| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,102,922 | G→T | 8.5% | C48* (TGC→TGA) | wzxB ← | putative polisoprenol‑linked O‑antigen transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,102,922 | 0 | G | T | 8.5% | 625.4 / 23.5 | 183 | C48* (TGC→TGA) | wzxB | putative polisoprenol‑linked O‑antigen transporter |
| Reads supporting (aligned to +/- strand): ref base G (79/88); new base T (11/5); total (90/93) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.21e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 190 total aligned reads displayed.
ATGACGATAAGAACTATTTTTGAAAATATCACCGCCC‑AAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAATGGTAAAAGATAATTGCTACCTTGAACGACAGCCAGATATATAACGTTTCTTCTTAAAGATAATTTATTCGTATTCATGCAATT > CP009273/2102773‑2103071 | aTGACGATAAGAACTATTTTTGAAAATATCACCGCCC‑AAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTgg < 2:2470571/150‑1 (MQ=255)aTGACGATAAGAACTATTTTTGAAAATATCACCGCCC‑AAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTgg < 1:1455659/150‑1 (MQ=255)aTGACGATAAGAACTATTTTTGAAAATATCACCGCCC‑AAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTgg < 1:2482528/150‑1 (MQ=255) tGACGATAAGAACTATTTTTGAAAATATCACCGCCC‑AAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGc < 1:4117529/150‑1 (MQ=255) gACGATAAGAACTATTTTTGAAAATATCACCGCCC‑AAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTTTGAGATTGAAACCATATTCAAAAAACATTATCATATATAGCATAGTCGCTTGGCa > 2:2351379/1‑150 (MQ=255) gACGATAAGAACTATTTTTGAAAATATCACCGCCC‑AAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGTCa > 2:1419691/1‑150 (MQ=255) gACGATAAGAACTATTTTTGAAAATATCACCGCCC‑AAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCa > 2:3600444/1‑150 (MQ=255) gACGATAAGAACTATTTTTGAAAATATCACCGCCC‑AAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCa > 2:4927244/1‑150 (MQ=255) gACGATAAGAACTATTTTTGAAAATATCACCGCCC‑AAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCa < 1:5027035/150‑1 (MQ=255) aCGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCa < 2:4748682/150‑1 (MQ=255) cGATAAGAACTATTTTTGAAAATATCACCGCCC‑AAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCaaa > 1:2006952/1‑150 (MQ=255) gATAAGAACTATTTTTGAAAATATCACCGCCC‑AAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGTCaaaa < 1:2590414/150‑1 (MQ=255) aTAAGAACTATTTTTGAAAATATCACCGCCC‑AAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCaaaaa > 1:4237582/1‑150 (MQ=255) tAAGAACTATTTTTGAAAATATCACCGCCC‑AAAAAATAGACGTTACTTTATCAATACAATATGCTGCTTTGGCAAAAGACTGAGTTGATGAGAGATTGAAACCAGAATCAACAAACAAGAACATAGAAAGCATGCACGCTGGGCaaaagc > 2:2627306/1‑148 (MQ=255) aaGAACTATTTTTGAAAATATCACCGCCC‑AAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAAcc < 1:3252453/150‑1 (MQ=255) gAACTATTTTTGAAAATATCACCGCCC‑AAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGa > 1:4046566/1‑150 (MQ=255) aaCTATTTTTGAAAATATCACCGCCC‑AAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGaa < 1:110077/150‑1 (MQ=255) aCTATTTTTGAAAATATCACCGCCC‑AAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCg > 1:4998126/1‑147 (MQ=255) aCTATTTTTGAAAATATCACCGCCC‑AAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAat > 2:4391155/1‑150 (MQ=255) cTATTTTTGAAAATATCACCGCCC‑AAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAata < 1:1540291/150‑1 (MQ=255) tATTTTTGAAAATATCACCGCCC‑AAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAatat < 2:2849926/150‑1 (MQ=255) tttttGAAAATATCACCGCCC‑AAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGTCAAAAACCGAATATAc < 2:1338766/150‑1 (MQ=255) tttGAAAATATCACCGCCC‑AAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCg < 1:4865860/150‑1 (MQ=255) tttGAAAATATCACCGCCC‑AAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCg < 1:819613/150‑1 (MQ=255) gAAAATATCACCGCCC‑AAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGTCAAAAACCGAATATACCGaaa > 2:108457/1‑150 (MQ=255) gAAAATATCACCGCCC‑AAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGaaa > 2:2453774/1‑150 (MQ=255) atatCACCGCCC‑AAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAAtttt > 1:3332744/1‑150 (MQ=255) atCACCGCCC‑AAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCa < 1:3305859/150‑1 (MQ=255) atCACCGCCC‑AAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCa > 1:2522902/1‑150 (MQ=255) tCACCGCCC‑AAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAg > 1:3204534/1‑150 (MQ=255) aCCGCCC‑AAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGa > 2:4540459/1‑150 (MQ=255) cc‑AAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAg > 2:214082/1‑150 (MQ=255) aaaaaTAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAgtgt < 1:925644/150‑1 (MQ=255) aaaaTAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGtt < 2:3436973/150‑1 (MQ=255) aaaTAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTTGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGtta < 2:3245073/150‑2 (MQ=255) aaaTAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGtta < 2:658912/150‑2 (MQ=255) gTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGa > 2:3510070/1‑150 (MQ=255) gTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGa < 1:3720222/150‑1 (MQ=255) aCTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGatat < 2:3064736/150‑1 (MQ=255) aTCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGaaa < 1:1367985/150‑1 (MQ=255) tCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAAt > 1:2076385/1‑150 (MQ=255) cTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATg > 2:66557/1‑150 (MQ=255) tgctgcTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAATgg > 1:2120145/1‑150 (MQ=255) tgctgcTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAATgg > 1:3505689/1‑150 (MQ=255) tgctgaTTTGGCAATAATCAGAGTTGCTGTGAGATTGAAACCTTATTCAACGATCATTATCATATATATCATAGTCGCTTGGCAAAAACCTAATATACATAAATTTTCAGGACCAAGTGTTCTTACTAGATATGGAAATGTaatctttgt < 2:4987816/150‑8 (MQ=255) gctgctTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAATGGt < 1:4184071/150‑1 (MQ=255) gctgctTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAATGGt < 2:2517381/150‑1 (MQ=255) ctgctTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAATGGTa > 2:529236/1‑150 (MQ=255) tgctTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAATGGTaa > 1:3876881/1‑150 (MQ=255) tttGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAATGGTAAAAg < 1:2802781/150‑1 (MQ=255) ttGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAATGGTAAAAGa < 1:3625364/150‑1 (MQ=255) cAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAATGGTAAAAGATAAt > 2:4747102/1‑150 (MQ=255) aCTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAATGGTAAAAGATAATTGCt < 2:5042985/150‑1 (MQ=255) ctctGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAATGGTAAAAGATAATTGCTa < 1:4308000/150‑1 (MQ=255) tctGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAATGGTAAAAGATAATTGCTAc > 2:2665056/1‑150 (MQ=255) tGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAATGGTAAAAGATAATTGCTACCt < 2:986204/150‑1 (MQ=255) tGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAATGGTAAAAGATAATTGCTACCt > 1:2102237/1‑150 (MQ=255) tGAGTTGCTGTGAGATTGAAACCATAGTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAATGGTAAAAGATAATTGCTACCt < 2:986239/150‑1 (MQ=255) ttGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAATGGTAAAAGATAATTGCTACCTTGaa < 2:863143/150‑1 (MQ=255) ttGCTGAGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAATGGTAAAAGATAATTGCTACCTTGaa < 2:3888493/150‑1 (MQ=255) tGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAATGGTAAAAGATAATTGCTACCTTGAAc > 2:5112058/1‑150 (MQ=255) cTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGAGTGGCAAAAAACGAATAGACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAATGGTAAAAGATAATTGCTACCTTGAACGa < 2:3097782/150‑1 (MQ=255) tgtgAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAATGGTAAAAGATAATTGCTACCTTGAACGAc > 1:4756283/1‑150 (MQ=255) gagaTTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGTCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAATGGTAAAAGATAATTGCTACCTTGAACGACAGc < 2:3801352/150‑1 (MQ=255) agaTTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAATGGTAAAAGATAATTGCTACCTTGAACGACAGcc > 2:1588466/1‑150 (MQ=255) tGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAATGGTAAAAGATAATTGCTACCTTGAACGACAGCCAGat < 2:728942/150‑1 (MQ=255) aaaCCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAATGGTAAAAGATAATTGCTACCTTGAACGACAGCCAGatat > 1:852337/1‑150 (MQ=255) aaCCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAATGGTAAAAGATAATTGCTACCTTGAACGACAGCCAGatata < 1:888310/150‑1 (MQ=255) cATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAATGGTAAAAGATAATTGCTACCTTGAACGACAGCCAGATATATaa < 1:5074357/150‑1 (MQ=255) atTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAATGGTAAAAGATAATTGCTACCTTGAACGACAGCCAGATATATAACGt < 2:4991415/150‑1 (MQ=255) tCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAATGGTAAAAGATAATTGCTACCTTGAACGACAGCCAGATATATAACGttt < 1:1954147/150‑1 (MQ=255) caacaaACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAATGGTAAAAGATAATTGCTACCTTGAACGACAGCCAGATATATAACGTttc < 2:2266954/150‑1 (MQ=255) caaacaTTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAATGGTAAAAGATAATTGCTACCTTGAACGACAGCCAGATATATAACGTttcttc < 2:5133228/150‑1 (MQ=255) aaacaTTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAATGGTAAAAGATAATTGCTACCTTGAACGACAGCCAGATATATAACGTTtcttct < 1:4391155/150‑1 (MQ=255) acaTTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAATGGTAAAAGATAATTGCTANCTTGAACGACAGCCAGATATATAACGTTTCTTCTTa < 1:2680925/150‑1 (MQ=255) caTTATCATATATAGCATAGTCGCTTGTCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAATGGTAAAAGATAATTGCTACCTTGAACGACAGCCAGATATATAACGTTTCTTCTTaa > 1:4723503/1‑150 (MQ=255) caTTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAATGGTAAAAGATAATTGCTACCTTGAACGACAGCCAGATATATAACGTTTCTTCTTaa < 1:4216192/150‑1 (MQ=255) aTCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAATGGTAAAAGATAATTGCTACCTTGAACGACAGCCAGATATATAACGTTTCTTCTTAAAGAt > 1:3701412/1‑150 (MQ=255) aTCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAATGGTAAAAGATAATTGCTACCTTGAACGACAGCCAGATATATAACGTTTCTTCTTAAAGAt > 2:1273629/1‑150 (MQ=255) aTCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAATGGTAAAAGATAATTGCTACCTTGAACGACAGCCAGATATATAACGTTTCTTCTTAAAGAt > 1:4447619/1‑150 (MQ=255) tCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAATGGTAAAAGATAATTGCTACCTTGAACGACAGCCAGATATATAACGTTTCTTCTTAAAGATa < 1:2939492/150‑1 (MQ=255) atatatAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAATGGTAAAAGATAATTGCTACCTTGAACGACAGCCAGATATATAACGTTTCTTCTTAAAGATAAt > 2:4159526/1‑150 (MQ=255) ataGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAATGGTAAAAGATAATTGCTACCTTGAACGACAGCCAGATATATAACGTTTCTTCTTAAAGATAATTTAt > 1:1427412/1‑150 (MQ=255) taGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAATGGTAAAAGATAATTGCTACCTTGAACGACAGCCAGATATATAACGTTTCTTCTTAAAGATAATTTAtt > 1:642901/1‑150 (MQ=255) taGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAATGGTAAAAGATAATTGCTACCTTGAACGACAGCCAGATATATAACGTTTCTTCTTAAAGATAATTTAtt > 2:2316017/1‑150 (MQ=255) taGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAATGGTAAAAGATAATTGCTACCTTGAACGACAGCCAGATATATAACGTTTCTTCTTAAAGATAATTTAtt > 1:3084364/1‑150 (MQ=255) aGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAATGGTAAAAGATAATTGCTACCTTGAACGACAGCCAGATATATAACGTTTCTTCTTAAAGATAATTTATTc < 1:3934811/150‑1 (MQ=255) aGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAATGGTAAAAGATAATTGCTACCTTGAACGACAGCCAGATATATAACGTTTCTTCTTAAAGATAATTTATTc < 1:3141060/150‑1 (MQ=255) aGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAATGGTAAAAGATAATTGCTACCTTGAACGACAGCCAGATATATAACGTTTCTTCTTAAAGATAATTTATTc < 1:2771184/150‑1 (MQ=255) aGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAATGGTAAAAGATAATTGCTACCTTGAACGACAGCCAGATATATAACGTTTCTTCTTAAAGATAATTTATTc > 1:1126514/1‑150 (MQ=255) cATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAATGGTAAAAGATAATTGCTACCTTGAACGACAGCCAGATATATAACGTTTCTTCTTAAAGATAATTTATTCGt < 1:1288977/150‑1 (MQ=255) aTAGTCGCTTGTCAAAAAACGAATATACCGAAATTTTAAGGACCAAGTGTTCTTACAAGATATTGAAATTTAATCAAAGGTAAAAGATAATTTCTACCTTGAAAGACAGCCAGATATAAAAAGTTTCTTATTAAAGATAATTTATTCTTa > 1:3468206/1‑150 (MQ=255) aGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAATGGTAAAAGATAATTGCTACCTTGAACGACAGCCAGATATATAACGTTTCTTCTTAAAGATAATTTATTCGTAtt < 2:2690215/150‑1 (MQ=255) gTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAATGGTAAAAGATAATTGCTACCTTGAACGACAGCCAGATATATAACGTTTCTTCTTAAAGATAATTTATTCGTATTc < 2:2102300/150‑1 (MQ=255) gTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAATGGTAAAAGATAATTGCTACCTTGAACGACAGCCAGATATATAACGTTTCTTCTTAAAGATAATTTATTCGTATTc < 2:2102237/150‑1 (MQ=255) cGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAATGGTAAAAGATAATTGCTACCTTGAACGACAGCCAGATATATAACGTTTCTTCTTAAAGATAATTTATTCGTATTCAt > 1:5090706/1‑150 (MQ=255) cGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAATGGTAAAAGATAATTGCTACCTTGAACGACAGCCAGATATATAACGTTTCTTCTTAAAGATAATTTATTCGTATTCAt < 2:601147/150‑1 (MQ=255) cGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAATGGTAAAAGATAATTGCTACCTTGAACGACAGCCAGATATATAACGTTTCTTCTTAAAGATAATTTATTCGTATTCAt > 1:2673092/1‑150 (MQ=255) gCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAATGGTAAAAGATAATTGCTACCTTGAACGACAGCCAGATATATAACGTTTCTTCTTAAAGATAATTTATTCGTATTCATg < 1:4540459/150‑1 (MQ=255) ggCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAATGGTAAAAGATAATTGCTACCTTGAACGACAGCCAGATATATAACGTTTCTTCTTAAAGATAATTTATTCGTATTCATGCaat > 1:1496215/1‑150 (MQ=255) | ATGACGATAAGAACTATTTTTGAAAATATCACCGCCC‑AAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAATGGTAAAAGATAATTGCTACCTTGAACGACAGCCAGATATATAACGTTTCTTCTTAAAGATAATTTATTCGTATTCATGCAATT > CP009273/2102773‑2103071 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |