Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 4,427,647 G→A 100% D42N (GAT→AAT)  ytfI → uncharacterized protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092734,427,6470GA98.0% 636.2 / 2.0 196D42N (GAT→AAT) ytfIuncharacterized protein
Reads supporting (aligned to +/- strand):  ref base G (2/2);  new base A (94/98);  total (96/100)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.02e-01
Rejected as polymorphism: Frequency below/above cutoff threshold.
Rejected as polymorphism: Polymorphic base substitution creates a homopolymer stretch.

Only 100 of 201 total aligned reads displayed.

AACCAAATAAAATAAGGTTGTCATATGTTACCCAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAGATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGAAACTGTTCACGCCATGGATAAGTTTCTTATCAGTTTCAGCCTT  >  CP009273/4427500‑4427793
                                                                                                                                                    |                                                                                                                                                  
 aCCAAATAAAATAAGGTTGTCATATGTTACCCAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAAtt                                                                                                                                                 >  1:1577059/1‑150 (MQ=255)
     aataaaataaTGTTGTCATATGTTACCCAGGATCAGACAAAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAATTGGAt                                                                                                                                             <  2:4011575/150‑1 (MQ=255)
      ataaaataaGGTTGTCATATGTTACCCAGGATCAGACACAATAATTTTATAGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAATTGGAtt                                                                                                                                            <  2:5012285/150‑1 (MQ=255)
        aaaataaGGTTGTCATATGTTACCCAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTc                                                                                                                                          >  2:4557670/1‑150 (MQ=255)
         aaataaGGTTGTCATATGTTACCCAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCg                                                                                                                                         <  1:763574/150‑1 (MQ=255)
         aaataaGGTTGTCATATGTTACCCAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCg                                                                                                                                         <  2:1904669/150‑1 (MQ=255)
         aaataaGGTTGTCATATGTTACCCAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCg                                                                                                                                         <  2:3631332/150‑1 (MQ=255)
         aaataaGGTTGTCATATGTTACCCAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCg                                                                                                                                         <  1:1939287/150‑1 (MQ=255)
            taaGGTTGTCATATGTTACCCAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCGAAt                                                                                                                                      >  2:1059833/1‑150 (MQ=255)
              aGGTTGTCATATGTTACCCAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCGAATTa                                                                                                                                    >  2:858474/1‑150 (MQ=255)
              aGGTTGTCATATGTTACCCAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCGAATTa                                                                                                                                    <  1:5079829/150‑1 (MQ=255)
                 ttGTCATATGTTACCCAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCGAATTATGa                                                                                                                                 >  2:2962662/1‑150 (MQ=255)
                  tGTCATATGTTACCCAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCGAATTATGAt                                                                                                                                >  2:3278839/1‑150 (MQ=255)
                  tGTCATATGTTACCCAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCGAATTATGAt                                                                                                                                >  1:2389534/1‑150 (MQ=255)
                   gTCATATGTTACCCAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCGAATTATGATa                                                                                                                               <  1:1120134/150‑1 (MQ=255)
                    tCATATGTTACCCAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAGATTGGATTTCGAATTATGATAg                                                                                                                              >  2:736603/1‑150 (MQ=255)
                       tatGTTACCCAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCGAATTATGATAGCCt                                                                                                                           >  2:3709891/1‑150 (MQ=255)
                         tGTTACCCAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCGAATTATGATAGCCTGt                                                                                                                         <  1:90156/150‑1 (MQ=255)
                            tACCCAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCGAATTATGATAGCCTGTTaa                                                                                                                      <  1:4566421/150‑1 (MQ=255)
                            tACCCAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCGAATTATGATAGCCTGTTaa                                                                                                                      >  1:2437443/1‑150 (MQ=255)
                             aCCCAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCGAATTATGATAGCCTGTTAAc                                                                                                                     >  2:4706661/1‑150 (MQ=255)
                               ccAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCGAATTATGATAGCCTGTTAACtt                                                                                                                   >  1:3489666/1‑150 (MQ=255)
                               ccAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCGAATTATGATAGCCTGTTAACtt                                                                                                                   >  1:3693035/1‑150 (MQ=255)
                                cAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAGATTGGATTTCGAATTATGATAGCCTGTTAACttt                                                                                                                  <  1:2882889/150‑1 (MQ=255)
                                cAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCGAATTATGATAGCCTGTTAACttt                                                                                                                  >  2:2226718/1‑150 (MQ=255)
                                cAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCGAATTATGATAGCCTGTTAACttt                                                                                                                  <  2:1449761/150‑1 (MQ=255)
                                 aGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCGAATTATGATAGCCTGTTAACTTTg                                                                                                                 >  2:4357158/1‑150 (MQ=255)
                                   gATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAg                                                                                                               >  1:1682507/1‑150 (MQ=255)
                                    aTCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAgg                                                                                                              >  2:4644749/1‑150 (MQ=255)
                                    aTCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAgg                                                                                                              >  2:2757976/1‑150 (MQ=255)
                                    aTCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAgg                                                                                                              >  2:4431179/1‑150 (MQ=255)
                                       aGACAAATTAATTTTATTGGTGCGGTGTTTTTATTTTTAAATTCTTCGTTTAAAAAAAAACATTCAAACAATTTTTTTAACAACATCCATCATGATTTAACGAAAAAAAATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAg                                                                                                           <  2:223177/150‑1 (MQ=255)
                                             aataatTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCttt                                                                                                     <  1:4460956/150‑1 (MQ=255)
                                               taatTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCg                                                                                                   <  2:1734695/150‑1 (MQ=255)
                                               taatTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCg                                                                                                   >  2:910938/1‑150 (MQ=255)
                                                  ttttATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTg                                                                                                <  2:3295573/150‑1 (MQ=255)
                                                  ttttATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTg                                                                                                >  2:3055688/1‑150 (MQ=255)
                                                   tttATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTgc                                                                                               <  1:694738/150‑1 (MQ=255)
                                                   tttATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAAGTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTgc                                                                                               >  2:3342659/1‑150 (MQ=255)
                                                     tATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTgcgc                                                                                             >  1:4377432/1‑150 (MQ=255)
                                                      aTTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCa                                                                                            <  1:227650/150‑1 (MQ=255)
                                                       ttGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCaa                                                                                           <  1:3320484/150‑1 (MQ=255)
                                                        tGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAGATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAAc                                                                                          >  1:954828/1‑150 (MQ=255)
                                                         ggTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACt                                                                                         <  1:3062177/150‑1 (MQ=255)
                                                         ggTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACt                                                                                         >  1:4212251/1‑150 (MQ=255)
                                                          gTGCTGTGGAGTTATTTGTAAAGTATTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGTGAGTTCTTTCGTTGCGCAACTc                                                                                        <  1:1359241/150‑1 (MQ=255)
                                                           tGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCa                                                                                       <  2:1404665/150‑1 (MQ=255)
                                                           tGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCa                                                                                       <  2:1404654/150‑1 (MQ=255)
                                                            gCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAg                                                                                      >  2:1453220/1‑150 (MQ=255)
                                                            gCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAg                                                                                      >  1:621400/1‑150 (MQ=255)
                                                              ggTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGAt                                                                                    >  2:1550043/1‑150 (MQ=255)
                                                              ggTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGAt                                                                                    >  1:5063153/1‑150 (MQ=255)
                                                               gTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGAtt                                                                                   <  2:1057530/150‑1 (MQ=255)
                                                               gTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGAtt                                                                                   >  1:4335842/1‑150 (MQ=255)
                                                                tGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGATTg                                                                                  <  2:3698638/150‑1 (MQ=255)
                                                                tGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGATTg                                                                                  >  1:879695/1‑150 (MQ=255)
                                                                tGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGATTg                                                                                  >  1:47487/1‑150 (MQ=255)
                                                                tGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGATTg                                                                                  >  2:707050/1‑150 (MQ=255)
                                                                    gTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGATTGATaa                                                                              >  2:2680838/1‑150 (MQ=255)
                                                                     ttATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGATTGATaaa                                                                             >  1:3277672/1‑150 (MQ=255)
                                                                     ttATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGATTGATaaa                                                                             >  1:104054/1‑150 (MQ=255)
                                                                     ttATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTAGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGATTGATaaa                                                                             >  2:5036979/1‑150 (MQ=255)
                                                                     ttATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCAGGCATTTAAGAAAAAAAATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGATTGATaaa                                                                             >  1:4372200/1‑150 (MQ=255)
                                                                        tttGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGATTGATAAAAGt                                                                          <  2:2133566/150‑1 (MQ=255)
                                                                          tGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGATTGATAAAAGTgg                                                                        >  1:4124143/1‑150 (MQ=255)
                                                                                gTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCa                                                                  <  1:4631546/150‑1 (MQ=255)
                                                                                 tCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAg                                                                 <  2:2064877/150‑1 (MQ=255)
                                                                                 tCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAg                                                                 <  2:3255374/150‑1 (MQ=255)
                                                                                     cGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGc                                                             >  1:2107150/1‑150 (MQ=255)
                                                                                       tataCAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCGAATTATGAAAGCCTGTTAACATTGAGGGAGTTCTTTCGTTTCTCAACTCAGATTGATAAAAGTGGTTATCAGGTGCtt                                                           >  1:2682836/1‑150 (MQ=255)
                                                                                           cAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTtcat                                                       <  1:1413822/150‑1 (MQ=255)
                                                                                             aaaaCACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTtcatca                                                     >  1:55728/1‑150 (MQ=255)
                                                                                                  acaTTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCaaaaaa                                                >  2:4185624/1‑150 (MQ=255)
                                                                                                  acaTTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCaaaaaa                                                >  2:4929007/1‑150 (MQ=255)
                                                                                                   caTTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAAt                                               <  1:1289521/150‑1 (MQ=255)
                                                                                                    aTTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATg                                              <  2:3833645/150‑1 (MQ=255)
                                                                                                         aaCAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGAAACt                                         <  2:3170740/150‑1 (MQ=255)
                                                                                                          aCAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGAAACTg                                        >  1:4771425/1‑150 (MQ=255)
                                                                                                           cAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGAAACTGt                                       >  2:560789/1‑150 (MQ=255)
                                                                                                            aaTTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCATAAAATGAAACTGtt                                      >  2:3463926/1‑150 (MQ=255)
                                                                                                             aTTTTTTTAACAACATCCATCATTCATTTAAGAAAAAAAATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGAAACTGTTc                                     <  1:1001867/150‑1 (MQ=255)
                                                                                                             aTTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGAAACTGTTc                                     <  2:3416096/150‑1 (MQ=255)
                                                                                                              tttttttAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGAAACTGTTCa                                    <  1:1729155/150‑1 (MQ=255)
                                                                                                                tttttAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGAAACTGTTCACg                                  <  2:4881893/150‑1 (MQ=255)
                                                                                                                   ttAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGAAACTGTTCACGCCa                               <  2:3665195/150‑1 (MQ=255)
                                                                                                                   ttAACAACATCCATCATGCATTTAAGAAAAAAAAATGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGAAACTGTTCACGCCa                               <  1:2310654/150‑1 (MQ=255)
                                                                                                                    tAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGAAACTGTTCACGCCAt                              >  2:1576336/1‑150 (MQ=255)
                                                                                                                    tAACAACATCCATCATGCATTTAAGAAAAAAAATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGAAACTGTTCACGCCAt                              <  1:4557670/150‑1 (MQ=255)
                                                                                                                      acaacaTCCATCATGCATTTAAGAAAAAAAATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGAAACTGTTCACGCCATgg                            >  1:3004640/1‑150 (MQ=255)
                                                                                                                         acaTCCATCATGCATTTAAGAAAAAAAATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGAAACTGTTCACGCCATGGATa                         <  2:828668/150‑1 (MQ=255)
                                                                                                                              catcatGCATTTAAGAAAAAAAATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGAAACTGTTCACGCCATGGATAAGttt                    <  1:816902/150‑1 (MQ=255)
                                                                                                                                tcatGCATTTAAGAAAAAAAATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGAAACTGTTCACGCCATGGATAAGTTTca                  <  1:4357158/150‑2 (MQ=255)
                                                                                                                                 catGCATTTAAGAAAAAAAATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGAAACTGTTCACGCCATGGATAAGTTTCtt                 <  2:2482076/150‑1 (MQ=255)
                                                                                                                                  atGCATTTAAGAAAAAAAATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGAAACTGTTCACGCCATGGATAAGTTTCTTa                <  1:2428228/150‑1 (MQ=255)
                                                                                                                                    gCATTTAAGAAAAAAAATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGAAACTGTTCACGCCATGGATAAGTTTCTTacc              <  1:3725524/150‑3 (MQ=255)
                                                                                                                                    gCATTTAAGAAAAAAAATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGAAACTGTTCACGCCATGGATAAGTTTCTTATc              <  1:2619165/150‑1 (MQ=255)
                                                                                                                                     cATTTAAGAAAAAAAATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGAAACTGTTCACGCCATGGATAAGTTTCTTATCa             >  1:1796898/1‑150 (MQ=255)
                                                                                                                                         tAAGAAAAAAAATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGAAACTGTTCACGCCATGGATAAGTTTCTTATCAGttt         <  1:1235633/150‑1 (MQ=255)
                                                                                                                                               aaaaaaATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGAAACTGTTCACGCCATGGATAAGTTTCTTATCAGTTTCAGcc    >  1:1851785/1‑150 (MQ=255)
                                                                                                                                                 aaaaATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGAAACTGTTCACGCCATGGATAAGTTTCTTATCAGTTTCAGCCtt  <  1:4654720/150‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                  
AACCAAATAAAATAAGGTTGTCATATGTTACCCAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAGATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGAAACTGTTCACGCCATGGATAAGTTTCTTATCAGTTTCAGCCTT  >  CP009273/4427500‑4427793

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: