| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,348,772 | G→T | 100% | P2T (CCT→ACT) A319D (GCC→GAC) |
sapC ← sapB ← |
antimicrobial peptide transport ABC transporter permease antimicrobial peptide transport ABC transporter permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,348,772 | 0 | G | T | 97.0% | 1006.9 / 16.5 | 319 | P2T (CCT→ACT) A319D (GCC→GAC) | sapC sapB | antimicrobial peptide transport ABC transporter permease antimicrobial peptide transport ABC transporter permease |
| Reads supporting (aligned to +/- strand): ref base G (2/8); new base T (124/185); total (126/193) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.26e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 319 total aligned reads displayed.
GCGCAAACCAGCCGCCAAAAATACACAGTACAGCCAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAATCCTGCTGGCGGATGGCGTTAATTAACCAG > CP009273/1348625‑1348918 | gcAAACCAGCCGCCAAAAATACACAGTACAGCCAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATa < 2:224380/150‑1 (MQ=255) aaaCCAGCCGCCAAAAATACACAGTACAGCCAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATAcc > 2:660771/1‑150 (MQ=255) aCCAGCCGCCAAAAATACACAGTACAGCCAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCAt < 1:4861614/150‑1 (MQ=255) ccgccAAAAATACACAGTACAGCCAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCtt < 2:1603668/150‑1 (MQ=255) cgccAAAAATACACAGTACAGCCAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTa > 1:4708292/1‑150 (MQ=255) cgccAAAAATACACAGTACAGCCAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTa < 1:722533/150‑1 (MQ=255) cgccAAAAATACACAGTACAGCCAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTa < 2:4585319/150‑1 (MQ=255) gccAAAAATACACAGTACAGCCAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTAt < 2:841513/150‑1 (MQ=255) cAAAAATACACAGTACAGCCAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGt > 1:3153411/1‑150 (MQ=255) aaaaaTACACAGTACAGCCAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGtt < 2:1540575/150‑1 (MQ=255) aaaaTACACAGTACAGCCAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGttt < 2:289387/150‑1 (MQ=255) aaaTACACAGTACAGCCAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTc > 1:2664088/1‑150 (MQ=255) aTACACAGTACAGCCAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCag < 2:4463848/150‑1 (MQ=255) acaGTACAGCCAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCagagtg < 1:4218311/150‑3 (MQ=255) aGTACAGCCAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGtt < 1:1445577/150‑1 (MQ=255) aGTACAGCCAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGtt > 1:2507421/1‑150 (MQ=255) gTACAGCCAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTa < 1:4185078/150‑1 (MQ=255) tACAGCCAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAg > 2:1567034/1‑150 (MQ=255) tACAGCCAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCGATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAg > 1:1856346/1‑150 (MQ=255) agccagccCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCa > 2:3323382/1‑150 (MQ=255) agccagccCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCa > 2:2466613/1‑150 (MQ=255) gccagccCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCAt < 1:1935920/150‑1 (MQ=255) cagccCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATgg > 2:1469004/1‑150 (MQ=255) cagccCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATgg < 1:3623821/150‑1 (MQ=255) cagccCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATgg < 1:199845/150‑1 (MQ=255) agccCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGc > 1:976241/1‑150 (MQ=255) cccGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCAcc > 2:3266455/1‑150 (MQ=255) cccGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCAcc > 1:3253593/1‑150 (MQ=255) gcgcAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCaa > 2:717944/1‑150 (MQ=255) cgcAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCaaa > 1:3341689/1‑150 (MQ=255) cAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAat > 2:2585916/1‑150 (MQ=255) aGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAata > 1:480183/1‑150 (MQ=255) gCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAatat < 2:4400946/150‑1 (MQ=255) cGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCa > 2:4500776/1‑150 (MQ=255) tACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCATAGGGTTAGCCATGGCACCCAAAATATCAGa > 1:1523911/1‑150 (MQ=255) tACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGa < 1:5085543/150‑1 (MQ=255) cAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGaaa > 1:1560682/1‑150 (MQ=255) cAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGaaa > 2:4103631/1‑150 (MQ=255) cAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGaaa < 1:1725892/150‑1 (MQ=255) ccGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCAc < 1:3964147/150‑1 (MQ=255) cGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACg < 1:1187846/150‑1 (MQ=255) aCCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGGCATGGCACCCAAAATATCAGAAATCACGtt < 2:1645174/150‑1 (MQ=255) aCCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGtt < 2:935192/150‑1 (MQ=255) ccATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTa < 1:1659342/150‑1 (MQ=255) ccATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGACATGGCACCCAAAATATCAGAAATCACGTTa < 2:3985021/150‑1 (MQ=255) cATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTaa < 2:4904953/150‑1 (MQ=255) aTCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAAc < 2:1286023/150‑1 (MQ=255) tCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACa > 1:79301/1‑150 (MQ=255) gCAGAGGCTTCAATATAAAATTTGCGCCATGAGGTACGCAGAGTGCCCGGCGGTCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCAACCAAAATATCAGAAATCACGTTAACaat < 1:2539230/150‑1 (MQ=255) agagGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACaataa < 2:4700488/150‑1 (MQ=255) agGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATg > 1:3580727/1‑150 (MQ=255) gTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCa > 2:691768/1‑150 (MQ=255) gTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCa < 1:1213604/150‑1 (MQ=255) tCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAg < 1:4486192/150‑1 (MQ=255) tCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAg < 2:90188/150‑1 (MQ=255) cACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGt < 1:1619389/150‑1 (MQ=255) aCTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTg > 1:406909/1‑150 (MQ=255) cTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGa < 1:1259108/150‑1 (MQ=255) tataAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAg < 1:3814932/150‑1 (MQ=255) tataAAATATGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCAATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATAACGTTAACAATAATGACCAGTGAg > 1:5162212/1‑150 (MQ=255) taAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGcc > 1:4595393/1‑150 (MQ=255) aaaaTTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCca < 2:3594646/150‑1 (MQ=255) aaaaTTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCca < 2:303825/150‑1 (MQ=255) aaTTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCcaca < 2:3756504/150‑1 (MQ=255) cggcAGGCGGTACGCAGCGTGCGCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACAATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCAt < 2:2653518/147‑1 (MQ=255) cAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCAc > 2:750956/1‑150 (MQ=255) gCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTcc < 1:2265542/150‑1 (MQ=255) ggTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCcgg > 2:4264251/1‑150 (MQ=255) cGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGa < 1:33663/150‑1 (MQ=255) gCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGaa < 1:558948/150‑1 (MQ=255) gCAGCGTGCCCGGAGGTCGCTTTTAGCTGTATACTCTATCGTAATTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGTAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGaa < 2:1195651/150‑1 (MQ=255) cAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCGTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGaaa < 1:1910475/150‑1 (MQ=255) gTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGc < 1:2179787/150‑1 (MQ=255) tGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCt < 2:2802369/150‑1 (MQ=255) tGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCt < 1:3219750/150‑1 (MQ=255) tGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCt < 2:516624/150‑1 (MQ=255) cgggcgCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAAt > 1:3723646/1‑150 (MQ=255) cgggcgCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAAt > 1:436307/1‑150 (MQ=255) cgggcgCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACACCGGCGGAAATGGCTGCGTAAt > 1:1350386/1‑150 (MQ=255) gggcgCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAATc < 1:2873180/150‑1 (MQ=255) gggcgCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAATc > 1:1146709/1‑150 (MQ=255) ggcgCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAATcc < 1:660747/150‑1 (MQ=255) ggcgCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAAGAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAATcc < 1:3128431/150‑1 (MQ=255) cgcTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAATCctg > 2:4879435/1‑150 (MQ=255) gcTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAATCctgc < 1:5136596/150‑1 (MQ=255) cTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAATCctgct < 2:254386/150‑1 (MQ=255) cTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAATCctgct > 1:398930/1‑150 (MQ=255) ttttCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAATCctgctg > 2:1121748/1‑150 (MQ=255) ttttCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAATCctgctg > 2:1393613/1‑150 (MQ=255) ttttCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAATCctgctg < 2:4797138/150‑1 (MQ=255) ttCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAATCCTGCTGGc < 1:2596453/150‑1 (MQ=255) ttCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAATCCTGCTGGc < 2:3783804/150‑1 (MQ=255) ttCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAATCCTGCTGGc > 1:893502/1‑150 (MQ=255) cTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAATCCTGCTGGCGGAt > 2:4738265/1‑150 (MQ=255) tataCGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAATCCTGCTGGCGGATGGc < 2:2954746/150‑1 (MQ=255) tataCGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAATCCTGCTGGCGGATGGc > 2:2379503/1‑150 (MQ=255) tataCGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAATCCTGCTGGCGGATGGc > 1:4123678/1‑150 (MQ=255) tataCGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAATCCTGCTGGCGGATGGc > 1:1002434/1‑150 (MQ=255) aaGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAATCCTGCTGGCGGATGGCGTTAATTAACCAg > 2:585473/1‑150 (MQ=255) aaGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAATCCTGCTGGCGGATGGCGTTAATTAACCAg < 2:1916781/150‑1 (MQ=255) | GCGCAAACCAGCCGCCAAAAATACACAGTACAGCCAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAATCCTGCTGGCGGATGGCGTTAATTAACCAG > CP009273/1348625‑1348918 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |