| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,558,685 | G→T | 100% | R436S (CGC→AGC) | dosP ← | oxygen sensor, c‑di‑GMP phosphodiesterase, heme‑regulated; cold‑ and stationary phase‑induced bioflim regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,558,685 | 0 | G | T | 100.0% | 946.4 / ‑6.7 | 281 | R436S (CGC→AGC) | dosP | oxygen sensor, c‑di‑GMP phosphodiesterase, heme‑regulated; cold‑ and stationary phase‑induced bioflim regulator |
| Reads supporting (aligned to +/- strand): ref base G (0/1); new base T (151/129); total (151/130) | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 281 total aligned reads displayed.
CAATCATTATCGGCTTGCTGACCACATTCCGTAGCTCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCGATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTGTCGACCAGGTCATCGAGGTAATTGTGCAGGTTATTGC > CP009273/1558538‑1558831 | cAATCATTATCGGCTTGCTGACCACATTCCGTAGCTCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTAt < 2:3192286/150‑1 (MQ=255) tCATTATCGGCTTGCTGACCACATTCCGTAGCTCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGa > 1:1449021/1‑150 (MQ=255) tCATTATCGGCTTGCTGACCACATTCCGTAGCTCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGa < 2:174558/150‑1 (MQ=255) ttATCGGCTTGCTGACCACATTCCGTAGCTCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCa < 2:2017116/150‑1 (MQ=255) cGGCTTGCTGACCACATTCCGTAGCTCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTc > 2:3131459/1‑150 (MQ=255) ggCTTGCTGACCACATTCCGTAGCTCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTcc < 2:3613705/150‑1 (MQ=255) gCTTGCTGACCACATTCCGTAGCTCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCa < 2:6566/150‑1 (MQ=255) cTTGCTGACCACATTCCGTAGCTCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAg > 2:4982043/1‑150 (MQ=255) ttGCTGACCACATTCCGTAGCTCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGc > 2:78283/1‑150 (MQ=255) tGCTGACCACATTCCGTAGCTCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCa > 2:4038851/1‑150 (MQ=255) cTGACCACATTCCGTAGCTCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAAt < 2:1220541/150‑1 (MQ=255) ccACATTCCGTAGCTCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCCCTTCCAGCAATGCCt > 2:2805429/1‑150 (MQ=255) ccACATTCCGTAGCTCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCt < 1:476071/150‑1 (MQ=255) cacaTTCCGTAGCTCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTg < 1:5087207/150‑1 (MQ=255) caTTCCGTAGCTCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGAt < 1:836778/150‑1 (MQ=255) ccGTAGCTCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGc > 1:2959117/1‑150 (MQ=255) cGTAGCTCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGcc > 1:3229777/1‑150 (MQ=255) cTCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGc > 1:4361970/1‑150 (MQ=255) tCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCa < 2:3727876/150‑1 (MQ=255) tCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCa > 2:4667915/1‑150 (MQ=255) tCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAg > 2:743360/1‑150 (MQ=255) cGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGc < 1:2836290/150‑1 (MQ=255) ggCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGcc > 2:4358084/1‑150 (MQ=255) gCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCa < 1:2065350/150‑1 (MQ=255) gATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAg < 2:2934906/150‑1 (MQ=255) ttGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCt < 2:1605557/150‑1 (MQ=255) tGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTa < 1:1021753/150‑1 (MQ=255) gggTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTat > 1:4500279/1‑150 (MQ=255) ggTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTatc < 2:1480074/150‑1 (MQ=255) aaTGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTatcaat < 2:3312652/150‑1 (MQ=255) aaTGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTatcaat < 2:2754733/150‑1 (MQ=255) aCTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATc > 1:1378225/1‑150 (MQ=255) aCTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATc > 1:3949005/1‑150 (MQ=255) aCGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACTACAGAGATACTGATCCGTTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCAGATCGGCCCACGCAAAGCCAAGGCTATCAATCACATCATGa > 2:328150/1‑150 (MQ=255) gtcgtTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAat < 2:179190/150‑1 (MQ=255) gtcgtTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAat > 1:1763852/1‑150 (MQ=255) gtcgtTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAat > 1:2888642/1‑150 (MQ=255) gtcgtTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAat < 1:4739015/150‑1 (MQ=255) cgtTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAatat > 1:1277890/1‑150 (MQ=255) gtTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATg < 1:575967/150‑1 (MQ=255) gtTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATg < 2:156567/150‑1 (MQ=255) gtTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATg < 1:3783777/150‑1 (MQ=255) gAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAac > 1:4293314/1‑150 (MQ=255) gAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAac > 1:4587247/1‑150 (MQ=255) gCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACAcc > 1:1611298/1‑150 (MQ=255) cTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCg < 1:3663992/150‑1 (MQ=255) cTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCg < 1:4629964/150‑1 (MQ=255) cTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCg > 2:4320762/1‑150 (MQ=255) cACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGAt < 1:1169451/150‑1 (MQ=255) gAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATgag > 2:4200557/1‑150 (MQ=255) gAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATgag > 2:534744/1‑150 (MQ=255) aGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATgaga > 1:3635403/1‑150 (MQ=255) aGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATgaga > 2:3081990/1‑150 (MQ=255) aCAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCACTGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATac > 1:971080/1‑150 (MQ=255) aCAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATac > 1:3512224/1‑150 (MQ=255) aaaCTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATacac < 1:1676641/150‑1 (MQ=255) cTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATAcaccac < 2:487418/150‑1 (MQ=255) cTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATAcaccac < 1:670194/150‑1 (MQ=255) cGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACggg < 1:3293765/150‑1 (MQ=255) gTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGga < 1:4873410/150‑1 (MQ=255) tACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGgag > 2:4499613/1‑150 (MQ=255) aCCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGgaga > 1:3067720/1‑150 (MQ=255) aCCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGgaga < 1:4902517/150‑1 (MQ=255) ccTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGgagag < 1:935897/150‑1 (MQ=255) cTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGgagaga > 2:4792831/1‑150 (MQ=255) gATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGc > 1:4986096/1‑150 (MQ=255) aTACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCt > 1:3862650/1‑150 (MQ=255) tACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCtt > 2:4567104/1‑150 (MQ=255) aCGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCttt < 2:2854201/150‑1 (MQ=255) cGACAGAGATACTGATCCGGTTTTAGTTTTTCACGAAATCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTg > 1:4068892/1‑150 (MQ=255) cGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTg > 2:2505154/1‑150 (MQ=255) gACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTGt > 1:2670545/1‑150 (MQ=255) gACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTGt > 2:1886114/1‑150 (MQ=255) gaTACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTGTCGACCa > 2:891895/1‑150 (MQ=255) gaTACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTGTCGACCa < 2:4463741/150‑1 (MQ=255) gaTACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTGTCGACCa > 1:3347396/1‑150 (MQ=255) aCTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTGTCGACCAGGt > 2:3452837/1‑150 (MQ=255) cTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTGTCGACCAGGTc > 2:3587363/1‑150 (MQ=255) cTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAAGGCCTGATCGGCCCACGCAGCGCCCAGGCTATCAATCACATCCTGCATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTGTCGACCTGGTc < 1:1235707/150‑1 (MQ=255) tGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTGTCGACCAGGTCa > 2:19923/1‑150 (MQ=255) gATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTGTCGACCAGGTCAt < 2:120294/150‑1 (MQ=255) gATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTGTCGACCAGGTCAt > 1:301810/1‑150 (MQ=255) tCCGTTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTTAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTGTCGACCAGGTCATCg < 1:4192275/150‑1 (MQ=255) tCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTGTCGACCAGGTCATCg > 1:2271319/1‑150 (MQ=255) tttGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTGTCGACCAGGTCATCGAGGTa > 1:2508953/1‑150 (MQ=255) tGAGTTTTTCACGAAAGCTATTGACCACTACCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTGTCGACCAGGTCATCGAGGTAAt < 2:3025890/150‑1 (MQ=255) tGAGTTTTTCACGAAAGCTATTGACCACTACCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTGTCGACCAGGTCATCGAGGTAAt < 2:2336259/150‑1 (MQ=255) gAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTGTCGACCAGGTCATCGAGGTAAtt > 2:383801/1‑150 (MQ=255) gAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTGTCGACCAGGTCATCGAGGTAAtt < 1:467603/150‑1 (MQ=255) gAGTTTTTCACGAAAGCGATTGACCACTTCCAGCAAGGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTGTCGACCAGGTCATCGAGGTAAtt < 1:2623515/150‑1 (MQ=255) aGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTGTCGACCAGGTCATCGAGGTAATtg < 1:4716689/150‑1 (MQ=255) aGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTGTCGACCAGGTCATCGAGGTAATtg > 2:1070253/1‑150 (MQ=255) aGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTGTCGACCAGGTCATCGAGGTAATtg < 1:1995170/150‑1 (MQ=255) tCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTGTCGACCAGGTCATCGAGGTAATTGTGCAgg > 2:2533472/1‑150 (MQ=255) tCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTGTCGACCAGGTCATCGAGGTAATTGTGCAgg > 1:1648300/1‑150 (MQ=255) tCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTGTCGACCAGGTCATCGAGGTAATTGTGCAgg > 2:596417/1‑150 (MQ=255) tCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTGTCGACCAGGTCATCGAGGTAATTGTGCAgg < 1:603924/150‑1 (MQ=255) cGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTGTCGACCAGGTCATCGAGGTAATTGTGCAGGTTa > 1:2717479/1‑150 (MQ=255) gAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTGTCGACCAGGTCATCGAGGTAATTGTGCAGGTTAt > 2:4100613/1‑150 (MQ=255) aaGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTGTCGACCAGGTCATCGAGGTAATAGTGCAGGTTAGTg > 2:2637590/1‑150 (MQ=255) | CAATCATTATCGGCTTGCTGACCACATTCCGTAGCTCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCGATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTGTCGACCAGGTCATCGAGGTAATTGTGCAGGTTATTGC > CP009273/1558538‑1558831 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |