| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,445,338 | T→G | 10.8% | K30T (AAA→ACA) | fbp ← | fructose‑1,6‑bisphosphatase I |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,445,338 | 0 | T | G | 10.8% | 706.5 / 78.5 | 277 | K30T (AAA→ACA) | fbp | fructose‑1,6‑bisphosphatase I |
| Reads supporting (aligned to +/- strand): ref base T (137/110); new base G (14/16); total (151/126) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.38e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.86e-01 | |||||||||||
Only 100 of 287 total aligned reads displayed.
GTGCTTTCAGTGCGGCTTTCAGTTTTTCATTAGCGAACAAGTCGAGTTTCTGCTGAACCTCGCCCTGCACGTTCTCAGCACCGCTGGCACCCAGGATATCAACCAGTCCTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGACCGCAACAATCTTAACAAATAATCTC > CP009273/4445189‑4445487 | gTGCTTTCAGTGCGGCTTTCAGTTTTTCATTAGCGAACAAGTCGAGTTTCTGCTGAACCTCGCCCTGCACGTTCTCAGCACCGCTGGCACCCAGGATATCAACCAGTCCTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGtt > 1:3628411/1‑150 (MQ=255) tGCTTTCAGTGCGGCTTTCAGTTTTTCATTAGCGAACAAGTCGAGTTTCTGCTGAACCTCGCCCTGCACGTTCTCAGCACCGCTGGCACCCAGGATATCAACCAGTCCTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGttt < 1:1642444/150‑1 (MQ=255) gCTTTCAGTGCGGCTTTCAGTTTTTCATTAGCGAACAAGTCGAGTTTCTGCTGAACCTCGCCCTGCACGTTCTCAGCACCGCTGGCACCCAGGATATCAACCAGTCCTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGtttt < 1:861645/150‑1 (MQ=255) gCTTTCAGTGCGGCTTTCAGTTTTTCATTAGCGAACAAGTCGAGTTTCTGCTGAACCTCGCCCTGCACGTTCTCAGCACCGCTGGCACCCAGGATATCAACCAGTCCTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGtttt < 2:2039219/150‑1 (MQ=255) cTTTCAGTGCGGCTTTCAGTTTTTCATTAGCGAACAAGTCGAGTTTCTGCTGAACCTCGCCCTGCACGTTCTCAGCACCGCTGGCACCCAGGATATCAACCAGTCCTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGTTTTa < 2:3646145/150‑1 (MQ=255) cAGTGCGGCTTTCAGTTTTTCATTAGCGAACAAGTCGAGTTTCTGCTGAACCTCGCCCTGCACGTTCTCAGCACCGCTGGCACCCAGGATATCAACCAGTCCTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGTGTTATTGc < 2:4566182/150‑1 (MQ=255) aGTGCGGCTTTCAGTTTTTCATTAGCGAACAAGTCGAGTTTCTGCTGAACCTCGCCCTGCACGTTCTCAGCACCGCTGGCACCCAGGATATCAACCAGTCCTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGTTTTATTGcc > 2:1176443/1‑150 (MQ=255) cGGCTTTCAGTTTTTCATTAGCGAACAAGTCGAGTTTCTGCTGAACCTCGCCCTGCACGTTCTCAGCACCGCTGGCACCCAGGATATCAACCAGTCCTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACa < 2:828613/150‑1 (MQ=255) ggCTTTCAGTTTTTCATTAGCGAACAAGTCGAGTTTCTGCTGAACCTCGCCCTGCACGTTCTCAGCACCGCTGGCACCCAGGATATCAACCAGTCCTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAg < 1:640326/150‑1 (MQ=255) gCTTTCAGTTTTTCATTAGCGAACAAGTCGAGTTTCTGCTGAACCTCGCCCTGCACGTTCTCAGCACCGCTGGCACCCAGGATATCAACCAGTCCTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGTGTTATTGCCGACAGc > 2:421835/1‑150 (MQ=255) ttCAGTTTTTCATTAGCGAACAAGTCGAGTTTCTGCTGAACCTCGCCCTGCACGTTCTCAGCACCGCTGGCACCCAGGATATCAACCAGTCCTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCaaa < 2:2977588/150‑1 (MQ=255) cAGTTTTTCATTAGCGAACACGTCGAGTTTCTGCTGAACCTCGCCCTGCACGTTCTCAGCACCGCTGGCACCCAGGATATCAACCAGTCCTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGc < 2:4839469/150‑1 (MQ=255) aGTTTTTCATTAGCGAACAAGTCGAGTTTCTGCTGAACCTCGCCCTGCACGTTCTCAGCACCGCTGGCACCCAGGATATCAACCAGTCCTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGTGTTATTGCCGACAGCAAAGCa > 2:4274832/1‑150 (MQ=255) ttttCATTAGCGAACAAGTCGAGTTTCTGCTGAACCTCGCCCTGCACGTTCTCAGCACCGCTGGCACCCAGGATATCAACCAGTCCTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTg < 2:2182580/150‑1 (MQ=255) tttCATTAGCGAACAAGTCGAGTTTCTGCTGAACCTCGCCCTGCACGTTCTCAGCACCGCTGGCACCCAGGATATCAACCAGTCCTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGa > 2:3905472/1‑150 (MQ=255) aTTAGCGAACAAGTCGAGTTTCTGCTGAACCTCGCCCTGCACGTTCTCAGCACCGCTGGCACCCAGGATATCAACCAGTCCTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTc > 1:3010071/1‑150 (MQ=255) aTTAGCGAACAAGTCGAGTTTCTGCTGAACCTCGCCCTGCACGTTCTCAGCACCGCTGGCACCCAGGATATCAACCAGTCCTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTc < 1:3245214/150‑1 (MQ=255) ttAGCGAACAAGTCGAGTTTCTGCTGAACCTCGCCCTGCACGTTCTCAGCACCGCTGGCACCCAGGATATCAACCAGTCCTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCa > 1:2903027/1‑150 (MQ=255) tAGCGAACAAGTCGAGTTTCTGCTGAACCTCGCCCTGCACGTTCTCAGCACCGCTGGCACCCAGGATATCAACCAGTCCTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCAc > 2:2177898/1‑150 (MQ=255) tAGCGAACAAGTCGAGTTTCTGCTGAACCTCGCCCTGCACGTTCTCAGCACCGCTGGCACCCAGGATATCAACCAGTCCTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCAc > 2:1869738/1‑150 (MQ=255) aGCGAACAAGTCGAGTTTCTGCTGAACCTCGCCCTGCACGTTCTCAGCACCGCTGGCACCCAGGATATCAACCAGTCCTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCAcc > 2:1099021/1‑150 (MQ=255) cGAACAAGTCGAGTTTCTGCTGAACCTCGCCCTGCACGTTCTCAGCACCGCTGGCACCCAGGATATCAACCAGTCCTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCgg < 2:3502812/150‑1 (MQ=255) gAACAAGTCGAGTTTCTGCTGAACCTCGCCCTGCACGTTCTCAGCACCGCTGGCACCCAGGATATCAACCAGTCCTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGt > 2:4161140/1‑150 (MQ=255) aaGTCGAGTTTCTGCTGAACCTCGCCCTGCACGTTCTCAGCACCGCTGGCACCCAGGATATCAACCAGTCCTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCa > 2:4505227/1‑150 (MQ=255) gTCGAGTTTCTGCTGAACCTCGCCCTGCACGTTCTCAGCACCGCTGGCACCCAGGATATCAACCAGTCCTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATg > 1:2794178/1‑150 (MQ=255) gTCGAGTTTCTGCTGAACCTCGCCCTGCACGTTCTCAGCACCGCTGGCACCCAGGATATCAACCAGTCCTGCTGTGTTGATATCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATg > 2:3251355/1‑150 (MQ=255) cGAGTTTCTGCTGAACCTCGCCCTGCACGTTCTCAGCACCGCTGGCACCCAGGATATCAACCAGTCCTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATgag < 1:1575101/150‑1 (MQ=255) cGAGTTTCTGCTGAACCTCGCCCTGCACGTTCTCAGCACCGCTGGCACCCAGGATATCAACCAGTCCTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATgag > 1:938061/1‑150 (MQ=255) cGAGTTTCTGCTGAACCTCGCCCTGCACGTTCTCAGCACCGCTGGCACCCAGGATATCAACCAGTCCTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATgag > 1:2533271/1‑150 (MQ=255) gAGTTTCTGCTGAACCTCGCCCTGCACGTTCTCAGCACCGCTGGCACCCAGGATATCAACCAGTCCTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATgaga < 1:3410908/150‑1 (MQ=255) gAGTTTCTGCTGAACCTCGCCCTGCACGTTCTCAGCACCGCTGGCACCCAGGATATCAACCAGTCCTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATgaga < 1:4169717/150‑1 (MQ=255) aGTTTCTGCTGAACCTCGCCCTGCACGTTCTCAGCACCGCTGGCACCCAGGATATCAACCAGTCCTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGaa > 2:320636/1‑150 (MQ=255) tttCTGCTGAACCTCGCCCTGCACGTTCTCAGCACCGCTGGCACCCAGGATATCAACCAGTCCTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGaaaa > 2:1716097/1‑150 (MQ=255) tttCTGCTGAACCTCGCCCTGCACGTTCTCAGCACCGCTGGCACCCAGGATATCAACCAGTCCTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGaaaa > 1:2932133/1‑150 (MQ=255) tgctgAACCTCGCCCTGCACGTTCTCAGCACCGCTGGCACCCAGGATATCAACCAGTCCTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCg > 2:2836675/1‑150 (MQ=255) tgAACCTCGCCCTGCACGTTCTCAGCACCGCTGGCACCCAGGATATCAACCAGTCCTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGtgc > 2:4200823/1‑150 (MQ=255) gAACCTCGCCCTGCACGTTCTCAGCACCGCTGGCACCCAGGATATCAACCAGTCCTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGtgct > 1:275710/1‑150 (MQ=255) tCGCCCTGCACGTTCTCAGCACCGCTGGCACCCAGGATATCAACCAGTCCTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCttt < 1:4229186/150‑1 (MQ=255) tCGCCCTGCACGTTCTCAGCACCGCTGGCACCCAGGATATCAACCAGTCCTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCttt < 2:406545/150‑1 (MQ=255) cGCCCTGCACGTTCTCAGCACCGCTGGCACCCAGGATATCAACCAGTCCTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCtttt > 2:4891925/1‑150 (MQ=255) cGCCCTGCACGTTCTCAGCACCGCTGGCACCCAGGATATCAACCAGTCCTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCtttt > 1:1301673/1‑150 (MQ=255) cccTGCACGTTCTCAGCACCGCTGGCACCCAGGATATCAACCAGTCCTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCg < 2:765475/150‑1 (MQ=255) ccTGCACGTTCTCAGCACCGCTGGCACCCAGGATATCAACCAGTCCTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGa > 2:4929014/1‑150 (MQ=255) ccTGCACGTTCTCAGCACCGCTGGCACCCAGGATATCAACCAGTCCTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGa > 2:4928707/1‑150 (MQ=255) cTGCACGTTCTCAGCACCGCTGGCACCCAGGATATCAACCAGTCCTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGTGTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGAc < 1:3456930/150‑1 (MQ=255) cACGTTCTCAGCACCGCTGGCACCCAGGATATCAACCAGTCCTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAAt < 1:4725231/150‑1 (MQ=255) cGTTCTCAGCACCGCTGGCACCCAGGATATCAACCAGTCCTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATaa > 1:3890041/1‑150 (MQ=255) cGTTCTCAGCACCGCTGGCACCCAGGATATCAACCAGTCCTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATaa > 2:3376719/1‑150 (MQ=255) ctcAGCACCGCTGGCACCCAGGATATCAACCAGTCCTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTc < 2:541239/150‑1 (MQ=255) tcAGCACCGCTGGCACCCAGGATATCAACCAGTCCTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCa < 2:3535726/150‑1 (MQ=255) cAGCACCGCTGGCACCCAGGATATCAACCAGTCCTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCAc < 1:808063/150‑1 (MQ=255) cACCGCTGGCACCCAGGATATCAACCAGTCCTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTa < 2:3585222/150‑1 (MQ=255) ccGCTGGCACCCAGGATATCAACCAGTCCTGCTTTGTTGATATCGCGAGGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAAc > 1:1872051/1‑150 (MQ=255) cGCTGGCACCCAGGATATCAACCAGTCCTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACg < 1:4283688/150‑1 (MQ=255) ggCACCCAGGATATCAACCAGTCCTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGtttt < 2:2324581/150‑1 (MQ=255) aCCCAGGATATCAACCAGTCCTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCAt < 2:3110392/150‑1 (MQ=255) ccAGGATCTCACCCAGTCCTGCTGTGTGGATATCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATaa < 2:3973398/150‑1 (MQ=255) cAGGATATCAACCAGTCCTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATaaa < 2:1417372/150‑1 (MQ=255) aGGATATCAACCAGTCCTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATaaaa > 1:2699139/1‑150 (MQ=255) aGGATATCAACCAGTCCTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATaaaa > 1:2159032/1‑150 (MQ=255) ggATATCAACCAGTCCTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAAc > 1:1525579/1‑150 (MQ=255) gATATCAACCAGTCCTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACt < 1:4596625/150‑1 (MQ=255) atatCAACCAGTCCTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGAGAGCTCACAGGTAGCATGAGAAAACTCGTGCTTCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACtt > 1:4800274/1‑150 (MQ=255) atCAACCAGTCCTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTc > 2:881252/1‑150 (MQ=255) cAACCAGTCCTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTccc < 1:4507877/150‑1 (MQ=255) aCCAGTCCTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGTGTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTg < 1:1396978/150‑1 (MQ=255) aCCAGTCCTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGTGTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTg < 1:4145394/150‑1 (MQ=255) cAGTCCTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCa > 1:3485193/1‑150 (MQ=255) gTCCTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAAt < 2:4480836/150‑1 (MQ=255) tCCTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAATg < 2:2260934/150‑1 (MQ=255) cTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGtt < 2:2960103/150‑1 (MQ=255) cTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGTGTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGtt < 2:1519958/150‑1 (MQ=255) gttgATATCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAg < 2:1260419/150‑1 (MQ=255) tgATATCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTa > 1:2310855/1‑150 (MQ=255) gATATCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTaa > 2:1639833/1‑150 (MQ=255) atatCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTaaa < 1:199341/150‑1 (MQ=255) atatCGCGATGGATAATCTTGGCGCCCAGTGATATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACATAACGTTTTCATAAAACTTTCACTGCAATGTTTATGGAGTaaa > 1:3543847/1‑150 (MQ=255) tatCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAg < 1:3771754/150‑1 (MQ=255) atCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGc > 1:4019094/1‑150 (MQ=255) tCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTTCTTTTAGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCg < 1:3579305/150‑1 (MQ=255) cgcgATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGa > 1:2501679/1‑150 (MQ=255) cgcgATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGa > 1:1011831/1‑150 (MQ=255) cgcgATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGa > 2:3860103/1‑150 (MQ=255) cgATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCCATGTTTATGGAGTAAAGCGAcc > 2:4368898/1‑150 (MQ=255) gATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGACCg > 1:1173290/1‑150 (MQ=255) aTGGATAATCTTGGCGCCCAGTGTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGACCGc > 1:4976287/1‑150 (MQ=255) ggATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGACCGcaa > 2:5050461/1‑150 (MQ=255) tAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGACCGcaacaa > 1:4868440/1‑150 (MQ=255) aaTCTTGGCGCCCAGTGTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGACCGCAACAAt > 1:1083648/1‑150 (MQ=255) aTCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGACCGCAACAATc > 1:3115818/1‑150 (MQ=255) tCTTGGCGCCCAGTGTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGACCGCAACAATCt > 2:2627172/1‑150 (MQ=255) tGGCGCCCTGTTTTTTTGCCTACAGCAAAGATGTGAGCACACCGGTAGAATGAGAAAACTCGTGCTGATTTTCGAAAATAATTTCACATAAGGTTTTCATAAAATTTTCCCTGAAATTTTTATGGAGTAAAGCGACCGCAACAATCTTaa < 1:2714009/150‑1 (MQ=255) cgcCCTGTTTTATTGCCGACAGCAACGCTGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACATAACGTTTTCATAAAACTTTCCCTGCAATGTTTTTGGAGTAAAGCGACCGCAACAATCTTAACaa < 1:4439429/150‑1 (MQ=255) cgcCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGACCGCAACAATCTTAACaa < 2:2543144/150‑1 (MQ=255) cgcCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGACCGCAACAATCTTAACaa > 1:4378931/1‑150 (MQ=255) cccAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGACCGCAACAATCTTAACAaat > 1:3336947/1‑150 (MQ=255) cAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGACCGCAACAATCTTAACAaataa < 2:128654/150‑1 (MQ=255) aGTGTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGACCGCAACAATCTTAACAaataat > 1:2953560/1‑150 (MQ=255) gTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGACCGCAACAATCTTAACAAATAAtc < 2:2794178/150‑1 (MQ=255) gTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGACCGCAACAATCTTAACAAATAAtc < 1:1214903/150‑1 (MQ=255) | GTGCTTTCAGTGCGGCTTTCAGTTTTTCATTAGCGAACAAGTCGAGTTTCTGCTGAACCTCGCCCTGCACGTTCTCAGCACCGCTGGCACCCAGGATATCAACCAGTCCTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGACCGCAACAATCTTAACAAATAATCTC > CP009273/4445189‑4445487 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |