Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | CP009273 | 1,885,611 | G→T | 100% | R628S (CGT→AGT) | yoaA ← | putative ATP‑dependent helicase, DinG family |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | CP009273 | 1,885,611 | 0 | G | T | 96.1% | 850.2 / 19.7 | 282 | R628S (CGT→AGT) | yoaA | putative ATP‑dependent helicase, DinG family |
Reads supporting (aligned to +/- strand): ref base G (5/6); new base T (171/99); total (177/105) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 3.40e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.71e-01 | |||||||||||
Rejected as polymorphism: Frequency below/above cutoff threshold. |
Only 100 of 282 total aligned reads displayed.
CGTCGTTCCACAGGGCGACAGAGCAGGCCTCTGTCGCGGTATCGATAGCCAGAATTCGCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACGAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATCACCAGCACGCCACGATCGTCGGCGTCGCGAATCAGTCGCCCTACCCCCT > CP009273/1885464‑1885757 | cgtTCCACAGGGCGACAGAGCAGGCCTCTGTCGCGGTATCGATAGCCAGAATTCGCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCg > 1:1004166/1‑150 (MQ=255) gtTCCACAGGGCGACAGAGCAGGCCTCTGTCGCGGTATCGATAGCCAGAATTCGCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGc > 2:3876195/1‑150 (MQ=255) ttCCACAGGGCGACAGAGCAGGCCTCTGTCGCGGTATCGATAGCCAGAATTCGCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCa > 1:1917662/1‑150 (MQ=255) ttCCACAGGGCGACAGAGCAGGCCTCTGTCGCGGTATCGATAGCCAGAATTCGCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCa < 1:220133/150‑1 (MQ=255) tCCACAGGGCGACAGAGCAGGCCTCTGTCGCGGTATCGATAGCCAGAATTCGCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCAc > 2:52018/1‑150 (MQ=255) cacaGGGCGACAGAGCAGGCCTCTGTCGCGGTATCGATAGCCAGAATTCGCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACgg > 2:3310427/1‑150 (MQ=255) cacaGGGCGACAGAGCAGGCCTCTGTCGCGGTATCGATAGCCAGAATTCGCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACgg < 2:3563866/150‑1 (MQ=255) acaGGGCGACAGAGCAGGCCTCTGTCGCGGTATCGATAGCCAGAATTCGCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACggg < 2:280094/150‑1 (MQ=255) caGGGCGACAGAGCAGGCCTCTGTCGCGGTATCGATAGCCAGAATTCGCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGc > 1:1070879/1‑150 (MQ=255) caGGGCGACAGAGCAGGCCTCTGTCGCGGTATCGATAGCCAGAATTCGCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGc < 2:1885079/150‑1 (MQ=255) gCAGGCCTCTGTCGCGGTATCGATAGCCAGAATTCGCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGt < 1:3743523/150‑1 (MQ=255) aGGCCTCTGTCGCGGTATCGATAGCCAGAATTCGCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGc > 1:2335255/1‑150 (MQ=255) aGGCCTCTGTCGCGGTATCGATAGCCAGAATTCGCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGc > 1:3086130/1‑150 (MQ=255) aGGCCTCTGTCGCGGTATCGATAGCCAGAATTCGCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCAAACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGACACTAACCTCACGGGCAATGTCACGGGTGc > 1:2808810/1‑150 (MQ=255) ggCCTCTGTCGCGGTATCGATAGCCAGAATTCGCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACGAACCGCACGGGCAATGTCACGGGTGCg > 2:3131747/1‑150 (MQ=255) tctGTCGCGGTATCGATAGCCAGAATTCGCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGgc < 1:5114011/150‑1 (MQ=255) tGTCGCGGTATCGATAGCCAGAATTCGCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACGAACCGCACGGGCAATGTCACGGGTGCGTGgcgc > 1:2362254/1‑150 (MQ=255) gTCGCGGTATCGATAGCCAGAATTCGCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGcgcg > 2:1441653/1‑150 (MQ=255) gTCGCGGTATCGATAGCCAGAATTCGCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCAGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGcgcg < 2:1078232/150‑1 (MQ=255) cgGTATCGATAGCCAGAATTCGCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCgcgggcg < 2:2942867/150‑1 (MQ=255) ggTATCGATAGCCAGAATTCGCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCgcgggcgg > 2:119715/1‑150 (MQ=255) aTCGATAGCCAGAATTCGCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAg < 1:4412871/150‑1 (MQ=255) aTCGATAGCCAGAATTCGCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAg > 1:3971933/1‑150 (MQ=255) aTCGAGAGCCAGAATTCGCATGGGTCTTCGTGCTGAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAg < 1:3524918/150‑1 (MQ=255) cGATAGCCAGAATTCGCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGAc > 2:3165592/1‑150 (MQ=255) tAGCCAGAATTCGCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTgg < 1:619872/150‑1 (MQ=255) aGCCAGAATTCGCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGc > 1:2621128/1‑150 (MQ=255) ccAGAATTCGCATGGGTCTTCGTGCTTAGATCTATAAAAAGGCGCGCATATTACCTTTCTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCga < 1:3888679/150‑1 (MQ=255) ccAGAATTCGCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCACTGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCga > 2:2459432/1‑150 (MQ=255) ccAGAAGTCGCATGGGTCTTCGTGCTTAGATCAATACAAAGGCGCGCATCATACCATACTCCGTAACAAAGTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCga < 1:174272/150‑1 (MQ=255) aGAATTCGCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATAATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCgaga < 1:5046886/150‑1 (MQ=255) aaTTCGCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGaaa < 2:4524179/150‑1 (MQ=255) aTTCGCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAAc < 1:640914/150‑1 (MQ=255) aTTCGCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAAGTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAAc < 1:4932231/150‑1 (MQ=255) tCGCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGt > 1:4138329/1‑150 (MQ=255) cATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTcgc < 2:739313/150‑1 (MQ=255) aTGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTcgcg > 1:1218352/1‑150 (MQ=255) gggTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGcc < 1:2342483/150‑1 (MQ=255) gggTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGcc < 1:2892059/150‑1 (MQ=255) tCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTa > 1:2992816/1‑150 (MQ=255) cTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTaa < 2:1729089/150‑1 (MQ=255) ttCGTGCTTAGATCAATAAAAAGGCGCTCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAg < 1:972785/150‑1 (MQ=255) ttCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAg < 2:181378/150‑1 (MQ=255) cGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGa > 2:4213946/1‑150 (MQ=255) cTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCa > 2:3976346/1‑150 (MQ=255) tAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATc > 1:4039634/1‑150 (MQ=255) tAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATc > 1:2928480/1‑150 (MQ=255) aGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCa > 2:3846589/1‑150 (MQ=255) aGATCAAT‑AAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCAc < 1:531044/150‑1 (MQ=255) gATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCAc > 1:1489398/1‑150 (MQ=255) gATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCAc < 2:240105/150‑1 (MQ=255) cAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAg > 2:3246618/1‑150 (MQ=255) aaTAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGc < 2:1632379/150‑1 (MQ=255) aaaaGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGAt > 1:3203008/1‑150 (MQ=255) aaaGGCGCGCATCATACCATACTCCATAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGAtt < 1:383432/150‑1 (MQ=255) aaGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTg > 2:4961948/1‑150 (MQ=255) aGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGt > 1:4156573/1‑150 (MQ=255) aGGCGCGCATCATACCAAACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACAAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGt > 2:4573873/1‑150 (MQ=255) gcgcgcATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTca < 2:4379489/150‑1 (MQ=255) gcgcATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTcaca < 2:2131118/150‑1 (MQ=255) gcATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACaaa > 1:2807997/1‑150 (MQ=255) cataccatacTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATCAc > 2:2181974/1‑150 (MQ=255) cataccatacTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATCAc > 2:1986937/1‑150 (MQ=255) cataccatacTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATCAc > 1:4458497/1‑150 (MQ=255) cataccatacTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATCAc > 2:1227325/1‑150 (MQ=255) ataccatacTCCGTAACAAATGACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATCAcc < 2:4007147/150‑1 (MQ=255) accatacTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATCACCAg > 1:3582288/1‑150 (MQ=255) accatacTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATCACCAg < 1:2608009/150‑1 (MQ=255) accatacTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATCACCAg > 1:4857977/1‑150 (MQ=255) ccatacTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATCACCAGc > 1:4651233/1‑150 (MQ=255) ccatacTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATCACCAGc > 1:2081321/1‑150 (MQ=255) ccatacTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATCACCAGc > 2:3725363/1‑150 (MQ=255) catacTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATCACCAGCa > 1:3667995/1‑150 (MQ=255) catacTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATCACCAGCa > 2:118414/1‑150 (MQ=255) catacTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATCACCAGCa > 2:4936632/1‑150 (MQ=255) acTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATCACCAGCACGc > 2:4806835/1‑150 (MQ=255) ccGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATCACCAGCACGCCAc < 2:2560394/150‑1 (MQ=255) aCAAATTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATCACCAGCACGCCACGAtcg > 2:13323/1‑150 (MQ=255) aaaTTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATCACCAGCACGCCACGAtcgtc > 1:5118527/1‑150 (MQ=255) aaaGTACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATCACCAGCACGCCACGAtcgtc < 2:1935379/150‑1 (MQ=255) aTTACCTGGAGGATGGTATCGCAAGGAAACTACCCGCACGTGAAATGTCACGGGTGCGTGGCTCGGTCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACTAATCACCAGCACGCCACGATCGTCgg < 2:5077781/150‑1 (MQ=255) ttACCTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATCACCAGCACGCCACGATCGTCGGc < 2:2521713/150‑1 (MQ=255) cTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACCAATCACCAGCACGCCACGATCGTCGGCGTcg > 2:1364884/1‑150 (MQ=255) cTGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATCACCAGCACGCCACGATCGTCGGCGTca < 1:2372671/150‑2 (MQ=255) tGGAGGATGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCTGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATCACCAGCACGCCACGATCGTCGGCGTcgc > 2:2387756/1‑150 (MQ=255) aggaTGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATCACCAGCACGCCACGATCGTCGGCGTCGCGaa > 2:4853080/1‑150 (MQ=255) aggaTGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATCACCAGCACGCCACGATCGTCGGCGTCGCGaa > 2:3090677/1‑150 (MQ=255) ggaTGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATCACCAGCACGCCACGATCGTCGGCGTCGCGAAt < 1:4765195/150‑1 (MQ=255) ggaTGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATCACCAGCACGCCACGATCGTCGGCGTCGCGAAt > 2:1124226/1‑150 (MQ=255) aTGGTATCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATCACCAGCACGCCACGATCGTCGGCGTCGCGAATCa < 2:1004166/150‑1 (MQ=255) aTCGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATCACCAGCACGCCACGATCGTCGGCGTCGCGAATCAGTCGc > 1:3323806/1‑150 (MQ=255) cGCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATCACCAGCACGCCACGATCGTCGGCGTCGCGAATCAGTCGccc < 2:3635686/150‑1 (MQ=255) gCAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATCACCAGCACGCCACGATCGTCGGCGTCGCGAATCAGTCGCCCt < 1:4616427/150‑1 (MQ=255) cAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATCACCAGCACGCCACGATCGTCGGCGTCGCGAATCAGTCGCCCTa > 1:1721142/1‑150 (MQ=255) cAAGGAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATCACCAGCACGCCACGATCGTCGGCGTCGCGAATCAGTCGCCCTa > 1:1518504/1‑150 (MQ=255) aaGGAAACGAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATCACCAGCACGCCACGATCGTCGGCGTCGCGAATCAGTCGCCCTAc < 1:748911/150‑1 (MQ=255) gAAACTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATCACCAGCACGCCACGATCGTCGGCGTCGCGAATCAGTCGCCCTAcccc < 1:3009736/150‑1 (MQ=255) aaaCTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATCACCAGCACGCCACGATCGTCGGCGTCGCGAATCAGTCGCCCTAccccc > 1:4532623/1‑150 (MQ=255) aaCTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGTCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATCACCAGCACGCCACGATCGTCGGCGTCGCGAATCAGTCGCCCTACCCCCt < 2:640893/150‑1 (MQ=255) aaCTAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATCACCAGCACGCCACGATCGTCGGCGTCGCGAATCAGTCGCCCTACCCCCt > 2:770752/1‑150 (MQ=255) | CGTCGTTCCACAGGGCGACAGAGCAGGCCTCTGTCGCGGTATCGATAGCCAGAATTCGCATGGGTCTTCGTGCTTAGATCAATAAAAAGGCGCGCATCATACCATACTCCGTAACAAATTACCTGGAGGATGGTATCGCAAGGAAACGAACCGCACGGGCAATGTCACGGGTGCGTGGCGCGGGCGGCAGACTGGCGAGAAACGTCGCGCCGTAAGGACGCATCACCAGCCGATTGTCACAAATCACCAGCACGCCACGATCGTCGGCGTCGCGAATCAGTCGCCCTACCCCCT > CP009273/1885464‑1885757 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |