| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,225,841 | A→C | 100% | K3T (AAA→ACA) | yjbE → | extracellular polysaccharide production threonine‑rich protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,225,841 | 0 | A | C | 99.6% | 839.4 / ‑5.3 | 216 | K3T (AAA→ACA) | yjbE | extracellular polysaccharide production threonine‑rich protein |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base C (135/80); total (136/80) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.92e-01 | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 220 total aligned reads displayed.
TGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAAAAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGGCAGCAACGTCGGTTTCGGCGGGGAGTTCCTCCGCGACCAGCGTCAGCACCGTAAGCT > CP009273/4225697‑4225987 | tGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCTCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTc < 1:2108852/150‑1 (MQ=255) gATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCTCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCt < 1:1867641/150‑1 (MQ=255) ttcattcCAATTATCCTAAAACGCCATCGCTAATTCCCCTCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTAt < 2:1199762/150‑1 (MQ=255) tcattcCAATTATCCTAAAACGCCATCGCTAATTCCCCTCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATg > 2:826514/1‑150 (MQ=255) tcattcCAATTATCCTAAAACGCCATCGCTAATTCCCCTCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATg > 2:2060588/1‑150 (MQ=255) tcCAATTATCCTAAAACGCCATCGCTAATTCCCCTCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCAt > 1:1852467/1‑150 (MQ=255) ccAATTATCCTAAAACGCCATCGCTAATTCCCCTCGCCGTAATTCGCATGCTTTAGTTGTGTATACTAGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTAATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCAtt > 2:2216183/1‑150 (MQ=255) cAATTATCCTAAAACGCCATCGCTAATTCCCCTCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCAttt < 1:3642002/150‑1 (MQ=255) cAATTATCCTAAAACGCCATCGCTAATTCCCCTCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCAttt > 1:4498680/1‑150 (MQ=255) aTTATCCTAAAACGCCATCGCTAATTCCCCTCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCAttttt < 2:5026096/150‑1 (MQ=255) aTTATCCTAAAACGCCATCGCTAATTCCCCTCGCCGCAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCAttttt > 1:2168257/1‑150 (MQ=255) tATCCTAAAACGCCATCGCTAATTCCCCTCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGc > 2:352298/1‑150 (MQ=255) aTCCTAAAACGCCATCGCTAATTCCCCTCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGcc < 1:176379/150‑1 (MQ=255) ccTAAAACGCCATCGCTAATTCCCCTCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCat > 1:1955640/1‑150 (MQ=255) cTAAAACGCCATCGCTAATTCCCCTCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCata < 1:4108423/150‑1 (MQ=255) tAAAACGCCATCGCTAATTCCCCTCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCatat > 1:57864/1‑150 (MQ=255) taaaCGCCATCGCTAATTCCCCTCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATc > 1:1474682/2‑150 (MQ=255) aaaaCGCCATCGCTAATTCCCCTCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATc > 1:103110/1‑150 (MQ=255) aaaaCGCCATCGCTAATTCCCCTCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATc > 2:4417210/1‑150 (MQ=255) aaaaCGCCATCGCTAATTCCCCTCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATc < 1:2476635/150‑1 (MQ=255) aaCGCCATCGCTAATTCCCCTCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTg > 1:1175912/1‑150 (MQ=255) aCGCCAGAGCTAAGTCCCCTCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGATATTGTTATGAAAACAGTTCTGTATGGCATATTTGCCATATCTgc < 1:4347059/150‑1 (MQ=255) cGCCATCGCTAATTCCCCTCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTgcg > 2:3631937/1‑150 (MQ=255) gCCATCGCTAATTCCCCTCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTgcgc > 1:4063263/1‑150 (MQ=255) cGCTAATTCCCCTCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTgcg < 2:637518/150‑1 (MQ=255) cGCTAATTCCCCTCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTgcg > 2:2421886/1‑150 (MQ=255) gCTAATTCCCCTCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTgcgg > 1:969335/1‑150 (MQ=255) cTAATTCCCCTCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTgcggc < 1:229530/150‑1 (MQ=255) tAATTCCCCTCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTgcggcg < 1:928485/150‑1 (MQ=255) tAATTCCCCTCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTgcggcg > 2:4319246/1‑150 (MQ=255) tCCCCTCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACtt < 2:3050273/150‑1 (MQ=255) ccccTCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTc > 2:3972170/1‑150 (MQ=255) cctcgcCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTg > 1:4377903/4‑150 (MQ=255) ctcgcCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGc > 2:3414883/3‑150 (MQ=255) ctcgcCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGc > 2:1328334/3‑150 (MQ=255) tcgcCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCg < 1:1601165/149‑1 (MQ=255) gcCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGAATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTg > 2:1780870/1‑150 (MQ=255) cggaaTTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGACATATCTGCGCTTGCGGCGACTTCTGCGTggg > 1:1108150/4‑150 (MQ=255) ttCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCa < 1:4628067/150‑1 (MQ=255) tCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCAc > 1:3907586/1‑150 (MQ=255) tCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCAc > 2:3535883/1‑150 (MQ=255) cGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCAcc > 2:2942293/1‑150 (MQ=255) cGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCAcc > 2:4670000/1‑150 (MQ=255) gCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCt > 1:1015388/1‑150 (MQ=255) cATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTg > 1:172778/1‑150 (MQ=255) aTGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCAGTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGt < 2:3755196/150‑1 (MQ=255) tGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCTCCTGTa > 2:585920/1‑150 (MQ=255) gTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTgg > 1:3279290/1‑150 (MQ=255) ttGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTggg > 2:100462/1‑150 (MQ=255) gtgtATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCg > 1:4443203/1‑150 (MQ=255) gtATCCTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGaa < 2:4327020/150‑1 (MQ=255) gtATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGaa > 1:1729551/1‑150 (MQ=255) tataCTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAg < 2:4416494/150‑1 (MQ=255) ataCTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGc > 1:782682/1‑150 (MQ=255) taCTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCg < 1:849461/150‑1 (MQ=255) taCTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCg > 2:488381/1‑150 (MQ=255) cGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAg < 2:2190527/150‑1 (MQ=255) cGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAg < 1:2079694/150‑1 (MQ=255) tCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGt > 2:3004828/1‑150 (MQ=255) ccgcccgAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCg < 2:744665/150‑1 (MQ=255) ccgcccgAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCg > 2:3214782/1‑150 (MQ=255) ccgcccgAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCg > 2:2651320/1‑150 (MQ=255) gcccgAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGgc < 2:2341115/150‑1 (MQ=255) cccgAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGgca < 1:431768/150‑1 (MQ=255) cccgAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGgca < 2:4216400/150‑1 (MQ=255) cgATATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGgcagc < 1:3947151/150‑1 (MQ=255) cgAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGgcagc > 1:3259135/1‑150 (MQ=255) cgAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGgcagc > 1:3258910/1‑150 (MQ=255) cgAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGgcagc > 1:2822249/1‑150 (MQ=255) cgAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGgcagc > 1:4694117/1‑150 (MQ=255) cgAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGgcagc > 1:964115/1‑150 (MQ=255) gAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGgcagca > 2:3471666/1‑150 (MQ=255) aTGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGGCAGCAACg > 1:40729/1‑150 (MQ=255) tGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGTCGACTTCTGCGTGTGCTGCACCTGTACAGTTGGGCGAAGCGGCAGGGTCCGCAGCAActt > 2:4834261/1‑148 (MQ=255) gTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGGCAGCAACGTc > 1:3133989/1‑150 (MQ=255) tttttGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGGCAGCAACGTCg < 2:4442594/150‑1 (MQ=255) tGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGGCAGCAACGTCGGttt < 1:4821493/150‑1 (MQ=255) gggTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGGCAGCAACGTCGGTTTc < 1:530276/150‑1 (MQ=255) ggTAAATTTCCATTCATTCAATGAAGGGACATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGGCAGCAACGTCGGTTTcg < 2:2774432/150‑1 (MQ=255) ggTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGATTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGGCAGCAACGTCGGTTTcg > 1:5006757/1‑150 (MQ=255) tAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGGCAGCAACGTCGGTTTcggc < 1:5099079/150‑1 (MQ=255) cattcaATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGGCAGCAACGTCGGTTTCGGCGGGGAGTtcctc > 1:1979596/1‑150 (MQ=255) attcaATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGGCAGCAACGTCGGTTTCGGCGGGGAGTtcctcc < 1:1648767/150‑1 (MQ=255) ttcaATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGGCAGCAACGTCGGTTTCGGCGGGGAGTTCCTCcg > 1:2326766/1‑150 (MQ=255) ttcaATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGGCAGCAACGTCGGTTTCGGCGGGGAGTTCCTCcg > 2:5072430/1‑150 (MQ=255) ttcaATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGGCAGCAACGTCGGTTTCGGCGGGGAGTTCCTCcg > 1:3501264/1‑150 (MQ=255) tcaATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGGCAGCAACGTCGGTTTCGGCGGGGAGTTCCTCcgc < 1:4973180/150‑1 (MQ=255) aaTGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGGCAGCAACGTCGGTTTCGGCGGGGAGTTCCTCCGCGa < 1:2807576/150‑1 (MQ=255) aTGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGGCAGCAACGTCGGTTTCGGCGGGGAGTTCCTCCGCGAc > 1:4330036/1‑150 (MQ=255) aTGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGGCAGCAACGTCGGTTTCGGCGGGGAGTTCCTCCGCGAc > 1:4860577/1‑150 (MQ=255) aTGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGGCAGCAACGTCGGTTTCGGCGGGGAGTTCCTCCGCGAc < 1:1494028/150‑1 (MQ=255) aaGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGGCAGCAACGTCGGTTTCGGCGGGGAGTTCCTCCGCGACCAg > 2:4179150/1‑150 (MQ=255) aGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGGCAGCAACGTCGGTTTCGGCGGGGAGTTCCTCCGCGACCAGc < 1:2573419/150‑1 (MQ=255) ggAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGGCAGCAACGTCGGTTTCGGCGGGGAGTTCCTCCGCGACCAGCGt < 2:3088222/150‑1 (MQ=255) aaaTTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGGCAGCAACGTCGGTTTCGGCGGGGAGTTCCTCCGCGACCAGCGTCa > 2:1669560/1‑150 (MQ=255) aTTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGGCAGCAACGTCGGTTTCGGCGGGGAGTTCCTCCGCGACCAGCGTCAGc > 1:2231292/1‑150 (MQ=255) tGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGGCAGCAACGTCGGTTTCGGCGGGGAGTTCCTCCGCGACCAGCGTCAGCAc > 2:582490/1‑150 (MQ=255) tATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGGCAGCAACGTCGGTTTCGGCGGGGAGTTCCTCCGCGACCAGCGTCAGCACCGt > 1:1909381/1‑150 (MQ=255) aTGAAAACAGTTCTGTATGGCATTTTTGCCATATCTNCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACCGGTGGGCGAAGCGGCAGGGTCGGCCGCAACGTCGGTTGCGGCGGGGAGTTCCGCCGCGACCCGCGTCAGCGCCggg > 1:2676559/1‑148 (MQ=255) aaacaGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGGCAGCAACGTCGGTTTCGGCGGGGAGTTCCTCCGCGACCAGCGTCAGCACCGTAAGCt < 1:4545616/150‑1 (MQ=255) | TGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAAAAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGGCAGCAACGTCGGTTTCGGCGGGGAGTTCCTCCGCGACCAGCGTCAGCACCGTAAGCT > CP009273/4225697‑4225987 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |