Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 838,652 T→G 18.1% F289V (TTT→GTT)  rlmF → 23S rRNA m(6)A1618 methyltransferase, SAM‑dependent

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP009273838,6520TG18.1% 437.8 / 35.9 244F289V (TTT→GTT) rlmF23S rRNA m(6)A1618 methyltransferase, SAM‑dependent
Reads supporting (aligned to +/- strand):  ref base T (81/114);  new base G (47/2);  total (128/116)
Fisher's exact test for biased strand distribution p-value = 2.18e-13
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 258 total aligned reads displayed.

AGAGCAAAGGCTTCGCGAAGCAGGTGATGTGGTTTACATCACTGGTATCTCGTGGTGAAAACTTACCGCCGTTGTATCGTGCCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCCTGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGTTCCCCCGGCGGTAACGGTTCAGCCGGGGTCGCGCCCGGAGCAGGCAGCACCTGATAAGTCTGCACTGGCGCGCGAACG  >  CP009273/838503‑838801
                                                                                                                                                      |                                                                                                                                                         
agagCAAAGGCTTCGCGAAGCAGGTGATGTGGTTTACATCACTGGTATCTCGTGGTGAAAACTTACCGCCGTTGTATCGTGCCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCt                                                                                                                                                           >  2:214606/1‑150 (MQ=255)
agagCAAAGGCTTCGCGAAGCAGGTGATGTGGTTTACATCACTGGTATCTCGTGGTGAAAACTTACCGCCGTTGTATCGTGCCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCt                                                                                                                                                           >  1:3861005/1‑150 (MQ=255)
 gagCAAAGGCTTCGCGAAGCAGGTGATGTGGTTTACATCACTGGTATCTCGTGGTGAAAACTTACCGCCGTTGTATCGTGCCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCtt                                                                                                                                                          <  1:2635380/150‑1 (MQ=255)
  agCAAAGGCTTCGCGAAGCAGGTGATGTGGTTTACATCACTGGTATCTCGTGGTGAAAACTTACCGCCGTTGTATCGTGCCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCttt                                                                                                                                                         >  2:1250867/1‑150 (MQ=255)
   gCAAAGGCTTCGCGAAGCAGGTGATGTGGTTTACATCACTGGTATCTCGTGGTGAAAACTTACCGCCGTTGTATCGTGCCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTa                                                                                                                                                        >  1:2522299/1‑150 (MQ=255)
    cAAAGGCTTCGCGAAGCAGGTGATGTGGTTTACATCACTGGTATCTCGTGGTGAAAACTTACCGCCGTTGTATCGTGCCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCGTTAt                                                                                                                                                       >  2:616293/1‑150 (MQ=255)
     aaaGGCTTCGCGAAGCAGGTGATGTGGTTTACATCACTGGTATCTCGTGGTGAAAACTTACCGCCGTTGTATCGTGCCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTAtt                                                                                                                                                      >  2:4710736/1‑150 (MQ=255)
      aaGGCTTCGCGAAGCAGGTGATGTGGTTTACATCACTGGTATCTCGTGGTGAAAACTTACCGCCGTTGTATCGTGCCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTAttt                                                                                                                                                     >  1:320688/1‑149 (MQ=255)
        ggCTTCGCGAAGCAGGTGATGTGGTTTACATCACTGGTATCTCGTGGTGAAAACTTACCGCCGTTGTATCGTGCCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGcc                                                                                                                                                   <  2:1392286/150‑1 (MQ=255)
        ggCTTCGCGAAGCAGGTGATGTGGTTTACATCACTGGTATCTCGTGGTGAAAACTTACCGCCGTTGAATCGTGCCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCGTTATTGcc                                                                                                                                                   >  2:4195679/1‑150 (MQ=255)
         gCTTCGCGAAGCAGGTGATGTGGTTTACATCACTGGTATCTCGTGGTGAAAACTTACCGCCGTTGTATCGTGCCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCCt                                                                                                                                                  <  2:403469/150‑1 (MQ=255)
         gCTTCGCGAAGCAGGTGATGTGGTTTACATCACTGGTATCTCGTGGTGAAAACTTACCGCCGTTGTATCGTGCCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCCt                                                                                                                                                  <  2:2175791/150‑1 (MQ=255)
          cTTCGCGAAGCAGGTGATGTGGTTTACATCACTGGTATCTCGTGGTGAAAACTTACCGCCGTTGTATCGTGCCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCCTg                                                                                                                                                 <  1:4009926/150‑1 (MQ=255)
             cgcgAAGCAGGTGATGTGGTTTACATCACTGGTATCTCGTGGTGAAAACTTACCGCCGTTGTATCGTGCCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCGTTATTGCCTGGAc                                                                                                                                              >  1:1593046/1‑150 (MQ=255)
              gcgAAGCAGGTGATGTGGTTTACATCACTGGTATCTCGTGGTGAAAACTTACCGCCGTTGTATCGTGCCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCCTGGAcc                                                                                                                                             <  2:3285459/150‑1 (MQ=255)
              gcgAAGCAGGTGATGTGGTTTACATCACTGGTATCTCGTGGTGAAAACTTACCGCCGTTGTATCGTGCCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCCTGGAcc                                                                                                                                             <  2:700063/150‑1 (MQ=255)
              gcgAAGCAGGTGATGTGGTTTACATCACTGGTATCTCGTGGTGAAAACTTACCGCCGTTGTATCGTGCCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCCTGGAcc                                                                                                                                             >  2:2539964/1‑150 (MQ=255)
               cgAAGCAGGTGATGTGGTTTACATCACTGGTATCTCGTGGTGAAAACTTACCGCCGTTGTATCGTGCCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCCTGGAcca                                                                                                                                            <  2:1970330/150‑2 (MQ=255)
                gAAGCAGGTGATGTGGTTTACATCACTGGTATCTCGTGGTGAAAACTTACCGCCGTTGTATCGTGCCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCGTTAATGCCTTGAccat                                                                                                                                           >  2:656098/1‑148 (MQ=255)
                 aaGCAGGTGATGTGGTTTACATCACGGGTATCTCGTGGTGAAAACTTACCGCCGTTGTATCGTGCCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCCTGGACCttt                                                                                                                                          <  1:4435977/150‑1 (MQ=255)
                  aGCAGGTGATGTGGTTTACATCACTGGTATCTCGTGGTGAAAACTTACCGCCGTTGTATCGTGCCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTTCCAGGACCATTa                                                                                                                                         >  2:2661138/1‑150 (MQ=255)
                     aGGTGATGTGGTTTACATCACTGGTATCTCGTGGTGAAAACTTACCGCCGTTGTATCGTGCCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCCTGGACCTTTATGa                                                                                                                                      <  1:2069842/150‑1 (MQ=255)
                       gTGATGTGGTTTACATCACTGGTATCTCGTGGTGAAAACTTACCGCCGTTGTATCGTGCCCTGACGGACGTGGGCGCGGTGAAGGTGGTTCAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCGTTATTGCCTGGACCTTTATGAac                                                                                                                                    >  2:5116575/1‑150 (MQ=255)
                       gTGATGTGGTTTACATCACTGGTATCTCGTGGTGAAAACTTACCGCCGTTGTATCGTGCCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCCTGGACCTTTATGAac                                                                                                                                    <  1:5065312/150‑1 (MQ=255)
                       gTGATGTGGTTTACATCACTGGTATCTCGTGGTGAAAACTTACCGCCGTTGTATCGTGCCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCGTTATTGCCAGGTCCGTTTTGaaa                                                                                                                                    >  1:3742446/1‑149 (MQ=255)
                       gTGATGTGGTGTACATCACTGGTATCTCGTGGTGAAAACTTACCGCCGTTGTATCGTGCCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCCTGGACCTTTATGAac                                                                                                                                    <  2:2089973/150‑1 (MQ=255)
                        tGATGTGGTTTACATCACTGGTATCTCGTGGTGAAAACTTACCGCCGTTGTATCGTGCCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTTCCTGGGCCGTTATGaaag                                                                                                                                   >  1:4711913/1‑148 (MQ=255)
                        tGATGTGGTTTACATCACTGGTATCTCGTGGTGAAAACTTACCGCCGTTGTATCGTGCCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCCTGGACCTTTATGAacg                                                                                                                                   <  1:1062047/150‑1 (MQ=255)
                          aTGTGGTTTACATCACTGGTATCTCGTGGTGAAAACTTACCGCCGTTGTATCGTGCCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCGTTTTTTGCTGGCGCCTTTTTGaagac                                                                                                                                  >  1:1764102/1‑147 (MQ=255)
                          aTGTGGTTTACATCACTGGTATCTCGTGGTGAAAACTTACCGCCGTTGTATCGTGCCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTTCCGGGACCTTTATGTacgac                                                                                                                                 >  1:2499003/1‑150 (MQ=255)
                          aTGTGGTTTACATCACTGGTATCTCGTGGTGAAAACTTACCGCCGTTGTATCGTGCCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCCTGGACCTTTATGAacgac                                                                                                                                 <  2:1848340/150‑1 (MQ=255)
                           tgtgGTTTACATCACTGGTATCTCGTGGTGAAAACTTACCGCCGTTGTATCGTGCCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCCTGGACCTTTATGAacgacg                                                                                                                                <  1:1879669/150‑1 (MQ=255)
                            gtgGTTTACATCACTGGTATCTCGTGGTGAAAACTTACCGCCGTTGTATCGTGCCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCCTGGACCTTTATGAAcgacga                                                                                                                               <  1:4292359/150‑1 (MQ=255)
                            gtgGTTTACATCACTGGTATCTCGTGGTGAAAACTTACCGCCGTTGTATCGTGCCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCCTGGACCATTATGAAcgacga                                                                                                                               >  2:1668953/1‑150 (MQ=255)
                               gTTTACATCACTGGTATCTCGTGGTGAAAACTTACCGCCGTTGTATCGTGCCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCCTGGACCTTTATGAACGACGagca                                                                                                                            <  1:1706268/150‑1 (MQ=255)
                                    cATCACTGGTATCTCGTGGTGAAAACTTACCGCCGTTGTATCGTGCCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCCTGGTCCGTTATGAAACACGCGCAGcgcc                                                                                                                      >  2:2445804/1‑150 (MQ=255)
                                     aTCACTGGTATCTCGTGGTGAAAACTTACCGCCGTTGTATCGTGCCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCCTGGACCTTTATGAACGACGAGCAGcgccg                                                                                                                     <  2:4629136/150‑1 (MQ=255)
                                      tCACTGGTATCTCGTGGTGAAAACTTACCGCCGTTGTATCGTGCCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTTCCAGGAACATTATTAAACAAGAGCAGcgccgc                                                                                                                    >  1:667723/1‑150 (MQ=255)
                                      tCACTGGTATCTCGTGGTGAAAACTTACCGCCGTTGTATCGTGCCCGGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCCTGGACCTTTATGAACGACGAGCAGcgccgc                                                                                                                    <  2:3401860/150‑1 (MQ=255)
                                       cACTGGTATCTCGTGGTGAAAACTTACCGCCGTTGTATCGTGCCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCCTGGACCTTTATGAACGACGAGCAGCgccgcc                                                                                                                   <  2:854133/150‑1 (MQ=255)
                                        aCTGGTATCTCGTGGTGAAAACTTACCGCCGTTGTATCGTGCCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTTCCTGGAACTTTATGAACGAAGAGCAGCGccgccg                                                                                                                  >  2:2991596/1‑150 (MQ=255)
                                           ggTATCTCGTGGTGAAAACTTACCGCCGTTGTATCGTGCCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCGTTATTTCCGGGACCTTTATGAACGACGCGCAGCgccgcccgtt                                                                                                               >  2:4027267/1‑146 (MQ=255)
                                             tATCTCGTGGTGAAAACTTACCGCCGTTGTATCGTGCCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCCTGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTg                                                                                                             >  2:1212084/1‑150 (MQ=255)
                                               tctcGTGGTGAAAACTTACCGCCGTTGTATCGTGCCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCGTTATTGCCTGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTc                                                                                                           >  2:4958892/1‑150 (MQ=255)
                                                ctcGTGGTGAAAACTTACCGCCGTTGTATCGTGCCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTTTTTCCTGGTCCATTTTTAACGAAGAGCAGCGCCGCCGTTTTGtaa                                                                                                          >  1:287333/1‑148 (MQ=255)
                                                ctcGTGGTGAAAACTTACCGCCGTTGTATCGTGCCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTTCCTGGCCCTTTATTAAAGAAGAGCACCGCCGCCCttttttaa                                                                                                          >  1:2697778/1‑146 (MQ=255)
                                                    tggtgAAAACTTACCGCCGTTGTATCGTGCCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTTGATGGAACGTTATGTAAGACCATCAGCGCCCCCGGTTTTTCAAtat                                                                                                      >  1:912758/1‑148 (MQ=255)
                                                    tggtgAAAACTTACCGCCGTTGTAGCGTGCCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCCTGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCg                                                                                                      <  2:3230133/150‑1 (MQ=255)
                                                       tgAAAACTTACCGCCGTTGTATCGTGCCCTGACGGACGTGGGCGCGGTGACGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCCAGGACCGTTATGTAAGACGAGCAGCGCCCCCGGTTTGTGACTCGccc                                                                                                   >  2:2630688/1‑149 (MQ=255)
                                                        gAAAACTTACCGCCGTTGTATCGTGCCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCCTGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAg                                                                                                  <  2:832994/150‑1 (MQ=255)
                                                        gAAAACTTACCGCCGTTGTATCGTGCCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCCAGGACCGTTATTAAACACGAGCAGCGCCCCCCTTTTGGGAATCGCCac                                                                                                  >  1:4346017/1‑149 (MQ=255)
                                                            aCTTACCGCCGTTGTATCGTGCCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTTCCTGGACCGTTATGAACGACGATCAGCGCCGCCGGTTTGTCAATCGCCACCggt                                                                                              >  2:2332909/1‑148 (MQ=255)
                                                             cTTACCGCCGTTGTATCGTGCCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCCTGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTa                                                                                             <  1:4086761/150‑1 (MQ=255)
                                                                   gccgTTGTATCGTGCCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCCTGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGt                                                                                     <  2:3351316/150‑1 (MQ=255)
                                                                       ttGTATCGTGCCCTGACGGACGTGGGCGCTGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGACGCGTTAAAGGCTGGACCATAATGAACCACCACCAGAGCCCCCCTTTTGTAAAACGCCCGCCTTAAATCCTTGGt                                                                                 >  2:2312605/1‑150 (MQ=255)
                                                                       ttGTATCGTGCCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCCTGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGt                                                                                 <  1:214606/150‑1 (MQ=255)
                                                                         gTATCGTGCCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCCTGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGTTc                                                                              <  2:4496794/150‑1 (MQ=255)
                                                                             cGTGCCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAATAGCAGAGTCGCTTTAGTGCCTGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGTTccccc                                                                          <  2:1349257/150‑1 (MQ=255)
                                                                             cGTGCCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCCGGGACCATTATGAACGACGAGCCGCGCCCCCGGTTTGTCAAACGCCAGCGGTAAAGAGGTGGTTccccc                                                                          >  2:3909733/1‑150 (MQ=255)
                                                                               tGCCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCCTGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGTTCCCCcgg                                                                        <  2:4425073/150‑1 (MQ=255)
                                                                                gCCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCGTTATTTCCGGGTCCGTTATTAAAGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGGTAAAGCGTTGGGTCCCCccgc                                                                       >  1:3439425/1‑150 (MQ=255)
                                                                                    tGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCCTGGACCTTTATGAACGCCGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGTTCCCCCGGCGGTa                                                                   <  2:2346904/150‑1 (MQ=255)
                                                                                         gacgTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCGTTTTTTCCTGGACCTTTATTAAAGACCAGCAGCGCCCCCGTTTTTTCAATCCCCAGCCGTAAAGCGTTGGTTGCCCCCGCGGTAACGGt                                                              >  1:4996408/1‑150 (MQ=255)
                                                                                          acgTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCCTGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGTTCCCCCGGCGGTAACGGtt                                                             <  2:1994603/150‑1 (MQ=255)
                                                                                           cgTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCCTGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGTTCCCCCGGCGGTAACGGTTc                                                            <  2:1778205/150‑1 (MQ=255)
                                                                                                 cgcgGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTTCCTGGACCATTATTAAAGACGAGCAGCGCCGCCCTTTTTTAAAACGCCCCCGGTAAAAAGGTTGTTCCCCCCGCCGGAACCGGTAAGcccg                                                      >  1:3693279/1‑148 (MQ=255)
                                                                                                 cgcgGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCGTTATTTACCGGGCCGTTATTAAAGAAGAGCAACGCCGCCGGGTTTTGAAAAACCCGAGTTAAAACGTTGGTTACCCCCGCCGTTAACGTTCAGcccg                                                      >  1:1506053/1‑148 (MQ=255)
                                                                                                    ggTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCCTGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGTTCCCCCGGCGGTAACGGTTCAGCCGGGGt                                                   <  1:749831/150‑1 (MQ=255)
                                                                                                     gTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCGTTTTTTGCTGGACCGTTATTAACGAACAACAGCCCCCCCCGTTTTTGAAAACCCCCCCGTAAAGCGGTTGGTTCCCCCGCCGGAACCGGTTAGCCCggggc                                                   >  1:2211174/1‑149 (MQ=255)
                                                                                                      tGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTTTTGCCGTGACCATTAAGAACCACGAGCAGCGCCGCCCGTTTTTAAAAAGCCCCCCGTAAAACGTTTGGTACCCCCGCGGTAACCGTTCAGCCCGGGTcg                                                 >  2:455579/1‑150 (MQ=255)
                                                                                                      tGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTTGCTGGACCTTTATTAACGACGAGCAGCGCCGCCGGTTTTTAAAAAGCCAGCGGTAAATCGTTTGTTACCCCCGCGGTAAACGTTAATCCCGGGTcg                                                 >  1:1743868/1‑150 (MQ=255)
                                                                                                      tGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCCTGGACCTTTATTAACGACCAGCAGCGCCGCCGATTTGTCAAACGCCAGCGTTAAATCGTTGGTTACCCCGGCCGTAAACGTTCAGCCGGGGTcg                                                 >  2:3864567/1‑150 (MQ=255)
                                                                                                         aGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCGTTTTTTTCTGGGCCGTTATTTAAGACGAGCAGCGCCGCCCTTTTTTAAAACACCACCCGTAAAACGTTTGTTGACCCCGCCGGAAACGTTCAGCCCGGGgcgccc                                              >  1:1376805/1‑148 (MQ=255)
                                                                                                              gtTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCCTGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGTTCCCCCGGCGGTAACGGTTCAGCCGGGGTCGCGCCCGGa                                         <  1:1252031/150‑1 (MQ=255)
                                                                                                              gtTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCCTGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGTTCCCCCGGCGGTAACGGTTCAGCCGGGGTCGCGCCCGGa                                         <  1:1027546/150‑1 (MQ=255)
                                                                                                              gtTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCCTGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGTTCCCCCGGCGGTAACGGTTCAGCCGGGGTCGCGCCCGGa                                         <  2:4165341/150‑1 (MQ=255)
                                                                                                              gtTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCGTTATTGCCTGGCCCATTATGAACGACGCGCAGCGCCCCCCGTTTTTAAATCGCCCGCCTTAAAGCGTTTGGTACCCCCGCCGGAACGGGTCAGCCCGGGGCGCGCCCCGa                                         >  2:4857437/1‑150 (MQ=255)
                                                                                                                tAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCCTGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGTTCCCCCGGCGGTAACGGTTCAGCCGGGGTCGCGCCCGGAgc                                       <  1:4549864/150‑1 (MQ=255)
                                                                                                                tAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCCTGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGTTCCCCCGGCGGTAACGGTTCAGCCGGGGTCGCGCCCGGAgc                                       <  2:3715850/150‑1 (MQ=255)
                                                                                                                  aaaaaGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCCTGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGTTCCCCCGGCGGTAACGGTTCAGCCGGGGTCGCGCCCGGAgcag                                     <  1:979632/150‑1 (MQ=255)
                                                                                                                  aaaaaGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCCTGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGTTCCCCCGGCGGTAACGGTTCAGCCGGGGTCGCGCCCGGAgcag                                     <  1:3038575/150‑1 (MQ=255)
                                                                                                                    aaaGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCCTGGACCTTTATGAACGATGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGTTCCCCCGGCGGTAACGGTTCAGCCGGGGTCGCGCCCGGAgcaggc                                   <  2:19908/150‑1 (MQ=255)
                                                                                                                     aaGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCCTGGAACTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGTTCCCCCGGCGGTAACGGTTCAGCCGGGGTCGCGCCCGGAgcaggca                                  >  2:1637077/1‑150 (MQ=255)
                                                                                                                      agagATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCCTGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGGTAAAGCGGTGGTTCCCCCGGCGGTAACGGTTCAGCCGGGGTCGCGCCCGGAgcaggcag                                 >  2:5109042/1‑150 (MQ=255)
                                                                                                                        agagGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCCTGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGTTCCCCCGGCGGTAACGGTTCAGCCGGGGTCGCGCCCGGAGCAGgcagca                               <  1:1939237/150‑1 (MQ=255)
                                                                                                                        agaTGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCCGGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGGTGGTTCCCCCGGCGGTAACGGTTCAGCCGGGGTCGCGCCCGGCGCCGgccgca                               >  2:4577854/1‑150 (MQ=255)
                                                                                                                            ggCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCCTGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGTTCCCCCGGCGGTAACGGTTCAGCCGGGGTCGCGCCCGGAGCAGGCAGCACCTg                           <  2:1846728/150‑1 (MQ=255)
                                                                                                                              cccAGGGGCAAAAGCAGAGTCGCGTTTTTTGCGGGTCCGTTATTAACGACGAGCAGCGCCGCCGGTTTGTCAATAGCCAGCGTTAAATCGGTGGTTGCCCCCGCGGTAACGGTTCAGCCGGGGTCGCGCCCCGGGCAGGCAGCACCAGAt                         >  2:2275430/1‑150 (MQ=255)
                                                                                                                                cAGGGGCAAAAGCAGAGTCGCGTTATTGCCTGGGCCTTTATTAACGACGAGCAGCGCCGCCGTTTTGTCAAAAGCCCGCGGTAAAGCGGTGGTTCCCCCCGCGGGAACGGTTCAGCCGGGGTCGCGCCCGGAGCAGGCAGCACCTGGTaa                       >  2:259111/1‑150 (MQ=255)
                                                                                                                                 aGGGGCAAAAGCAGAGTCGCGTTATTTCCTGGACCTTTTTTAACGAAGTGCCGCGCCCCCGGTTTTTCAATCGCCCGCGGTAAAGCGTTTGTTACCCCCGCGGTAAAGGTTCAGCCGGGGGCGCGCCCGGAGCAGGCCGCACCAGATAAg                      >  2:495310/1‑150 (MQ=255)
                                                                                                                                  ggggCAAAAGCAGAGTCGCTTTATTGCCTGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGTTCCCCCGGCGGTAACGGTTCAGCCGGGGTCGCGCCCGGAGCAGGCAGCACCTGATAAGt                     <  1:2855848/150‑1 (MQ=255)
                                                                                                                                  ggggCAAAAGCAGAGTCGCGTTATTGCCTGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATAGCCAGCGTTAAAGCGTTGGTTGCCCCCGCGGTGACGGTTCAGCCGGGGTCGCGCCCGGGGCAGGCCGCCCCCGCTAAGt                     >  2:1901503/1‑150 (MQ=255)
                                                                                                                                     gCAACAGCAGAGTCGCGTTATTGCCTGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGTTCCCCCGGCGGTAACGGTTCAGCCGGGGTCGCGCCCGGAGCAGGCAGCACCTGATAAGTCTg                  <  2:4335779/150‑1 (MQ=255)
                                                                                                                                      cAAAAGCAGAGTCGCTTTATTGCCTGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGTTCCCCCGGCGGTAACGGTTCAGCCGGGGTCGCGCCCGGAGCAGGCAGCACCTGATAAGTCTGc                 <  2:1050108/150‑1 (MQ=255)
                                                                                                                                       aaaaGCAGAGTCGCTTTATTGCCTGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGTTCCCCCGGCGGTAACGGTTCAGCCGGGGTCGCGCCCGGAGCAGGCAGCACCTGATAAGTCTGCa                <  1:513313/150‑1 (MQ=255)
                                                                                                                                         aaGCAGAGTCGCTTTATTGCCAGGACCTTTATGAACCACGAGCAGCGCCCCCGTTTTGTCAATCGCCACCGTTAAAGCGTTGGGTACCCCCGCGGTAAAGGTTCATCCCGGGTCGCGCCCCGAGCAGGCACCACCAGATAAGTCTGCAca              >  2:3723700/1‑149 (MQ=255)
                                                                                                                                                  cGCTTTATTGCCTGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGTTCCCCCGGCGGTAACGGTTCAGCCGGGGTCGCGCCCGGAGCAGGCAGCACCTGATAAGTCTGCACTGGCGCGCGa     >  1:4848601/1‑150 (MQ=255)
                                                                                                                                                  cGCTTTATTGCCTGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGTTCCCCCGGCGGTAACGGTTCAGCCGGGGTCGCGCCCGGAGCAGGCAGCACCTGATAAGTCTGCACTGGCGCGCGa     >  2:944329/1‑150 (MQ=255)
                                                                                                                                                    cTTTATTGCCTGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGTTCCCCCGGCGGTAACGGTTCAGCCGGGGTCGCGCCCGGAGCAGGCAGCACCTGATAAGTCTGCACTGGCGCGCGAAc   >  2:3547125/1‑150 (MQ=255)
                                                                                                                                                    cTTTATTGCCTGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGTTCCCCCGGCGGTAACGGTTCAGCCGGGGTCGCGCCCGGAGCAGGCAGCACCTGATAAGTCTGCACTGGCGCGCGAAc   >  1:4566489/1‑150 (MQ=255)
                                                                                                                                                      |                                                                                                                                                         
AGAGCAAAGGCTTCGCGAAGCAGGTGATGTGGTTTACATCACTGGTATCTCGTGGTGAAAACTTACCGCCGTTGTATCGTGCCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCCTGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGTTCCCCCGGCGGTAACGGTTCAGCCGGGGTCGCGCCCGGAGCAGGCAGCACCTGATAAGTCTGCACTGGCGCGCGAACG  >  CP009273/838503‑838801

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: