| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,669,413 | G→T | 12.0% | P402Q (CCG→CAG) | pntB ← | pyridine nucleotide transhydrogenase, beta subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,669,413 | 0 | G | T | 12.0% | 974.0 / 69.9 | 305 | P402Q (CCG→CAG) | pntB | pyridine nucleotide transhydrogenase, beta subunit |
| Reads supporting (aligned to +/- strand): ref base G (160/108); new base T (22/15); total (182/123) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 308 total aligned reads displayed.
TGGCGTCACCAAACAGCATGTGGGTGTTTTCCTTGAAGAACAGCGGGTTTTGCACACCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCAGCACGATGTCATACGGTACTTTTGCTTCAGCCAGCAATACGTTCATATGTCCA > CP009273/1669264‑1669562 | tGGCGTCACCAAACAGCATGTGGGTGTTTTCCTTGAAGAACAGCGGGTTTTGCACACCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCg > 1:5015528/1‑150 (MQ=255) gCGTCACCAAACAGCATGTGGGTGTTTTCCTTGAAGAACAGCGGGTTTTGCACACCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGa > 1:4150002/1‑150 (MQ=255) cGTCACCAAACAGCATGTGGGTGTTTTCCTTGAAGAACAGCGGGTTTTGCACACCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACCATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGat < 2:3296041/150‑1 (MQ=255) tCACCAAACAGCATGTGGGTGTTTTCCTTGAAGAACAGCGGGTTTTGCACACCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGatca > 1:1020913/1‑150 (MQ=255) aCCAAACAGCATGTGGGTGTTTTCCTTGAAGAACAGCGGGTTTTGCACACCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGatcatc > 1:1329444/1‑150 (MQ=255) ccAAACAGCATGTGGGTGTTTTCCTTGAAGAACAGCGGGTTTTGCACACCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATcc > 2:1308822/1‑150 (MQ=255) gCATGTGGGTGTTTTCCTTGAAGAACAGCGGGTTTTGCACACCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGcgccg > 1:4853569/1‑150 (MQ=255) cATGTGGGTGTTTTCCTTGAAGAACAGCGGGTTTTGCACACCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGcgccgc > 1:149138/1‑150 (MQ=255) aTGTGGGTGTTTTCCTTGAAGAACAGCGGGTTTTGCACACCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCgccgcc < 2:89564/150‑1 (MQ=255) gtgGGTGTTTTCCTTGAAGAACAGCGGGTTTTGCACACCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCgg < 1:3760747/150‑1 (MQ=255) tgGGTGTTTTCCTTGAAGAACAGCGGGTTTTGCACACCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCggg < 2:1813582/150‑1 (MQ=255) gtgtTTTCCTTGAAGAACAGCGGGTTTTGCACACCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTa > 1:2832497/1‑150 (MQ=255) tttCCTTGAAGAACAGCGGGTTTTGCACACCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCg > 1:2906975/1‑150 (MQ=255) ttCCTTGAAGAACAGCGGGTTTTGCACACCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGt < 1:4770549/150‑1 (MQ=255) tCCTTGAAGAACAGCGGGTTTTGCACACCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTa > 1:4335283/1‑150 (MQ=255) ccTTGAAGAACAGCGGGTTTTGCACACCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTAt > 1:4983639/1‑150 (MQ=255) ccTTGAAGAACAGCGGGTTTTGCACACCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTAt > 1:4031856/1‑150 (MQ=255) ccTTGAAGAACAGCGGGTTTTGCACACCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTAt > 1:2423607/1‑150 (MQ=255) cTTGAAGAACAGCGGGTTTTGCACACCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATc > 2:141359/1‑150 (MQ=255) cTTGAAGAACAGCGGGTTTTGCACACCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATc > 2:2737035/1‑150 (MQ=255) aagaaCAGCGGGTTTTGCACACCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTa > 2:4319154/1‑150 (MQ=255) aagaaCAGCGGGTTTTGCACACCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTa < 1:4743824/150‑1 (MQ=255) aagaaCAGCGGGTTTTGCACACCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGGATCGTTa > 2:834130/1‑150 (MQ=255) agaaCAGCGGGTTTTGCACACCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAg > 2:78578/1‑150 (MQ=255) aaCAGCGGGTTTTGCACACCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCa < 1:3421049/150‑1 (MQ=255) aCAGCGGGTTTTGCACACCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCTGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCAc > 1:744631/1‑150 (MQ=255) cAGCGGGTTTTGCACACCAGAATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCAACCTGCGACGCCGGGTTAACCGTATCGTTAGCAcc > 1:1686572/1‑150 (MQ=255) aGCGGGTTTTGCACACCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCTGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCa > 2:138121/1‑150 (MQ=255) gCGGGTTTTGCACACCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCTGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCaa < 2:1720477/150‑1 (MQ=255) gggTTTTGCACACCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATc > 1:2496707/1‑150 (MQ=255) gTTTTGCACACCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCAc < 1:4829049/150‑1 (MQ=255) gTTTTGCACACCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCAc < 1:2846630/150‑1 (MQ=255) gTTTTGCACACCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCAc < 1:581345/150‑1 (MQ=255) ttttGCACACCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCAcc > 2:1954291/1‑150 (MQ=255) tttGCACACCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCTGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCa > 1:4901545/1‑150 (MQ=255) tttGCACACCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCa < 1:237325/150‑1 (MQ=255) gCACACCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTa < 2:3750438/150‑1 (MQ=255) cacaCCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCTGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTAc > 2:381923/1‑150 (MQ=255) cacCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTAcgg < 1:1531025/150‑1 (MQ=255) acCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTAcggt > 2:4637483/1‑150 (MQ=255) cAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTTcggtat < 1:5140080/150‑1 (MQ=255) cAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTAcggtat < 2:1508943/150‑1 (MQ=255) aGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCTGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTAcggtatc < 1:1463212/150‑1 (MQ=255) cATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTAcggtatcgg > 1:179595/1‑150 (MQ=255) aGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTAcggtatcggtat > 2:4899670/1‑150 (MQ=255) ccAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCa < 2:2915800/150‑1 (MQ=255) cAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAg < 1:4491984/150‑1 (MQ=255) aGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTCTCGGTATCAGc > 2:3384454/1‑150 (MQ=255) tgtTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCaa > 1:3888870/1‑150 (MQ=255) tgtTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCaa > 2:555659/1‑150 (MQ=255) tCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGt < 1:5161586/150‑1 (MQ=255) tCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGt > 2:353896/1‑150 (MQ=255) cATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGtc > 2:114277/1‑150 (MQ=255) aTCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGtca < 2:2089220/150‑1 (MQ=255) aTCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGtca < 2:2317694/150‑1 (MQ=255) aTCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGtca > 1:1005149/1‑150 (MQ=255) tCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCTGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGtcat < 1:4076847/150‑1 (MQ=255) taaCGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGtcatca > 2:506214/2‑150 (MQ=255) aCGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCAtt < 2:4447715/150‑1 (MQ=255) cGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTg < 1:992463/150‑1 (MQ=255) cGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTg > 2:2376912/1‑150 (MQ=255) gTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGa > 2:3992835/1‑150 (MQ=255) tAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCTGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGAtct > 2:3634254/1‑150 (MQ=255) tAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGAtct < 2:511905/150‑1 (MQ=255) aaaGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGAtctc > 1:1423158/1‑150 (MQ=255) cGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCa < 1:3519158/150‑1 (MQ=255) cGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCa < 1:636315/150‑1 (MQ=255) gTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCAg < 1:2864008/150‑1 (MQ=255) gTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCAg > 1:1759425/1‑150 (MQ=255) ttCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCAGc < 1:3125781/150‑1 (MQ=255) tCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCAGCa < 1:4112860/150‑1 (MQ=255) ttCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCAGCACGATGTCa < 2:2516304/150‑1 (MQ=255) tCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCAGCACGATGTCAt > 2:2637233/1‑150 (MQ=255) ccACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCAGCACGATGTCATa > 1:4384478/1‑150 (MQ=255) ccACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCAGCACGATGTCATa < 1:2241842/150‑1 (MQ=255) cTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCAGCACGATGTCATACGGTa > 1:1385114/1‑150 (MQ=255) tCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCAGCACGATGTCATACGGTACt > 1:1640240/1‑150 (MQ=255) ccAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCAGCACGATGTCATACGGTACtt < 2:1006174/150‑1 (MQ=255) cAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCAGCACGATGTCATACGGTACttt > 2:60722/1‑150 (MQ=255) cacaGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCAGCACGATGTCCTACGGTACTTTTGc > 2:467152/1‑150 (MQ=255) caGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCAGCACGATGTCATACGGTACTTTTGCtt < 2:1218727/150‑1 (MQ=255) caGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCAGCACGATGTCATACGGTACTTTTGCtt < 2:3180608/150‑1 (MQ=255) caGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCAGCACGATGTCATACGGTACTTTTGCtt > 2:3142448/1‑150 (MQ=255) ggCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCAGCACGATGTCATACGGTACTTTTGCTTca < 2:4066140/150‑1 (MQ=255) gCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCAGCACGATGTCATACGGTACTTTTGCTTcag < 2:4894682/150‑1 (MQ=255) cAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCAGCACGATGTCATACGGTACTTTTGCTTCAGCCAGCa < 2:727758/150‑1 (MQ=255) cAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCAGCACGATGTCATACGGTACTTTTGCTTCAGCCAGCa < 1:852116/150‑1 (MQ=255) aGCAATCGGACTCTTCGGAACATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCAGCACGATGTCATACGGTACTTTTGCTTCAGCCAGCaa < 1:1102150/150‑1 (MQ=255) aaTCGGACTCTTCTGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCAGCACGATGTCATACGGTACTTTTGCTTCAGCCAGCAATAc < 2:749046/150‑1 (MQ=255) aaTCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCAGCACGATGTCATACGGTACTTTTGCTTCAGCCAGCAATAc > 2:2262916/1‑150 (MQ=255) aaTCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCAGCACGATGTCATACGGTACTTTTGCTTCAGCCAGCAATAc > 1:3931726/1‑150 (MQ=255) aaTCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCAGCACGATGTCATACGGTACTTTTGCTTCAGCCAGCAATAc > 2:107956/1‑150 (MQ=255) aTCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCAGCACGATGTCATACGGTACTTTTGCTTCAGCCAGCAATACg > 1:3319444/1‑150 (MQ=255) cGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCAGCACGATGTCATACGGTACTTTTGCTTCAGCCAGCAATACGtt > 1:4547865/1‑150 (MQ=255) ctctTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCAGCACGATGTCATACGGTACTTTTGCTTCAGCCAGCAATACGTTCata > 1:2183918/1‑150 (MQ=255) ttCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCAGCACGATGTCATACGGTACTTTTGCTTCAGCCAGCAATACGTTCATATGt < 1:78578/150‑1 (MQ=255) tCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCAGCACGATGTCATACGGTACTTTTGCTTCAGCCAGCAATACGTTCATATGTc > 1:4282012/1‑150 (MQ=255) tCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCAGCACGATGTCATACGGTACTTTTGCTTCAGCCAGCAATACGTTCATATGTc > 1:2995742/1‑150 (MQ=255) cGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCAGCACGATGTCATACGGTACTTTTGCTTCAGCCAGCAATACGTTCATATGTcc < 2:2832497/150‑1 (MQ=255) cGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCAGCACGATGTCATACGGTACTTTTGCTTCAGCCAGCAATACGTTCATATGTcc > 1:1889132/1‑150 (MQ=255) | TGGCGTCACCAAACAGCATGTGGGTGTTTTCCTTGAAGAACAGCGGGTTTTGCACACCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCAGCACGATGTCATACGGTACTTTTGCTTCAGCCAGCAATACGTTCATATGTCCA > CP009273/1669264‑1669562 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |