| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 375,460 | A→C | 7.5% | intergenic (‑123/+65) | frmR ← / ← yaiO | regulator protein that represses frmRAB operon/outer membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 375,460 | 0 | A | C | 7.5% | 464.4 / 4.3 | 189 | intergenic (‑123/+65) | frmR/yaiO | regulator protein that represses frmRAB operon/outer membrane protein |
| Reads supporting (aligned to +/- strand): ref base A (125/42); new base C (2/18); total (128/61) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.96e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 196 total aligned reads displayed.
TTTCTTCTCTTCCGGAGTACTGGGCATTTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTACCACACTTTACCTGCCGTCA > CP009273/375311‑375610 | tttCTTCTCTTCCGGAGTACTGGGCATTTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACaa < 1:2343778/150‑1 (MQ=255) ttcttcTCTTCCGGAGTACTGGGCATTTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACaaa > 1:1660756/1‑150 (MQ=255) cttctcttcCGGAGTACTGGGCATTTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAaga > 1:1053880/1‑150 (MQ=255) cttctcttcCGGAGTACTGGGCATTTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAaga < 1:3629338/150‑1 (MQ=255) tctcttcCGGAGTACTGGGCATTTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAgg < 2:4770710/150‑1 (MQ=255) tcttcCGGAGTACTGGGCATTTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACATAGAGGaa < 2:4104991/150‑1 (MQ=255) tcttcCGGAGTACTGGGCATTTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGaa < 1:4467674/150‑1 (MQ=255) tcttcCGGAGTACTGGGCATTTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGaa < 2:5052059/150‑1 (MQ=255) cttcCGGAGTACTGGGCATTTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTCTTCTATATGTCAATGCATACCCCCCGATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGACAACCAAGAGGaca > 2:2255062/1‑148 (MQ=255) cttcCGGAGTACTGGGCATTTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGaaa < 2:1520192/150‑1 (MQ=255) cGGAGTACTGGGCATTTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑gggg > 1:260414/1‑150 (MQ=255) ggAGTACTGGGCATTTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑ggggg > 1:5109936/1‑150 (MQ=255) gAGTACTGGGCATTTCGCCCCTCATCATCGGCATGCAAGATACTATAGGGGGGTATTCTATATGTCACTGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAACGAGGAAA‑gggggg < 2:738368/150‑1 (MQ=255) gAGTACTGGGCATTTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑gggggg > 1:463361/1‑150 (MQ=255) aGTACTGGGCATTTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑ggggggg < 1:3688080/150‑1 (MQ=255) cTGGGCATTTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTCTTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑ggggggggggg > 1:1110275/1‑149 (MQ=255) cTGGGCATTTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAC‑GGGGGGGGGGc > 1:3304849/1‑150 (MQ=255) tGGGCATTTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGACA‑GGGGGGGGGGCt > 2:2838802/1‑150 (MQ=255) tGGGCATTTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGGCt > 2:4076650/1‑150 (MQ=255) gggCATTTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGGCTa > 2:1206671/1‑150 (MQ=255) aTTTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGGCTAATCg > 1:1935575/1‑150 (MQ=255) tttCGCACCTCATCATCTGCATGCAATTTACTAGAGGGGGTTTTTCTATATGTCAATGAATACCCCCCTATAGTATATAAAACTGGATAATAAAATTTATCGGGTGAATGTGGTCGGAAAACACCGCGGAAA‑GGGGGGGGGGCTAATCgg < 1:3806808/150‑1 (MQ=255) cGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGGCTAATCGGCAg > 1:2937635/1‑150 (MQ=255) gCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGGGCTAATCGGCAg > 1:4855120/1‑150 (MQ=255) cACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGGCTAATCGGCCggg > 2:4788348/1‑150 (MQ=255) aCCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGACAACAAAGAGGAAA‑GGGGGGGGGGCTAATCGGCAGGGa > 2:582521/1‑150 (MQ=255) aCCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGGCTAATCGGCCGGGa > 2:326255/1‑150 (MQ=255) ccTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGACTGTGGTCGGAAAACAAAGAGGAAA‑‑GGGGGGGGGCTAATCGGCAGGGAAg > 2:3913245/1‑150 (MQ=255) cTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGGCTAATCGGCAGGGAAg > 2:1048187/1‑150 (MQ=255) catcTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGGCTAATCGGCAGGGAAGgccgc > 1:2244492/1‑150 (MQ=255) atcTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGGCTAATCGGCCGGGAAGgccgcc > 2:1454091/1‑150 (MQ=255) atcTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGGCTAATCGGCAGGGAAGgccgcc > 2:2087554/1‑150 (MQ=255) cTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAATGAGGAAA‑GGGGGGGGGGCTAATCGGCAGGGTAGGCCGcccc > 2:880533/1‑150 (MQ=255) cTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGACA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGcccc > 1:77794/1‑150 (MQ=255) tgcatgcaCGAGACTATCGGGGGGTATTCGATCGGGCACTGCAGACCCCCCTATAGTATATAACACGGGCGAATAAAATTGAGCCGGTGACGGGGGGCGGCAACCACCCCGGAAC‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCg < 2:2493752/150‑1 (MQ=255) gcaggcaATATCCTATCGGGGGGTATTCTATATGTCAATGCAGACCCCCCTATAGTATAAACCCCTGGAGAATAAAAGTGACCCGGTGAATGGGGTCGGAAAACACAGCGCAAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCgg < 2:4586321/150‑1 (MQ=255) tgcaCTATACTATCGGGGGGTATTCTAAATGACAATGCATACCCCCATAAAGTATATAACACGGCACAAAAAAATGTCCCCGGTGCATGTGGTCGCAAAACAAAGCGGAAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATa < 2:3456044/150‑1 (MQ=255) tgcaATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGGGCTAATCGGAAGGGAAGGCCGCCCCGGAt > 1:4022110/1‑150 (MQ=255) tgcaATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATa > 1:3321654/1‑150 (MQ=255) tgcaAGAGACTCTCGGGGGGTATTCTATCTGTCAAGGCATACCCCCCTATAGTATATCACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGCGGAAA‑GGGGGGGGGGCTACTCGGCAGGGAAGGCCGCCCCGGATa < 2:4470718/150‑1 (MQ=255) ataCTCTCGGGGGGTATCCCATAGTTCCACGCAAACCCCCCTATAGTATAAAACACTGGAGAAAAAACATGAACCGGTGAATGTGGCCGGAAACCAAAGACGAAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAgcgggc < 2:3673142/150‑1 (MQ=255) tacgagaGGGGGGTATTCTACAGGACAATGCATCCCCCCCTATAGTATATACCCCTGGAGAATAACATTGATCCGGTGAATGTGGTCGGAAACCACCCAGGAAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAgcgggcg < 2:2997489/144‑1 (MQ=255) taCTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAgcgggc > 1:890210/1‑150 (MQ=255) cactagcggggggTATTCTAAATGACAAGGCATACCCCCCCATAGAAAACACCCCGGGAGAAAAAACTTTCCCCGCTCACGGGGGCCGGAAAACACCGACGAAA‑GCGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAgcgggcg < 2:4255195/143‑1 (MQ=255) cccacccgggggTCTTCTACATCTCCCTGCATCCCCCCCGAGAGTAGATCCCCCCGGAGAAAAAAAGTCATCCGGCGACGGGGCACGGAAAACCCCCACCAAC‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAgcgggcgg < 2:3372943/143‑1 (MQ=255) cTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGggcggc > 1:157571/1‑150 (MQ=255) ataGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAg > 1:2404056/1‑150 (MQ=255) aGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGaa > 2:3844692/1‑150 (MQ=255) ggggggTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAg > 1:5050608/1‑150 (MQ=255) gggTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAAt < 1:709896/150‑1 (MQ=255) ttCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGa > 2:2829256/1‑150 (MQ=255) tCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGaa > 1:3074524/1‑150 (MQ=255) tataTGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAAtt > 1:1873624/1‑150 (MQ=255) tagatGTCAATGCATACCCCCCTATCTTATATAACACTGGAGAATAAATTTTTTCAGGTGATTGTGGGCGGAAAACAAAGCGGTAC‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAAtt < 2:2960164/147‑1 (MQ=255) atatGCCAATGCAAACCCCCCGATAGAATATAACACTGGAGAATAAACTTTATCCGGTGAATGTGGCCGCAAAACACCGCCGAAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAAttt < 2:1779251/150‑1 (MQ=255) cAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAgg > 1:580691/1‑150 (MQ=255) cAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGGGGGCGGCAGAAGGAATCAGAATTTCCCGGt > 2:2054687/1‑150 (MQ=255) cAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTc > 1:2574451/1‑150 (MQ=255) gCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGTGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGa > 1:4792369/1‑150 (MQ=255) cATACCCCCCTATAGGATATAACCCTGGAGAATAAAAATTATCCGGGGAATGTGGTCGGAACACAAACACGAAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGAc < 2:4556781/150‑1 (MQ=255) aTACCCCCCTATTGTATATTACACTGGAGTATAAAATTTATCCGGGGAAAGTGGGCGGAAAACCACGCGGCAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACg < 2:4186774/150‑1 (MQ=255) aTACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGACGGACTCAGAATTTCCAGGTCAGAc > 2:764334/1‑150 (MQ=255) aTACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACg > 1:318617/1‑150 (MQ=255) tACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTACCAGGTCAGACgg > 2:3316823/1‑150 (MQ=255) cccccTATAGTATATAACACTGGAGACTCACATTTATCCGCTGAATGTGGTCGGAAACCCACGAGGACA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCt < 2:1112438/150‑1 (MQ=255) ccccTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTg > 1:616626/1‑150 (MQ=255) ataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGAcc < 2:1541102/150‑1 (MQ=255) taACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGAcc > 2:648452/1‑150 (MQ=255) aaCACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAC‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCTGACCg > 2:137143/1‑150 (MQ=255) cTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACCCAGAGGAAC‑GGGGGGGGGGGTACTCGGGAGGGATGGCCGCCCCGGATCGCGGGCGGCAGCAGGAATCAGAATTTCCCGGTCAGACGGGCTGCAAGGTGCAGACAGTTaa > 2:2683110/1‑150 (MQ=255) tGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTaaa > 1:2917135/1‑150 (MQ=255) tAAAAATTATCCGGTGAACCTGGTCGGAAAACCCCCCGGAAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCg < 2:3803153/150‑1 (MQ=255) aTTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTg > 1:4655153/1‑150 (MQ=255) tcgccGGTGCATGTGGCCCGCAACCAACGCGGACA‑GGGGGGGGGGCTACTCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTgggg < 2:4193598/147‑1 (MQ=255) tATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTggg > 1:2658609/1‑150 (MQ=255) aTCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGgt > 1:5069691/1‑150 (MQ=255) aTCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGACTCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGgtg > 2:1790458/1‑150 (MQ=255) tCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGgtg > 1:341692/1‑150 (MQ=255) cGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGGCTAATCGGCCGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCACGTTGCAGACCGTTACTATCATCGGTTGGGGTGTc > 2:3966655/1‑150 (MQ=255) cGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTc > 1:1012442/1‑150 (MQ=255) cGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAAATTCCAGGTCAGACGGGCTGCAACTTGCAGACCGTTAAAATCATAGGTTGGGGTGTc > 1:606830/1‑150 (MQ=255) acggtgGGCGGAAAACACAGGGGAAA‑GGGGGGGGCGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCAGCGGTTGGGGTGTCGTAcc < 2:192756/147‑1 (MQ=255) tgtgGGCGGAACACAAAGAGGACA‑GGCGGGGGGGCTAATCGGCAGTGAAGGCCGCCCCGGATAGCGGGCGTCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTACcac < 2:4332089/150‑1 (MQ=255) gTCGGAAAACAAAGAGGAAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTACCACACtt > 1:1562424/1‑150 (MQ=255) tCGGAACACACAGCGGAAA‑‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTACCACACTTTa < 1:3913245/150‑1 (MQ=255) tCGGAAAACAAAGAGGAAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGATGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTACCACACttt > 1:997418/1‑150 (MQ=255) cGGAAAACAAAGAGGAAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTACCACACTTTa > 1:4261077/1‑150 (MQ=255) ggAAAACAAAGAGGAAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTACCACACATTAc > 1:663607/1‑150 (MQ=255) gAAAACAAAGAGGAAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTACCACACTTTAcc > 1:3120471/1‑150 (MQ=255) aaaaCAAAGAGGAAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTACCACACTTTACCt > 1:4460873/1‑150 (MQ=255) aaaaCAAAGAGGAAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTACCACACTTTACCt > 1:47709/1‑150 (MQ=255) aaaaCAAAGAGGAAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTACCACACTTTACCt > 2:5091247/1‑150 (MQ=255) aaaCAAAGAGGAAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCATACCGTTAAAATCAACGGTTGGGGTGTCGTACCACACTTTACATg > 1:4114612/1‑150 (MQ=255) aacaacGAGGAAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTACCACACTTTACCTGc > 2:2538145/1‑150 (MQ=255) aaCAAAGAGGAAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATAATCGGTTGGGGTGGAGTACCACACTTTACCTGc > 2:3190860/1‑150 (MQ=255) aaCAAAGAGGAAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGAAGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTACCACACTTTACCTGc > 1:947398/1‑150 (MQ=255) aCAAAGAGGAAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTACCACACTTTACCTGcc > 1:1986823/1‑150 (MQ=255) cAAAGAGGAAA‑GGGGGGGTGGATAATCGGCAGGGAAGGCCGCCCCGCATATCGGGCGGCAGAAGGAATCACAATTTCCAGGTCAGACGGGCTTCAAGTTGCATACCGTTAAAATCAACGGTTGGGGTGTCGTACCAAACATTACCTGCCg > 2:997114/1‑150 (MQ=255) aaaGAGGAAAGGGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTACCACACTTTACCTGCCg > 1:3797855/1‑150 (MQ=255) aaaGAGGAAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTACCACACTTTACCTGCCGt > 2:672377/1‑150 (MQ=255) | TTTCTTCTCTTCCGGAGTACTGGGCATTTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTACCACACTTTACCTGCCGTCA > CP009273/375311‑375610 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |