| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,244,663 | G→T | 78.4% | H578N (CAC→AAC) | plsB ← | glycerol‑3‑phosphate O‑acyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,244,663 | 0 | G | T | 78.4% | 523.9 / 195.1 | 306 | H578N (CAC→AAC) | plsB | glycerol‑3‑phosphate O‑acyltransferase |
| Reads supporting (aligned to +/- strand): ref base G (34/32); new base T (110/130); total (144/162) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.87e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.13e-01 | |||||||||||
Only 100 of 310 total aligned reads displayed.
GACGATTGCCGCCATCAGCGAAGGCAGCACCAACATATGCGCAATGTTGTTGCGATAGTAGGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTGATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCAGTTGAGTTGCTCGGTTAACTGCTCGCGGGTGAGTGAGCGCTGACGTGATGCCAGTAGCGCAGTA > CP009273/4244514‑4244808 | gACGATTGCCGCCATCAGCGAAGGCAGCACCAACATATGCGCAATGTTGTTGCGATAGTAGGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTg > 2:1686500/1‑150 (MQ=255) cGATTGCCGCCATCAGCGAAGGCAGCACCAACATATGCGCAATGTTGTTGCGATAGTAGGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTAt < 2:4473541/150‑1 (MQ=255) aTTGCCGCCATCAGCGAAGGCAGCACCAACATATGCGCAATGTTGTTGCGATAGTAGGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCATACTTGTTCATTTGCAGCGCGTTATca < 1:999322/150‑2 (MQ=255) ttGCCGCCATCAGCGAAGGCAGCACCAACATATGCGCAATGTTGTTGCGATAGTAGGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTGATCGa > 2:372639/1‑150 (MQ=255) gccgccATCAGCGAAGGCAGCACCAACATATGCGCAATGTTGTTGCGATAGTAGGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTGATCGATa > 1:2523258/1‑150 (MQ=255) gccATCAGCGAAGGCAGCACCAACATATGCGCAATGTTGTTGCGATAGTAGGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGc > 2:1403833/1‑150 (MQ=255) aTCAGCGAAGGCAGCACCAACATATGCGCAATGTTGTTGCGATAGTAGGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTcg < 2:2727092/150‑1 (MQ=255) aTCAGCGAAGGCAGCACCAACATATGCGCAATGTTGTTGCGATAGTAGGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTcg < 2:1971988/150‑1 (MQ=255) cGAAGGCAGCACCAACATATGCGCAATGTTGTTGCGATAGTAGGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTcgctggc > 2:1461734/1‑150 (MQ=255) gAAGGCAGCACCAACATATGCGCAATGTTGTTGCGATAGTAGGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTcgctggcg > 2:3524449/1‑150 (MQ=255) gAAGGCAGCACCAACATATGCGCAATGTTGTTGCGATAGTAGGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTGATCGATAAGCTcgctggcg > 1:484503/1‑150 (MQ=255) cagcaCCAACATATGCGCAATGTTGTTGCGATAGTAGGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCgctggcgctggc > 2:1832338/1‑150 (MQ=255) cagcaCCAACATATGCGCAATGTTGTTGCGATAGTAGGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCgctggcgctggc > 2:1149043/1‑150 (MQ=255) agcaCCAACATATGCGCAATGTTGTTGCGATAGTAGGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCgctggct < 2:3299651/150‑1 (MQ=255) aCCAACATATGCGCAATGTTGTTGCGATAGTAGGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGaa > 2:2623013/1‑150 (MQ=255) ccAACATATGCGCAATGTTGTTGCGATAGTAGGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTGATCGATAAGCTCGCTGGCGCTGGCTGAAg < 2:3997900/150‑1 (MQ=255) aaCATATGCGCAATGTTGTTGCGATAGTAGGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGa < 2:1037067/150‑1 (MQ=255) aaCATATGCGCAATGTTGTTGCGATAGTAGGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTGATCGATAAGCTCGCTGGCGCTGGCTGAAGGa > 1:4227370/1‑150 (MQ=255) atatGCGCAATGTTGTTGCGATAGTAGGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACg < 1:3346467/150‑1 (MQ=255) atatGCGCAATGTTGTTGCGATAGTAGGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTGATCGATAAGCTCGCTGGCGCTGGCTGAAGGACCg > 2:3607872/1‑150 (MQ=255) atGCGCAATGTTGTTGCGATAGTAGGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTGATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGt < 1:3138034/150‑1 (MQ=255) cgcAATGTTGTTGCGATAGTAGGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTaga < 1:3671887/150‑1 (MQ=255) gcAATGTTGTTGCGATAGTAGGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTAGCAGCGCGTGATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTagag > 1:2102681/1‑150 (MQ=255) cAATGTTGTTGCGATAGTAGGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGt < 1:1009363/150‑1 (MQ=255) aaTGTTGTTGCGATAGTAGGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTc < 2:4860917/150‑1 (MQ=255) aTGTTGTTGCGATAGTAGGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTGATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTcc < 2:1730855/150‑1 (MQ=255) ttgttgCGATAGTAGGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTg < 1:2870023/150‑1 (MQ=255) ttgttgCGATAGTAGGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTg < 1:2765655/150‑1 (MQ=255) ttgttgCGATAGTAGGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTg < 2:3032284/150‑1 (MQ=255) tgttgCGATAGTAGGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTGATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTgg > 2:4305477/1‑150 (MQ=255) tgttgCGATAGTAGGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTGATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTgg < 1:4366989/150‑1 (MQ=255) tgCGATAGTAGGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGt < 2:2225237/150‑1 (MQ=255) gCGATAGTAGGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTGATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTa < 1:2274438/150‑1 (MQ=255) gATAGTAGGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAgg < 2:1077982/150‑1 (MQ=255) gtagGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCAc > 2:540263/1‑150 (MQ=255) gtagGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCAc > 1:5072333/1‑150 (MQ=255) agGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCTAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGt < 1:2358933/150‑1 (MQ=255) atcaGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTgcgc > 1:2231117/1‑150 (MQ=255) caGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCAt > 1:1709792/1‑150 (MQ=255) aGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATc > 1:172601/1‑150 (MQ=255) gCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCa > 1:3785655/1‑150 (MQ=255) cACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTGATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAg < 2:2504541/150‑1 (MQ=255) cACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTGATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAg < 2:3250134/150‑1 (MQ=255) ccGCTTGTTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTGATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGAt < 2:3801358/150‑1 (MQ=255) ccGCTTGTTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTGATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGAt < 2:1624131/150‑1 (MQ=255) ccGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGAt < 1:4113742/150‑1 (MQ=255) cGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATc < 1:3549521/150‑1 (MQ=255) cGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATc < 2:4530381/150‑1 (MQ=255) cGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATc < 1:1793111/150‑1 (MQ=255) cGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTGATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATc < 2:2574292/150‑1 (MQ=255) cTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCa < 1:2043955/150‑1 (MQ=255) cTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCa < 1:1521776/150‑1 (MQ=255) ttGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAg < 2:1302382/150‑1 (MQ=255) cTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTa < 2:1668087/150‑1 (MQ=255) cTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTa < 2:4034838/150‑1 (MQ=255) cgcgcgGCGGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATATGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGc > 2:4973888/1‑150 (MQ=255) cgGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCagtt < 2:4762564/150‑1 (MQ=255) cgGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTGATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGGAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCagtt > 2:2835878/1‑150 (MQ=255) ggCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCagttg > 2:4931808/1‑150 (MQ=255) ggCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCagttg > 2:1775627/1‑150 (MQ=255) ggCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCagttg > 2:407705/1‑150 (MQ=255) ggCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTGATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCagttg < 1:4632391/150‑1 (MQ=255) gCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCagttga < 2:605701/150‑1 (MQ=255) gCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCagttga > 2:682320/1‑150 (MQ=255) aaTGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCagttgagttg > 2:4561368/1‑150 (MQ=255) aaTGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCagttgagttg < 1:4482734/150‑1 (MQ=255) atgatgTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCAGTTGAGTTGCTCg < 1:1186911/150‑1 (MQ=255) atgatgTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCAGTTGAGTTGCTCg < 2:1336437/150‑1 (MQ=255) atgTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCAGTTGAGTTGCTCGGtt < 1:3227490/150‑1 (MQ=255) tgTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCAGTTGAGTTGCTCGGTTa < 1:1461734/150‑1 (MQ=255) tgTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCAGTTGAGTTGCTCGGTTa > 1:710394/1‑150 (MQ=255) tgTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTGATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCAGTTGAGTTGCTCGGTTa > 1:431877/1‑150 (MQ=255) cGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCAGTTGAGTTGCTCGGTTAACt > 2:2402132/1‑150 (MQ=255) ccGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCAGTTGAGTTGCTCGGTTAACTGc < 1:2912403/150‑1 (MQ=255) ccGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTGATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCAGTTGAGTTGCTCGGTTAACTGc > 1:3378745/1‑150 (MQ=255) gATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCAGTTGAGTTGCTCGGTTAACTGCTc > 2:4263324/1‑150 (MQ=255) gATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCAGTTGAGTTGCTCGGTTAACTGCTc > 1:4690551/1‑150 (MQ=255) aTTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGTCACGTTGCGCATCAGATCCAGGTAGCAGTTGAGTTGCTCGGTTAACTGCTcg < 2:4672358/150‑1 (MQ=255) ttGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCAGTTGAGTTGCTCGGTTAACTGCTcgc < 1:4483378/150‑1 (MQ=255) gtCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTGATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCAGTTGAGTTGCTCGGTTAACTGCTCGCGGgt > 2:4594848/1‑150 (MQ=255) ttCTCGACTTCAAACTTGTTCATTTGCAGCGCGTGATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCAGTTGAGTTGCTCGGTTAACTGCTCGCGGgtgagt < 1:372639/150‑1 (MQ=255) tctcGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCAGTTGAGTTGCTCGGTTAACTGCTCGCGGgtgagtg > 2:3545993/1‑150 (MQ=255) tctcGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCAGTTGAGTTGCTCGGTTAACTGCTCGCGGgtgagtg < 2:2139719/150‑1 (MQ=255) tcGACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCAGTTGAGTTGCTCGGTTAACTGCTCGCGGGtgagtgag > 1:4529548/1‑150 (MQ=255) tcGACTTCAAACTTGTTCATTTGCAGCGCGTGATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCAGTTGAGTTGCTCGGTTAACTGCTCGCGGGtgagtgag < 2:4539957/150‑1 (MQ=255) gACTTCAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCAGTTGAGTTGCTCGGTTAACTGCTCGCGGGTGAGTGAgcg > 1:3917473/1‑150 (MQ=255) gACTTCAAACTTGTTCATTTGCAGCGCGATATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCAGTTGAGTTGCTCGGTTAACTGCTCGCGGGTGAGTGAgcg > 1:2166110/1‑150 (MQ=255) cAAACTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCAGTTGAGTTGCTCGGTTAACTGCTCGCGGGTGAGTGAGCGCTGAc < 2:1099705/150‑1 (MQ=255) aCTTGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCAGTTGAGTTGCTCGGTTAACTGCTCGCGGGTGAGTGAGCGCTGACGTg < 2:2705892/150‑1 (MQ=255) tGTTCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCAGTTGAGTTGCTCGGTTAACTGCTCGCGGGTGAGTGAGCGCTGACGTGATg > 2:291768/1‑150 (MQ=255) ttCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCAGTTGAGTTGCTCGGTTAACTGCTCGCGGGTGAGTGAGCGCTGACGTGATGcc < 2:3785655/150‑1 (MQ=255) tCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCAGTTGAGTTGCTCGGTTAACTGCTCGCGGGTGAGTGAGCGCTGACGTGATGCCa < 1:4662411/150‑1 (MQ=255) tCATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCAGTTGAGTTGCTCGGTTAACTGCTCGCGGGTGAGTGAGCGCTGACGTGATGCCa < 1:4889420/150‑1 (MQ=255) tCATTTGCAGCGCGTGATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCAGTTGAGTTGCTCGGTTAACTGCTCGCGGGTGAGTGAGCGCTGACGTGATGCCa < 2:3365835/150‑1 (MQ=255) cATTTGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCAGTTGAGTTGCTCGGTTAACTGCTCGCGGGTGAGTGAGCGCTGACGTGATGCCAg < 2:2270261/150‑1 (MQ=255) aTTTGCAGCGCGTGATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCAGTTGAGTTGCTCGGTTAACTGCTCGCGGGTGAGTGAGCGCTGACGTGATGCCAGt > 1:362073/1‑150 (MQ=255) tttGCAGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCAGTTGAGTTGCTCGGTTAACTGCTCGCGGGTGAGTGAGCGCTGACGTGATGCCAGTa < 1:1379081/150‑1 (MQ=255) aGCGCGTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCAGTTGAGTTGCTCGGTTAACTGCTCGCGGGTGAGTGAGCGCTGACGTGATGCCAGTAGCGCa > 1:842726/1‑150 (MQ=255) aGCGCGTGATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTCGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCAGTTGAGTTGCTCGGTTAACTGCTCGCGGGTGAGTGAGCGCTGACGTGATGCCAGTAGCGCa > 2:5107724/1‑150 (MQ=255) gcgTTATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCAGTTGAGTTGCTCGGTTAACTGCTCGCGGGTGAGTGAGCGCTGACGTGATGCCAGTAGCGCAGTa < 2:873899/150‑1 (MQ=255) | GACGATTGCCGCCATCAGCGAAGGCAGCACCAACATATGCGCAATGTTGTTGCGATAGTAGGTCATCAGCACCGCTTGCTCGCGCGGCAGAATGATGATGTCGCCGATTGTGTCTTTCTCGACTTCAAACTTGTTCATTTGCAGCGCGTGATCGATAAGCTCGCTGGCGCTGGCTGAAGGAACGGTAGAGTCCGTGGAGTAGGGCACGTTGCGCATCAGATCCAGGTAGCAGTTGAGTTGCTCGGTTAACTGCTCGCGGGTGAGTGAGCGCTGACGTGATGCCAGTAGCGCAGTA > CP009273/4244514‑4244808 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |