCAGATGAAGCGTGGGAAAAGTTAATGTTGTCAGATGAAAACAATAAACAACATATACGCGAGGCCa > 2:1288975/1‑150 (MQ=255) aGCTCACTGCAGTCAGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCACAGGCGTCATTATCAGATGAAGCGTGGGAAAAGTTAATGTTGTCAGATGAAAACAATAAACAACATATACGCGAGGCCATCGTg < 1:3824277/150‑1 (MQ=255) tCACTGCAGTCCGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCACAGGCGTCATTATCAGATGAAGCGTGGGAAAAGTTAATGTTGTCAGATGAAAACAATAAACAACATATACGCGAGGCCATCGTGGCg < 1:1772275/150‑1 (MQ=255) tCACTGCAGTCAGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCACAGGCGTCATTATCAGATGAAGCGTGGGAAAAGTTAATGTTGTCAGATGAAAACAATAAACAACATATACGCGAGGCCATCGTGGCg < 2:5119439/150‑1 (MQ=255) tcTGCAGTCAGAAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACTCCTCAGGCGTCCTTATCAGAGGAAGCGTGGGAAAAGTTAATGTTGTCAGATGAAAAAAATAAACAACATATACGCGAGGCCATCGTGGCGAt < 1:1880051/149‑1 (MQ=255) aCTGCAGTCCGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCACAGGCGTCATTATCAGATGAAGCGTGGGAAAAGTTAATGTTGTCAGATGAAAACAATAAACAACATATACGCGAGGCCATCGTGGCGAt > 1:1951346/1‑150 (MQ=255) aCTGCAGTCAGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCACAGGCGTCATTATCAGATGAAGCGTGGGAAAAGTTAATGTTGTCAGATGAAAACAATAAACAACATATACGCGAGGCCATCGTGGCGAt < 1:1415692/150‑1 (MQ=255) aCTGCAGTCAGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCACAGGCGTCATTATCAGATGAAGCGTGGGAAAAGTTAATGTTGTCAGATGAAAACAATAAACAACATATACGCGAGGCCATCGTGGCGAt < 1:4494358/150‑1 (MQ=255) cTGCAGTCAGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCACAGGCGTCATTATCAGATGAAGCGTGGGAAAAGTTAATGTTGTCAGATGAAAACAATAAACAACATATACGCGAGGCCATCGTGGCGATg < 1:2594117/150‑1 (MQ=255) cTGCAGTCAGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCACAGGCGTCATTATCAGATGAAGCGTGGGAAAAGTTAATGTTGTCAGATGAAAACAATAAACAACATATACGCGAGGCCATCGTGGCGATg < 2:2100529/150‑1 (MQ=255) gCAGTCCGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCACAGGCGTCATTATCAGATGAAGCGTGGGAAAAGTTAATGTTGTCAGATGAAAACAATAAACAACATATACGCGAGGCCATCGTGGCGATGGa > 2:2983008/1‑150 (MQ=255) cAGTCAGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCACAGGCGTCATTATCAGATGAAGCGTGGGAAAAGTTAATGTTGTCAGATGAAAACAATAAACAACATATACGCGAGGCCATCGTGGCGATGGaa > 1:114528/1‑150 (MQ=255) | GATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCACAGGCGTCATTATCAGATGAAGCGTGGGAAAAGTTAATGTTGTCAGATGAAAACAATAAACAACATATACGCGAGGCCATCGTGGCGATGGAAC > CP009273/3833517‑3833809 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |