| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,221,214 | C→A | 93.4% | intergenic (+60/+73) | rluF → / ← yjbD | 23S rRNA pseudouridine(2604) synthase/DUF3811 family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,221,214 | 0 | C | A | 93.4% | 817.9 / 40.5 | 293 | intergenic (+60/+73) | rluF/yjbD | 23S rRNA pseudouridine(2604) synthase/DUF3811 family protein |
| Reads supporting (aligned to +/- strand): ref base C (10/10); new base A (128/145); total (138/155) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.20e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01 | |||||||||||
Only 100 of 294 total aligned reads displayed.
AAGATGGAAAAAACGGCGGAAAAAGGCGGTCGCCCGGCGTCCAACGGTAAGCGTTTTACCTCGCCGGGGCGTAAAAAGAAGGGGCGCTGATTAACGCCTCAGACTGATGAAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTCGGGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTCACACTGACGAGTGAAAATCTCAGGCGTTGATTGTGGATTAGCGCCTGCCGCGCGTCGACGTATTTGCTGACCAGCTAAATGACGCTTCAGGATCCGGTTTATAAGCCTGCT > CP009273/4221065‑4221360 | tGGAAAAAACGGCGGAAAAAGGCGGTCGCCCGGCGTCCAACGGTAAGCGTTTTACCTCGCCGGGGCGTAAAAAGAAGGGGCGCTGATTAACGCCTCAGACTGATGAAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTAGGGa > 2:2202082/1‑150 (MQ=255) ggAAAAAACGGCGGAAAAAGGCGGTCGCCCGGCGTCCAACGGTAAGCGTTTTACCTCGCCGGGGCGTAAAAAGAAGGGGCGCTGATTAACGCCTCAGACTGATGAAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTAGGGaa < 1:3733405/150‑1 (MQ=255) aaaCGGCGGAAAAAGGCGGTCGCCCGGCGTCCAACGGTAAGCGTTTTACCTCGCCGGGGCGTAAAAAGAAGGGGCGCTGATTAACGCCTCAGACTGATGAAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAggg > 2:4950715/1‑150 (MQ=255) aaCGGCGGAAAAAGGCGGTCGCCCGGCGTCCAACGGTAAGCGTTTTACCTCGCCGGGGCGTAAAAAGAAGGGGCGCTGATTAACGCCTCAGACTGATGAAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGt > 1:389651/1‑150 (MQ=255) aaCGGCGGAAAAAGGCGGTCGCCCGGCGTCCAACGGTAAGCGTTTTACCTCGCCGGGGCGTAAAAAGAAGGGGCGCTGATTAACGCCTCAGACTGATGAAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGt > 1:2848473/1‑150 (MQ=255) aCGGCGGAAAAAGGCGGTCGCCCGGCGTCCAACGGTAAGCGTTTTACCTCGCCGGGGCGTAAAAAGAAGGGGCGCTGATTAACGCCTCAGACTGATGAAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGtt > 1:2481699/1‑150 (MQ=255) cggcggAAAAAGGCGGTCGCCCGGCGTCCAACGGTAAGCGTTTTACCTCGCCGGGGCGTAAAAAGAAGGGGCGCTGATTAACGCCTCAGACTGATGAAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTa < 2:3033756/150‑1 (MQ=255) ggcggAAAAAGGCGGTCGCCCGGCGTCCAACGGTAAGCGTTTTACCTCGCCGGGGCGTAAAAAGAAGGGGCGCTGATTAACGCCTCAGACTGATGAAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAg < 1:874439/150‑1 (MQ=255) ggcggAAAAAGGCGGTCGCCCGGCGTCCAACGGTAAGCGTTTTACCTCGCCGGGGCGTAAAAAGAAGGGGCGCTGATTAACGCCTCAGACTGATGAAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAg < 2:2814724/150‑1 (MQ=255) ggcggAAAAAGGCGGTCGCCCGGCGTCCAACGGTAAGCGTTTTACCTCGCCGGGGCGTAAAAAGAAGGGGCGCTGATTAACGCCTCAGACTGATGAAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAg < 2:2929551/150‑1 (MQ=255) cggAAAAAGGCGGTCGCCCGGCGTCCAACGGTAAGCGTTTTACCTCGCCGGGGCGTAAAAAGAAGGGGCGCTGATTAACGCCTCAGACTGATGAAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAggg > 1:2378019/1‑150 (MQ=255) ggAAAAAGGCGGTCGCCCGGCGTCCAACGGTAAGCGTTTTACCTCGCCGGGGCGTAAAAAGAAGGGGCGCTGATTAACGCCTCAGACTGATGAAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTCGGGAAAAGGGTTAGGGt > 1:1066514/1‑150 (MQ=255) aaaaGGCGGTCGCCCGGCGTCCAACGGTAAGCGTTTTACCTCGCCGGGGCGTAAAAAGAAGGGGCGCTGATTAACGCCTCAGACTGATGAAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCGGAGGGAACAGggtgagggtgag > 2:910821/1‑150 (MQ=255) aaGGCGGTCGCCCGGCGTCCAACGGTAAGCGTTTTACCTCGCCGGGGCGTAAAAAGAAGGGGCGCTGATTAACGCCTCAGACTGATGAAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAGGGTGAggg < 2:4250314/150‑1 (MQ=255) aaGGCGGTCGCCCGGCGTCCAACGGTAAGCGTTTTACCTCGCCGGGGCGTAAAAAGAAGGGGCGCTGATTAACGCCTCAGACTGATGAAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAGGGTGAggg > 1:1296129/1‑150 (MQ=255) aGGCGGTCGCCCGGCGTCCAACGGTAAGCGTTTTACCTCGCCGGGGCGTAAAAAGAAGGGGCGCTGATTAACGCCTCAGACTGATGAAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAGGGTGAgggg < 1:1935929/150‑1 (MQ=255) cGGTCGCCCGGCGTCCAACGGTAAGCGTTTTACCTCGCCGGGGCGTAAAAAGAAGGGGCGCTGATTAACGCCTCAGACTGATGAAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGaaa > 2:4052617/1‑150 (MQ=255) gCCCGGCGTCCAACGGTAAGCGTTTTACCTCGCCGGGGCGTAAAAAGAAGGGGCGCTGATTAACGCCTCAGACTGATGAAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGACAATtgt > 1:3348456/1‑150 (MQ=255) gCCCGGCGTCCAACGGTAAGCGTTTTACCTCGCCGGGGCGTAAAAAGAAGGGGCGCTGATTAACGCCTCAGACTGATGAAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAATtgt > 2:3568344/1‑150 (MQ=255) gCCCGGCGTCCAACGGTAAGCGTTTTACCTCGCCGGGGCGTAAAAAGAAGGGGCGCTGATTAACGCCTCAGACTGATGAAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAATtgt > 2:1931590/1‑150 (MQ=255) gCCCGGCGTCCAACGGTAAGCGTTTTACCTCGCCGGGGCGTAAAAAGAAGGGGCGCTGATTAACGCCTCAGACTGATGAAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAATtgt > 1:396903/1‑150 (MQ=255) cccGGCGTCCAACGGTAAGCGTTTTACCTCGCCGGGGCGTAAAAAGAAGGGGCGCTGATTAACGCCTCAGACTGATGAAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAATtgtg < 1:3834739/150‑1 (MQ=255) ccGGCGTCCAACGGTAAGCGTTTTACCTCGCCGGGGCGTAAAAAGAAGGGGCGCTGATTAACGCCTCAGACTGATGAAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAATTgtgt < 2:439165/150‑1 (MQ=255) ccGGCGTCCAACGGTAAGCGTTTTACCTCGCCGGGGCGTAAAAAGAAGGGGCGCTGATTAACGCCTCAGACTGATGAAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAATTgtgt > 2:4788592/1‑150 (MQ=255) gCGTCCAACGGTAAGCGTTTTACCTCGCCGGGGCGTAAAAAGAAGGGGCGCTGATTAACGCCTCAGACTGATGAAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTca < 2:3530851/150‑1 (MQ=255) cGTCCAACGGTAAGCGTTTTACCTCGCCGGGGCGTAAAAAGAAGGGGCGCTGATTAACGCCTCAGACTGATGAAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTcac > 2:2697635/1‑150 (MQ=255) gTCCAACGGTAAGCGTTTTACCTCGCCGGGGCGTAAAAAGAAGGGGCGCTGATTAACGCCTCAGACTGATGAAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTcaca > 2:457472/1‑150 (MQ=255) gTCCAACGGTAAGCGTTTTACCTCGCCGGGGCGTAAAAAGAAGGGGCGCTGATTAACGCCTCAGACTGATGAAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTcaca < 2:3971617/150‑1 (MQ=255) cAACGGTAAGCGTTTTACCTCGCCGGGGCGTAAAAAGAAGGGGCGCTGATTAACGCCTCAGACTGATGAAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTCACACTg > 2:2966053/1‑150 (MQ=255) cAACGGTAAGCGTTTTACCTCGCCGGGGCGTAAAAAGAAGGGGCGCTGATTAACGCCTCAGACTGATGAAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTCACACTg < 1:4209728/150‑1 (MQ=255) cAACGGTAAGCGTTTTACCTCGCCGGGGCGTAAAAAGAAGGGGCGCTGATTAACGCCTCAGACTGATGAAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTCACACTg < 1:4570648/150‑1 (MQ=255) aaCGGTAAGCGTTTTACCTCGCCGGGGCGTAAAAAGAAGGGGCGCTGATTAACGCCTCAGACTGATGAAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTCACACTGa < 2:4176944/150‑1 (MQ=255) aaCGGTAAGCGTTTTACCTCGCCGGGGCGTAAAAAGAAGGGGCGCTGATTAACGCCTCAGACTGATGAAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTCACACTGa < 2:1598920/150‑1 (MQ=255) aaCGGTAAGCGTTTTACCTCGCCGGGGCGTAAAAAGAAGGGGCGCTGATTAACGCCTCAGACTGATGAAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTCACACTGa > 1:723736/1‑150 (MQ=255) aCGGTAAGCGTTTTACCTCGCCGGGGCGTAAAAAGAAGGGGCGCTGATTAACGCCTCAGACTGATGAAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTCACACTGAc > 2:4723156/1‑150 (MQ=255) gTAAGCGTTTTACCTCGCCGGGGCGTAAAAAGAAGGGGCGCTGATTAACGCCTCAGACTGATGAAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTCACACTGACGAg > 2:1380565/1‑150 (MQ=255) tAAGCGTTTTACCTCGCCGGGGCGTAAAAAGAAGGGGCGCTGATTAACGCCTCAGACTGATGAAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTCACACTGACGAGt < 2:2368879/150‑1 (MQ=255) ttttACCTCGCCGGGGCGTAAAAAGAAGGGGCGCTGATTAACGCCTCAGACTGATGAAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTAGGGACAAGGGTTAGGGTGAGGGGAAAAGTGTGTTCACACTGACGAGTGAAAAt > 2:288216/1‑150 (MQ=255) ttACCTCGCCGGGGCGTAAAAAGAAGGGGCGCTGATTAACGCCTCAGACTGATGAAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTCACACTGACGAGTGAAAAtct < 1:2506181/150‑1 (MQ=255) tACCTCGCCGGGGCGTAAAAAGAAGGGGCGCTGATTAACGCCTCAGACTGATGAAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTCACACTGACGAGTGAAAAtctc > 1:1047302/1‑150 (MQ=255) ccTCGCCGGGGCGTAAAAAGAAGGGGCGCTGATTAACGCCTCAGACTGATGAAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTCACACTGACGAGTGAAAATCTCAg < 2:529506/150‑1 (MQ=255) tCGCCGGGGCGTAAAAAGAAGGGGCGCTGATTAACGCCTCAGACTGATGAAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTCACACTGACGAGTGAAAATCTCAGGc < 1:210714/150‑1 (MQ=255) cGGGGCGTAAAAAGAAGGGGCGCTGATTAACGCCTCAGACTGATGAAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGACAATTGTGTTCACACTGACGAGTGAAAATCTCAGGCGTTg > 1:3400834/1‑150 (MQ=255) cGGGGCGTAAAAAGAAGGGGCGCTGATTAACGCCTCAGACTGATGAAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTCACACTGACGAGTGAAAATCTCAGGCGTTg > 2:3727155/1‑150 (MQ=255) cGTAAAAAGAAGGGGCGCTGATTAACGCCTCAGACTGATGAAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTAGTGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTCACACTGACGAGTGAAAATCTCAGGCGTTGATtgt > 1:4431223/1‑150 (MQ=255) cGTAAAAAGAAGGGGCGCTGATTAACGCCTCAGACTGATGAAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTCACACTGACGAGTGAAAATCTCAGGCGTTGATtgt < 2:2999264/150‑1 (MQ=255) aaaaaGAAGGGGCGCTGATTAACGCCTCAGACTGATGAAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTCACACTGACGAGTGAAAATCTCAGGCGTTGATTGTGGa < 2:41794/150‑1 (MQ=255) aaaaGAAGGGGCGCTGATTAACGCCTCAGACTGATGAAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTCACACTGACGAGTGAAAATCTCAGGCGTTGATTGTGGAt > 1:1630548/1‑150 (MQ=255) aaaGAAGGGGCGCTGATTAACGCCTCAGACTGATGAAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTCACACTGACGAGTGAAAATCTCAGGCGTTGATTGTGGAtt < 1:1503497/150‑1 (MQ=255) aagaagGGGCGCTGATTAACGCCTCAGACTGATGAAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTCACACTGACGAGTGAAAATCTCAGGCGTTGATTGTGGATTa < 2:4088996/150‑1 (MQ=255) aagGGGCGCTGATTAACGCCTCAGACTGATGAAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTCGGGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTCACACTGACGAGTGAAAATCTCAGGCGTTGATTGTGGATTAgcg > 1:1001274/1‑150 (MQ=255) gcgcTGATTAACGCCTCAGACTGATGAAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTCACACTGACGAGTGAAAATCTCAGGCGTTGATTGTGGATTAGCGCCTGc < 1:1183428/150‑1 (MQ=255) gcTGATTAACGCCTCAGACTGATGAAAACGGCCCAANAGTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTCACACTGACGAGTGAAAATCTCAGGCGTTGATTGTGGATTAGCGCCTGCcg > 1:2674378/1‑150 (MQ=255) tGATTAACGCCTCAGACTGATGAAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTCACACTGACGAGTGAAAATCTCAGGCGTTGATTGTGGATTAGCGCCTGCcgcg > 1:4826528/1‑150 (MQ=255) aTTAACGCCTCAGACTGATGAAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTCACACTGACGAGTGAAAATCTCAGGCGTTGATTGTGGATTAGCGCCTGCcgcgcg > 2:1997300/1‑150 (MQ=255) aaCGCCTCAGACTGATGAAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTCACACTGACGAGTGAAAATCTCAGGCGTTGATTGTGGATTAGCGCCTGCCGCGCGTCg > 2:1876681/1‑150 (MQ=255) aaCGCCTCAGACTGATGAAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTCACACTGACGAGTGAAAATCTCAGGCGTTGATTGTGGATTAGCGCCTGCCGCGCGTCg < 1:4654135/150‑1 (MQ=255) aaCGCCTCAGACTGATGAAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTCACACTGACGAGTGAAAATCTCAGGCGTTGATTGTGGATTAGCGCCTGCCGCGCGTCg > 2:1092460/1‑150 (MQ=255) aaCGCCTCAGACTGATGAAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTCACACTGACGAGTGAAAATCTCAGGCGTTGATTGTGGATTAGCGCCTGCCGCGCGTCg > 2:3672735/1‑150 (MQ=255) cGCCTCAGACTAATGAAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTCACACTGACGAGTGAAAATCTCAGGCGTTGATTGTGGATTAGCGCCTGCCGCGCGTCGAc < 2:2328993/150‑1 (MQ=255) ccTCAGACTGATGAAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTCACACTGACGAGTGAAAATCTCAGGCGTTGATTGTGGATTAGCGCCTGCCGCGCGTCGACGt > 1:2996268/1‑150 (MQ=255) cAGACTGATGAAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTCACACTGACGAGTGAAAATCTCAGGCGTTGATTGTGGATTAGCGCCTGCCGCGCGTCGACGTAtt > 1:403517/1‑150 (MQ=255) cAGACTGATGAAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTCACACTGACGAGTGAAAATCTCAGGCGTTGATTGTGGATTAGCGCCTGCCGCGCGTCGACGTAtt > 2:1476664/1‑150 (MQ=255) aCTGATGAAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTCACACTGACGAGTGAAAATCTCAGGCGTTGATTGTGGATTAGCGCCTGCCGCGCGTCGACGTATTTGc < 2:116696/150‑1 (MQ=255) cTGATGAAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTCACACTGACGAGTGAAAATCTCAGGCGTTGATTGTGGATTAGCGCCTGCCGCGCGTCGACGTATTTGCt < 2:2569187/150‑1 (MQ=255) cTGATGAAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTCACACTGACGAGTGAAAATCTCAGGCGTTGATTGTGGATTAGCGCCTGCCGCGCGTCGACGTATTTGCt < 2:3123473/150‑1 (MQ=255) tgatgaAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTCACACTGACGAGTGAAAATCTCAGGCGTTGATTGTGGATTAGCGCCTGCCGCGCGTCGACGTATTTGCTg > 2:4881409/1‑150 (MQ=255) tgatgaAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTCACACTGACGAGTGAAAATCTCAGGCGTTGATTGTGGATTAGCGCCTGCCGCGCGTCGACGTATTTGCTg > 1:17499/1‑150 (MQ=255) gaAAACGGCCCAACAGTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTCACACTGACGAGTGAAAATCTCAGGCGTTGATTGTGGATTAGCGCCTGCCGCGCGTCGACGTATTTGCTGACCa < 2:4431221/150‑1 (MQ=255) aaaaCGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTCACACTGACGAGTGAAAATCTCAGGCGTTGATTGTGGATTAGCGCCTGCCGCGCGTCGACGTATTTGCTGACCAg < 2:4194642/150‑1 (MQ=255) aaaCGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTCGGGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTCACACTGACGAGTGAAAATCTCAGGCGTTGATTGTGGATTAGCGCCTGCCGCGCGTCGACGTATTTGCTGACCAGc < 2:4972563/150‑1 (MQ=255) aCGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTCACACTGACGAGTGAAAATCTCAGGCGTTGATTGTGGATTAGCGCCTGCCGCGCGTCGACGTATTTGCTGACCAGCTa < 1:2057484/150‑1 (MQ=255) aCGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTCACACTGACGAGTGAAAATCTCAGGCGTTGATTGTGGATTAGCGCCTGCCGCGCGTCGACGTATTTGCTGACCAGCTa < 1:5021010/150‑1 (MQ=255) ggCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTCACACTGACGAGTGAAAATCTCAGGCGTTGATTGTGGATTAGCGCCTGCCGCGCGTCGACGTATTTGCTGACCAGCTaaa > 2:4915370/1‑150 (MQ=255) ggCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTCACACTGACGAGTGAAAATCTCAGGCGGTGATTGTGGATTAGCGCCTGCCGCGCGTCGACGTATTTGCTGACCAGCTaaa > 2:3906291/1‑150 (MQ=255) aaaaGTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTCACACTGACGAGTGAAAATCTCAGGCGTTGATTGTGGATTAGCGCCTGCCGCGCGTCGACGTATTTGCTGACCAGCTAAATGACg > 2:760169/1‑150 (MQ=255) aaaGTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTCACACTGACGAGTGAAAATCTCAGGCGTTGATTGTGGATTAGCGCCTGCCGCGCGTCGACGTATTTGCTGACCAGCTAAATGACGc > 2:640380/1‑150 (MQ=255) aaGTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTCACACTGACGAGTGAAAATCTCAGGCGTTGATTGTGGATTAGCGCCTGCCGCGCGTCGACGTATTTGCTGACCAGCTAAATGACGCt < 2:1260201/150‑1 (MQ=255) aaGTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAAATGTGTTCACACAGACGAGTGAAAATCTCAGGCGTTGATTGTGGATTAGCGCCTGCCGCGCGACGACGTATTTGCTGACCAGCTAAATGACGCt > 1:4718529/1‑150 (MQ=255) aGTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTCACACTGACGAGTGAAAATCTCAGGCGTTGATTGTGGATTAGCGCCTGCCGCGCGTCGACGTATTTGCTGACCAGCTAAATGACGCtt > 1:3566219/1‑150 (MQ=255) aGTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTCACACTGACGAGTGAAAATCTCAGGCGTTGATTGTGGATTAGCGCCTGCCGCGCGTCGACGTATTTGCTGACCAGCTAAATGACGCtt < 2:2481699/150‑1 (MQ=255) aGTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTCACACTGACGAGTGAAAATCTCAGGCGTTGATTGTGGATTAGCGCCTGCCGCGCGTCGACGTATTTGCTGACCAGCTAAATGACGCtt < 1:4121991/150‑1 (MQ=255) gTGCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTCACACTGACGAGTGAAAATCTCAGGCGTTGATTGTGGATTAGCGCCTGCCGCGCGTCGACGTATTTGCTGACCAGCTAAATGACGCTTc < 1:344399/150‑1 (MQ=255) gTGCCCGGACAGTCCCCTCGCACCTTAGTGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTCACACTGACTAGTGAAAATCTCAGGAGTTGATTGTGGATTAGCGCCTGCCGCGCGTCGACGTATTTGCGGACCAGCTAAATGACGCTTc < 2:3078977/150‑1 (MQ=255) gCCCGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTCACACTGACGAGTGAAAATCTCAGGCGTTGATTGTGGATTAGCGCCTGCCGCGCGTCGACGTATTTGCTGACCAGCTAAATGACGCTTCAg < 1:559273/150‑1 (MQ=255) cccGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTCACACTGACGAGTGAAAATCTCAGGCGTTGATTGTGGATTAGCGCCTGCCGCGCGTCGACGTATTTGCTGACCAGCTAAATGACGCTTCAgg < 2:3009574/150‑1 (MQ=255) ccGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTCACACTGACGAGTGAAAATCTCAGGCGTTGATTGTGGATTAGCGCCTGCCGCGCGTCGACGTATTTGCTGACCAGCTAAATGACGCTTCAGGa > 2:2147166/1‑150 (MQ=255) cGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTCACACTGACGAGTGAAAATCTCAGGCGTTGATTGTGGATTAGCGCCTGCCGCGCGTCGACGTATTTGCTGACCAGCTAAATGACGCTTCAGGAt > 2:3430654/1‑150 (MQ=255) cGGACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTCACACTGACGAGTGAAAATCTCAGGCGTTGATTGTGGATTAGCGCCTGCCGCGCGTCGACGTATTTGCTGACCAGCTAAATGACGCTTCAGGAt > 1:4357754/1‑150 (MQ=255) ggACAGTCCCCTCGCCCCTTCGGGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTCACACTGACGAGTGAAAATCTCAGGCGTTGATTGTGGATTAGCGCCTGCCGCGCGTCGACGTATTTGCTGACCAGCTAAATGACGCTTCAGGATc < 2:1066488/150‑1 (MQ=255) ggACAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTCACACTGACGAGTGAAAATCTCAGGCGTTGATTGTGGATTAGCGCCTGCCGCGCGTCGACGTATTTGCTGACCAGCTAAATGACGCTTCAGGATc > 2:2454367/1‑150 (MQ=255) aCAGTCCCCTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTCACACTGACGAGTGAAAATCTCAGGCGTTGATTGTGGATTAGCGCCTGCCGCGCGTCGACGTATTTGCTGACCAGCTAAATGACGCTTCAGGATCCg > 2:33893/1‑150 (MQ=255) tCCCCTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTCACACTGACGAGTGAAAATCTCAGGCGTTGATTGTGGATTAGCGCCTGCCGCGCGTCGACGTATTTGCTGACCAGCTAAATGACGCTTCAGGATCCGGttt < 1:4723162/150‑1 (MQ=255) ccccTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTCACACTGACGAGTGAAAATCTCAGGCGTTGATTGTGGATTAGCGCCTGCCGCGCGTCGACGTATTTGCTGACCAGCTAAATGACGCTTCAGGATCCGGTTta > 1:3254284/1‑150 (MQ=255) ccccTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTCACACTGACGAGTGAAAATCTCAGGCGTTGATTGTGGATTAGCGCCTGCCGCGCGTCGACGTATTTGCTGACCAGCTAAATGACGCTTCAGGATCCGGTTta > 1:3143178/1‑150 (MQ=255) cccTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTCACACTGACGAGTGAAAATCTCAGGCGTTGATTGTGGATTAGCGCCTGCCGCGCGTCGACGTATTTGCTGACCAGCTAAATGACGCTTCAGGATCCGGTTtat < 2:3275074/150‑1 (MQ=255) cTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTCACACTGACGAGTGAAAATCTCAGGCGTTGATTGTGGATTAGCGCCTGCCGCGCGTCGACGTATTTGCTGACCAGCTAAATGACGCTTCAGGATCCGGTTTATaa > 1:1713246/1‑150 (MQ=255) cTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTCACACTGACGAGTGAAAATCTCAGGCGTTGATTGTGGATTAGCGCCTGCCGCGCGTCGACGTATTTGCTGACCAGCTAAATGACGCTTCAGGATCCGGTTTATaa < 1:2221336/150‑1 (MQ=255) cTCGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTCACACTGACGAGTGAAAATCTCAGGCGTTGATTGTGGATTAGCGCCTGCCGCGCGTCGACGTATTTGCTGACCAGCTAAATGACGCTTCAGGATCCGGTTTATaa > 2:1689986/1‑150 (MQ=255) cGCCCCTTAGGGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTCACACTGACGAGTGAAAATCTCAGGCGTTGATTGTGGATTAGCGCCTGCCGCGCGTCGACGTATTTGCTGACCAGCTAAATGACGCTTCAGGATCCGGTTTATAAGc > 1:900407/1‑150 (MQ=255) | AAGATGGAAAAAACGGCGGAAAAAGGCGGTCGCCCGGCGTCCAACGGTAAGCGTTTTACCTCGCCGGGGCGTAAAAAGAAGGGGCGCTGATTAACGCCTCAGACTGATGAAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTCGGGAAAAGGGTTAGGGTGAGGGGAAAATTGTGTTCACACTGACGAGTGAAAATCTCAGGCGTTGATTGTGGATTAGCGCCTGCCGCGCGTCGACGTATTTGCTGACCAGCTAAATGACGCTTCAGGATCCGGTTTATAAGCCTGCT > CP009273/4221065‑4221360 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |