| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 648,056 | C→A | 100% | F122L (TTC→TTA) | citA → | sensory histidine kinase in two‑component regulatory system with CitB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 648,056 | 0 | C | A | 100.0% | 1037.7 / NA | 308 | F122L (TTC→TTA) | citA | sensory histidine kinase in two‑component regulatory system with CitB |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (161/147); total (161/147) | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 308 total aligned reads displayed.
GGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTCACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACGATGGAAAAGTCATCGGCGTGGTGTCGATTGGCTACCTGGTGAGTAA > CP009273/647909‑648202 | gTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTAAcc < 2:4559729/150‑1 (MQ=255) gTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTAAcc > 2:2405940/1‑150 (MQ=255) tGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTAACCa < 2:3343709/150‑1 (MQ=255) tGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTAACCa > 1:2628472/1‑150 (MQ=255) tGAAAACGCGTGACTACAAAATTCTGGCGACCATCGCTAACAAATTACAAAGAGATACAGATTTTGATTATGTGGTGATTGTGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTAACCa < 2:1114317/150‑1 (MQ=255) gAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTAACCaa > 2:3159142/1‑150 (MQ=255) aaaaCGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTAACCaaa > 2:3252183/1‑150 (MQ=255) cgcgTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTAACCAAACAgg < 1:2733334/150‑1 (MQ=255) gTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTAACCAAACAGGgcg > 2:2923160/1‑150 (MQ=255) gTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTAACCAAACAGGgcg > 1:424596/1‑150 (MQ=255) gTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTAACCAAACAGGgcg > 2:4190948/1‑150 (MQ=255) gTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTAACCAAACAGGgcg > 2:4732672/1‑150 (MQ=255) gTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTAACCAAACAGGgcg > 1:1180207/1‑150 (MQ=255) gACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTAACCAAACAGGgcgcg > 2:4600399/1‑150 (MQ=255) cTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTAACCAAACAGGGCGCGCt < 2:3732481/150‑1 (MQ=255) tACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTAACCAAACAGGGCGCGCTg < 1:4831220/150‑1 (MQ=255) aaaCGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTAACCAAACAGGGCGCGCTGgag > 1:1388484/1‑150 (MQ=255) aaCGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTAACCAAACAGGGCGCGCTGgaga < 2:3909228/150‑1 (MQ=255) ggCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTAACCAAACAGGGCGCGCTGGAGAAAg < 1:3406840/150‑1 (MQ=255) tGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTAACCAAACAGGGCGCGCTGGAGAAAgggg > 1:2043736/1‑150 (MQ=255) gACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTAACCAAACAGGGCGCGCTGGAGAAAGGGGagag > 2:4765659/1‑150 (MQ=255) ccATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTAACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCt > 2:5019097/1‑150 (MQ=255) ccATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTAACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCt > 2:3857009/1‑150 (MQ=255) taTCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTAACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTa > 2:2459091/2‑150 (MQ=255) cATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTAACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTa > 1:2386563/1‑150 (MQ=255) cATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTAACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTa > 2:858119/1‑150 (MQ=255) cATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTAACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTa < 2:5144212/150‑1 (MQ=255) tCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTAACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACt < 1:93253/150‑1 (MQ=255) tAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTAACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCAt < 1:3819326/150‑1 (MQ=255) aCAAATTACAAAGAGATACCGATTTTGATTATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTAACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTa > 1:3662790/1‑150 (MQ=255) aCAAATTACAAAGAGATACCGATTTTGATTATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTAACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTa < 2:3596424/150‑1 (MQ=255) aaaTTACAAAGAGATACCGATTTTGATTATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTAACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTAcc > 2:4375883/1‑150 (MQ=255) taTTACAAAGAGATACCTATTTTGATTATGTGGTGATTGGGGACCGGCTCTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTAACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTACCg < 2:2817803/149‑1 (MQ=255) aaTTACAAAGAGATACCGATTTTGATTATATGGTGATTGGGGACCTGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTTGTTATACTATGCAGTTAACCAAACAGGGCGCGCAGGAGAAAGGGGAGAGCTACTTCATTACCg > 2:5095458/1‑150 (MQ=255) tACAAAGAGATACCGATTTTGATTATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTAACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTACCGGGa < 1:43446/150‑1 (MQ=255) aCAAAGAGATACCGATTTTGATTATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTAACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTACCGGGaa > 1:749407/1‑150 (MQ=255) aCAAAGAGATACCGATTTTGATTATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTAACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTACCGGGaa > 1:1082792/1‑150 (MQ=255) agagATACCGATTTTGATTATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTAACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTACCGGGAAAggg < 2:4124060/150‑1 (MQ=255) agagATACCGATTTTGATTATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTAACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTACCGGGAAAggg > 1:277046/1‑150 (MQ=255) agagATACCGATTTTGATTATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTAACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTACCGGGAAAggg < 2:161702/150‑1 (MQ=255) gagaTACCGATTTTGATTATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTAACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCCACTTCATTACCGGGAAAGGGt < 1:550307/150‑1 (MQ=255) gaTACCGATTTTGATTATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTAACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTACCGGGAAAGGGTCa > 1:1624566/1‑150 (MQ=255) aCCGATTTTGATTATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTAACCAAACAGGGCGCGCTGGCGAAAGGGGAGAGCTACTTCATTACCGGGAAAGGGTccagg > 2:4824379/1‑146 (MQ=255) aCCGATTTTGATTATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTAACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTACCGGGAAAGGGTCAATg < 2:2121543/150‑1 (MQ=255) ccGATTTTGATTATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTAACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTACCGGGAAAGGGTCAATgg < 2:4965625/150‑1 (MQ=255) cGATTTTGATTATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTAACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTACCGGGAAAGGGTCAATggg > 2:2758623/1‑150 (MQ=255) ttttGATTATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTAACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTACCGGGAAAGGGTCAATGGGGAt < 1:5100871/150‑1 (MQ=255) ttGATTATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTAACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTACCGGGAAAGGGTCAATGGGGATgg > 1:624312/1‑150 (MQ=255) tGATTATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTAACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTACCGGGAAAGGGTCAATGGGGATGGc < 2:168010/150‑1 (MQ=255) gATTATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTAACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTACCGGGAAAGGGTCAATGGGGATGGCg < 2:2234269/150‑1 (MQ=255) gATTATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTAACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTACCGGGAAAGGGTCAATGGGGATGGCg < 2:2194215/150‑1 (MQ=255) gATTATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTAACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTACAGGGAAAGGGTCAATGGGGATGGCg < 2:137491/150‑1 (MQ=255) aTTATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTAACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTACCGGGAAAGGGTCAATGGGGATGGCGa > 1:2997287/1‑150 (MQ=255) ttATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATACTAATCCTGAGAAAATTGGTTATCCTAGGCAGTTAACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTACCGGGAAAGGGTCAATGGGTATGGCTAt < 2:3128369/150‑1 (MQ=255) tATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTAACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTACCGGGAAAGGGTCAATGGGGATGGCGATg > 1:2072713/1‑150 (MQ=255) tATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTAACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTACCGGGAAAGGGTCAATGGGGATGGCGATg < 2:4085627/150‑1 (MQ=255) gtggtgATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTAACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTACCGGGAAAGGGTCAATGGGGATGGCGATgcgc < 2:1587408/150‑1 (MQ=255) tggtgATTGGGGACCGGCACTCGATCCGCCTTTACCAACCTAATCCGGAGAAAAATGGTTATCCTATGCAGTTAACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTACCGGGAAAGGGTCAATGGGGATGGCGATgcgcg > 1:4102829/1‑150 (MQ=255) tgATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTAACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCa > 1:496995/1‑150 (MQ=255) ttGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTAACCAAACCGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCaaaa < 2:1426301/150‑1 (MQ=255) gggACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTAACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTACCTGGAAAGGGACAAAGGGGATGGCGATGCGCGCCAAAACGc > 1:4846179/1‑150 (MQ=255) ccGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTAACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTACCGGGAAAGGGTCAATGGGGATGGCGTTGCGCGCCAAAACGCCAAt < 1:4504625/150‑1 (MQ=255) ccGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTAACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAAt < 1:847965/150‑1 (MQ=255) cGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTAACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTACAGGGAAAGGGTCAATTGTGATGGCGATGCGCGCCAAAACGCCAATc > 2:1787095/1‑150 (MQ=255) ggCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTAACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCt > 2:3817112/1‑150 (MQ=255) ggCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTAACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCt > 2:1268386/1‑150 (MQ=255) aCTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTAACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTtg < 2:2791971/150‑1 (MQ=255) cGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTAACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTtgatg > 1:1910542/1‑150 (MQ=255) gATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTAACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTtgatga > 2:585346/1‑150 (MQ=255) gATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTAACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTtgatga < 1:471614/150‑1 (MQ=255) gATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTAACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTtgatga > 1:1005878/1‑150 (MQ=255) gCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTAACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACGATg > 1:2520887/1‑150 (MQ=255) ttACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTAACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACGATGGaaa < 2:1944088/150‑1 (MQ=255) tACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTAACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACGATGGaaaa > 1:353126/1‑150 (MQ=255) tACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTAACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACGATGGaaaa > 2:1707083/1‑150 (MQ=255) aTCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTAACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACGATGGAAAAGTCa < 1:2459091/150‑1 (MQ=255) ccTAATCCGGAGAAAATTGGTTATCCTATGCAGTTAACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACGATGGAAAAGTCATc > 1:3709792/1‑150 (MQ=255) tCCGGAGAAAATTGGTTATCCTATGCAGTTAACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACGATGGAAAAGTCATCGGCgt > 1:1838086/1‑150 (MQ=255) cGGAGAAAATTGGTTATCCTATGCAGTTAACCAAACAGTGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACGATGGAAAAGTCATCGGCgttg < 1:5115079/150‑3 (MQ=255) cGGAGAAAATTGGTTATCCTATGCAGTTAACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACGATGGAAAAGTCATCGGCgtgg > 1:712498/1‑150 (MQ=255) gagaAAATTGGTGATCCTATGCAGGTAACCAACCAGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACGATGGAAAAGTCATCGGCgtggtg < 2:3014867/150‑1 (MQ=255) gaAAATTGGTTATCCTATGCAGTTAACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACGATGGAAAAGTCATCGGCGTGGTGTc > 2:658268/1‑150 (MQ=255) aaaaTTGGTTATCCTATGCAGTTAACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACGATGGAAAAGTCATCGGCGTGGTGTCg > 1:5012944/1‑150 (MQ=255) aaaTTGGTTATCCTATGCAGTTAACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACGATGGAAAAGTCATCGGCGTGGTGTCGa > 2:2697817/1‑150 (MQ=255) aTTGGTTATCCTATGCAGTTAACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACGATGGAAAAGTCATCGGCGTGGTGTCGAtt < 2:4990159/150‑1 (MQ=255) tGGTTATCCTATGCAGTTAACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACGATGGACAAGTCATCGGCGTGGTGTCGATTgg > 2:396458/1‑150 (MQ=255) tGGTTATCCTATGCAGTTAACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACGATGGAAAAGTCATCGGCGTGGTGTCGATTgg > 1:966059/1‑150 (MQ=255) ggTTATCCTATGCAGTTAACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACGATGGAAAAGTCATCGGCGTGGTGTCGATTGGc > 1:3202329/1‑150 (MQ=255) ggTTATCCTATGCAGTTAACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACGATGGAAAAGTCATCGGCGTGGTGTCGATTGGc < 1:3919199/150‑1 (MQ=255) ggTTATCCTATGCAGTTAACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACGATGGAAAAGTCATCGGCGTGGTGTCGATTGGc > 1:5138605/1‑150 (MQ=255) gTTATCCTATGCAGTTAACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACGATGGAAAAGTCATCGGCGTGGTGTCGATTGGCt > 2:3533321/1‑150 (MQ=255) ttATCCTATGCAGTTAACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACGATGGAAAAGTCATCGGCGTGGTGTCGATTGGCTa < 1:4873269/150‑1 (MQ=255) tATCCTATGCAGTTAACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACGATGGAAAAGTCATCGGCGTGGTGTCGATTGGCTAc < 1:1786117/150‑1 (MQ=255) tCCTATGCAGTTAACCAACCAGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACGATGGAAAAGTCATCGGCGTGGTGTCGATTGGCTACCt < 2:905863/150‑1 (MQ=255) ccTATGCAGTTAACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACGATGGAAAAGTCATCGGCGTGGTGTCGATTGGCTACCTg < 1:2900831/150‑1 (MQ=255) ccTATGCAGTTAACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACGATGGAAAAGTCATCGGCGTGGTGTCGATTGGCTACCTg > 2:188020/1‑150 (MQ=255) tATGCAGTTAACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACGATGGAAAAGTCATCGGCGTGGTGTCGATTGGCTACCTGGt > 2:1155157/1‑150 (MQ=255) tGCAGTTAACCAACCAGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACGATGGAAAAGTCATCGGCGTGGTGTCGATTGGCTACCTGGTGa < 2:1806331/150‑1 (MQ=255) tGCAGTTAACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACGATGGAAAAGTCATCGGCGTGGTGTCGATTGGCTACCTGGTGa > 1:4936508/1‑150 (MQ=255) cAGTTAACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACGATGGAAAAGTCATCGGCGTGGTGTCGATTGGCTACCTGGTGAGt > 1:4628402/1‑150 (MQ=255) | GGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTCACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACGATGGAAAAGTCATCGGCGTGGTGTCGATTGGCTACCTGGTGAGTAA > CP009273/647909‑648202 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |