| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,109,738 | C→A | 5.2% | E291* (GAA→TAA) | wcaL ← | putative glycosyl transferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,109,738 | 0 | C | A | 5.2% | 1130.1 / 21.2 | 306 | E291* (GAA→TAA) | wcaL | putative glycosyl transferase |
| Reads supporting (aligned to +/- strand): ref base C (137/153); new base A (10/6); total (147/159) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.06e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.91e-01 | |||||||||||
Only 100 of 308 total aligned reads displayed.
CGGTATTCCACTATGCAGAGTAGAAACCACCGGAATACCGACCGCCATCGCTTCCATTAGCGCCACCGGAATACCTTCCATATCACCATCCGCACCTGTAACCGATGGCAACAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAGTTGATATTGTTCGATGAGGGTGCGCAGGCGTCTTTCCCACGGGCCAATGCCGAGGATGCGATAGCGAAATGCCACGCCCTGCTCTTTCAACTGACGGCAGGCTTCGA > CP009273/2109589‑2109887 | tCCACTATGCAGAGTAGAAACCACCGGAATACCGACCGCCATCGCTTCCATTAGCGCCACCGGAATACCTTCCATATCACCATCCGCACCTGTAACCGATGGCAACAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTCATGGCt < 2:4610719/150‑1 (MQ=255) cACTATGCAGAGTAGAAACCACCGGAATACCGACCGCCATCGCTTCCATTAGCGCCACCGGAATACCTTCCATATCACCATCCGCACCTGTAACCGATGGCAACAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTCATGGCTCg < 2:2378409/150‑1 (MQ=255) aCTATGCAGAGTAGAAACCACCGGAATACCGACCGCCATCGCTTCCATTAGCGCCACCGGAATACCTTCCATATCACCATCCGCACCTGTAACCGATGGCAACAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTCATGGCTCgg < 1:4248752/150‑1 (MQ=255) cTATGCAGAGTAGAAACCACCGGAATACCGACCGCCATCGCTTCCATTAGCGCCACCGGAATACCTTCCATATCACCATCCGCACCTGTAACCGATGGCAACAGGAAGACCTCCGCGTCGTCGAGCATCGCTTTCACTTCATGGCTCGGt > 1:1854747/1‑150 (MQ=255) aTGCAGAGTAGAAACCACCGGAATACCGACCGCCATCGCTTCCATTAGCGCCACCGGAATACCTTCCATATCACCATCCGCACCTGTAACCGATGGCAACAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTCATGGCTCGGttt < 1:449426/150‑1 (MQ=255) tGCAGAGTAGAAACCACCGGAATACCGACCGCCATCGCTTCCATTAGCGCCACCGGAATACCTTCCATATCACCATCCGCACCTGTAACCGATGGCAACAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTCATGGCTCGGTTTa > 2:2331683/1‑150 (MQ=255) tGCAGAGTAGAAACCACCGGAATACCGACCGCCATCGCTTCCATTAGCGCCACCGGAATACCTTCCATATCACCATCCGCACCTGTAACCGATGGCAACAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTCATGGCTCGGTTTa < 1:5116056/150‑1 (MQ=255) cAGAGTAGAAACCACCGGAATACCGACCGCCATCGCTTCCATTAGCGCCACCGGAATACCTTCCATATCACCATCCGCACCTGTAACCGATGGCAACAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTCATGGCTCGGTTTaaa > 1:144593/1‑150 (MQ=255) agagTAGAAACCACCGGAATACCGACCGCCATCGCTTCCATTAGCGCCACCGGAATACCTTCCATATCACCATCCGCACCTGTAACCGATGGCAACAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTCATGGCTCGGTTTAAAg < 2:132755/150‑1 (MQ=255) tAGAAACCACCGGAATACCGACCGCCATCGCTTCCATTAGCGCCACCGGAATACCTTCCATATCACCATCCGCACCTGTAACCGATGGCAACAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCg < 2:1888574/150‑1 (MQ=255) tAGAAACCACCGGAATACCGACCGCCATCGCTTCCATTAGCGCCACCGGAATACCTTCCATATCACCATCCGCACCTGTAACCGATGGCAACAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCg > 1:4793931/1‑150 (MQ=255) gAAACCACCGGAATACCGACCGCCATCGCTTCCATTAGCGCCACCGGAATACCTTCCATATCACCATCCGCACCTGTAACCGATGGCAACAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGc > 2:5065980/1‑150 (MQ=255) aaCCACCGGAATACCGACCGCCATCGCTTCCATTAGCGCCACCGGAATACCTTCCATATCACCATCCGCACCTGTAACCGATGGCAACAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCAt < 1:249561/150‑1 (MQ=255) accGGAATACCGACCGCCATCGCTTCCATTAGCGCCACCGGAATACCTTCCATATCACCATCCGCACCTGTACCCGATGGCAACAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTcc < 2:501781/150‑1 (MQ=255) accGGAATACCGACCGCCATCGCTTCCATTAGCGCCACCGGAATACCTTCCATATCACCATCCGCACCTGTAACCGATGGCAACAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTcc < 1:967359/150‑1 (MQ=255) accGGAATACCGACCGCCATCGCTTCCATTAGCGCCACCGGAATACCTTCCATATCACCATCCGCACCTGTAACCGATGGCAACAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTcc < 2:2630062/150‑1 (MQ=255) accGGAATACCGACCGCCATCGCTTCCAGTAGCGCCACCGGAATACCTTCCATATCACCATCCGCACCTGTAACCGATGGCAACAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTcc > 2:72721/1‑150 (MQ=255) ccGGAATACCGACCGCCATCGCTTCCATTAGCGCCACCGGAATACCTTCCATATCACCATCCGCACCTGTAACCGATGGCAACAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTcca > 1:4203663/1‑150 (MQ=255) gAATACCGACCGCCATCGCTTCCATTAGCGCCACCGGAATACCTTCCATATCACCATCCGCACCTGTAACCGATGGCAACAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTccacca < 2:1804767/150‑1 (MQ=255) aaTACCGACCGCCATCGCTTCCATTAGCGCCACCGGAATACCTTCCATATCACCATCCGCACCTGTAACCGATGGCAACAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTCcaccac < 2:2782863/150‑1 (MQ=255) aaTACCGACCGCCATAGCTTCCATTAGCGCCACCGGAATACCTTCCATATCACCATCCGCACCTGTAACCGATGGCAACAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTAATGGCTCGGTTTAAAGCCCGGCATCTCcaccac > 1:4157678/1‑150 (MQ=255) tACCGACCGCCATCGCTTCCATTAGCGCCACCGGAATACCTTCCATATCACCATCCGCACCTGTAACCGATGGCAACAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTCCACCACAt > 1:559055/1‑150 (MQ=255) ccgaccgCCATCGCTTCCATTAGCGCCACCGGAATACCTTCCATATCACCATCCGCACCTGTAACCGATGGCAACAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCt < 1:345618/150‑1 (MQ=255) cgaccgCCATCGCTTCCATTAGCGCCACCGGAATACCTTCCATATCACCATCCGCACCTGTAACCGATGGCAACAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCtt < 2:4478204/150‑1 (MQ=255) gaccgCCATCGCTTCCATTGGCGCCACCGGAATACCTTCCATATCACCATCCGCACCTGTAACCGATGGCAACAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTc > 2:1579009/1‑150 (MQ=255) cgCCATCGCTTCCATTAGCGCCACCGGAATACCTTCCATATCACCATCCGCACCTGTAACCGATGGCAACAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTAATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAg < 2:3058912/150‑1 (MQ=255) gCCATCGCTTCCATTAGCGCCACCGGAATACCTTCCATATCACCATCCGCACCTGTAACCGATGGCAACAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAGt > 1:3994491/1‑150 (MQ=255) gCCATCGCTTCCATTAGCGCCACCGGAATACCTTCCATATCACCATCCGCACCTGTAACCGATGGCAACAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTCATGGATCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAGt > 1:1416210/1‑150 (MQ=255) ccATCGCTTCCATTAGCGCCACCGGAATACCTTCCATATCACCATCCGCACCTGTAACCGATGGCAACAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAGtt > 1:323190/1‑150 (MQ=255) cATCGCTTCCATTAGCGCCACCGGAATACCTTCCATATCACCATCCGCACCTGTAACCGATGGCAACAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAGTTg > 1:1928101/1‑150 (MQ=255) tCGCTTCCATTAGCGCCACCGGAATACCTTCCATATCACCATCCGCACCTGTAACCGATGGCAACAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAGTTGat < 1:4750202/150‑1 (MQ=255) cGCTTCCATTAGCGCCACCGGAATACCTTCCATATCACCATCCGCACCTGTAACCGATGGCAACAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAGTTGata > 2:3826254/1‑150 (MQ=255) gCTTCCATTAGCGCCACCGGAATACCTTCCATATCACCATCCGCACCTGTAACCGATGGCAACAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAGTTGatat > 2:4026015/1‑150 (MQ=255) ttCCATTAGCGCCACCGGAATACCTTCCATATCACCATCCGCACCTGTAACCGATGGCAACAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAGTTGATATTg > 1:1691880/1‑150 (MQ=255) aTTAGCGCCACCGGAATACCATCCATATCACCATCCGCACCTGTAACCGATGGCAACAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAGTTGATATTGTTCg > 2:3580623/1‑150 (MQ=255) ttAGCGCCACCGGAATACCTTCCATATCACCATCCGCACCTGTAACCGATGGCAACAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAGTTGATATTGTTCGa > 2:3971078/1‑150 (MQ=255) tAGCGCCACCGGAATACCTTCCATATCACCATCCGCACCTGTAACCGATGGCAACAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAGTTGATATTGTTCGAt > 2:3091915/1‑150 (MQ=255) cgcCACCGGAATACCTTCCATATCACCATCCGCACCTGTAACCGATGGCAACAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAGTTGATATTGTTCGATGAg < 1:1223176/150‑1 (MQ=255) gcCACCGGAATACCTTCCATATCACCATCCGCACCTGTAACCGATGGCAACAGGAAGACGTCCGCGTCGTCGAGCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAGTTGATATTGTTCGATGAgg < 2:5152659/150‑1 (MQ=255) gcCACCGGAATACCTTCCATATCACCATCCGCACCTGTAACCGATGGCAACAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAGTTGATATTGTTCGATGAgg < 2:5040382/150‑1 (MQ=255) aCCGGAATACCTTCCATATCACCATCCGCACCTGTAACCGATGGCAACAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAGTTGATATTGTTCGATGAGGGTg < 1:1605523/150‑1 (MQ=255) aCCGGAATACCTTCCATATCACCATCCGCACCTGTAACCGATGGCAACAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTAATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAGTTGATATTGTTCGATGAGGGTg > 2:1254542/1‑150 (MQ=255) cGGAATACCTTCCATATCACCATCCGCACCTGTAACCGATGGCAACAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAGTTGATATTGTTCGATGAGGGTgcg < 1:432360/150‑1 (MQ=255) gAATACCTTCCATATCACCATCCGCACCTGTAACCGATGGCAACAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAGTTGATATTGTTCGATGAGGGTGCGCa < 2:4868031/150‑1 (MQ=255) aaTACCTTCCATATCACCATCCGCACCTGTAACCGATGGCAACAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAGTTGATATTGTTCGATGAGGGTGCGCAg < 1:3950792/150‑1 (MQ=255) ccTTCCATATCACCATCCGCACCTGTAACCGATGGCAACAGGAAGACATCCGCGGCGGCGAGCCTCGCTTTCACTTCATGGCTCGGTGTCAAGCCCGGCATCTCCACCCCATCTGCCCGTTGATATTGGTCGCGGCGGGTGCGCAGGCGt > 2:2677917/1‑150 (MQ=255) cTTCCATATCACCATCCGCACCTGTAACCGATGGCAACAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAGTTGATATTGTTCGATGAGGGTGCGCAGGCGTc < 2:4875929/150‑1 (MQ=255) cATATCACCATCCGCACCTGTAACCGATGGCAACAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAGTTGATATTGTTCGATGAGGGTGCGCAGGCGTCTTTc < 1:379364/150‑1 (MQ=255) atatCACCATCCGCACCTGTAACCGATGGCAACAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAGTTGATATTGTTCGATGAGGGTGCGCAGGCGTCTTTcc > 2:3960216/1‑150 (MQ=255) atatCACCATCCGCACCTGTAACCGATGGCAACAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAGTTGATATTGTTCGATGAGGGTGCGCAGGCGTCTTTcc > 2:2038982/1‑150 (MQ=255) tatCACCATCCGCACCTGTAACCGATGGCAACAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAGTTGATATTGTTCGATGAGGGTGCGCAGGCGTCTTTccc < 2:43539/150‑1 (MQ=255) tatCACCATCCGCACCTGTAACCGATGGCAACAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAGTTGATATTGTTCGATGAGGGTGCGCAGGCGTCTTTccc < 1:1314291/150‑1 (MQ=255) atCACCATCCGCACCTGTAACCGATGGCAACAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTCCTGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAGTTGATATTGTTCGATGAGGGTGCGCAGGCGTCTTTCCCa < 2:2232321/150‑1 (MQ=255) atCACCATCCGCACCTGTAACCGATGGCAACAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAGTTGATATTGTTCGATGAGGGTGCGCAGGCGTCTTTCCCa < 2:436899/150‑1 (MQ=255) aCCATCCGCACCTGTAACCGATGGCAACAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAGTTGATATTGTTCGATGAGGGTGCGCAGGCGTCTTTCCCACgg > 2:1843742/1‑150 (MQ=255) ccGCACCTGTAACCGATGGCAACAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAGTTGATATTGTTCGATGAGGGTGCGCAGGCGTCTTTCCCACGGGCCaa < 1:3463396/150‑1 (MQ=255) cGCACCTGTAACCGATGGCAACAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAGTTGATATTGTTCGATGAGGGTGCGCAGGCGTCTTTCCCACGGGCCAAt < 1:4414421/150‑1 (MQ=255) cGCACCTGTAACCGATGGCAACAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAGTTGATATTGTTCGATGAGGGTGCGCAGGCGTCTTTCCCACGGGCCAAt < 1:3663619/150‑1 (MQ=255) aCCTGTAACCGATGGCAACAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAGTTGATATTGTTCGATGAGGGTGCGCAGGCGTCTTTCCCACGGGCCAATGcc < 2:3799908/150‑1 (MQ=255) aCCTGTAACCGATGGCAACAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAGTTGATATTGTTCGATGAGGGTGCGCAGGCGTCTTTCCCACGGGCCAATGcc > 1:2906729/1‑150 (MQ=255) aCCTGTAACCGATGGCAACAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTAATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAGTTGATATTGTTCGATGAGGGTGCGCAGGCGTCTTTCCCACGGGCCAATGcc < 1:4817175/150‑1 (MQ=255) tGTAACCGATGGCAACAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAGTTGATATTGTTCGATGAGGGTGCGCAGGCGTCTTTCCCACGGGCCAATGCCGAg < 2:4213385/150‑1 (MQ=255) gTAACCGATGGCAACAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTAATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAGTTGATATTGTTCGATGAGGGTGCGCAGGCGTCTTTCCCACGGGCCAATGCCGAgg > 2:1966539/1‑150 (MQ=255) tAACCGATGGCAACAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAGTTGATATTGTTCGATGAGGGTGCGCAGGCGTCTTTCCCACGGGCCAATGCCGAGGa > 2:2840117/1‑150 (MQ=255) ccGATGGCAACAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAGTTGATATTGTTCGATGAGGGTGCGCAGGCGTCTTTCCCACGGGCCAATGCCGAGGATGc < 2:2110399/150‑1 (MQ=255) ccGATGGCAACAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAGTTGATATTGTTCGATGAGGGTGCGCAGGCGTCTTTCCCACGGGCCAATGCCGAGGATGc < 1:4125547/150‑1 (MQ=255) cGATGGCAACAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAGTTGATATTGTTCGATGAGGGTGCGCAGGCGTCTTTCCCACGGGCCAATGCCGAGGATGCg > 1:2518539/1‑150 (MQ=255) aTGGCAACAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAGTTGATATTGTTCGATGAGGGTGCGCAGGCGTCTTTCCCACGGGCCAATGCCGAGGATGCGAt < 2:16925/150‑1 (MQ=255) aTGGCAACAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAGTTGATATTGTTCGATGAGGGTGCGCAGGCGTCTTTCCCACGGGCCAATGCCGAGGATGCGAt > 1:2784659/1‑150 (MQ=255) ggCAACAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTCGTGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAGTTGATATTGTTCGATGAGGGTGCGCAGGCGTCTTTCCCACGGGCCAATGCCGAGGATGCGATAg < 2:2467164/150‑1 (MQ=255) ggCAACAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAGTTGATATTGTTCGATGAGGGTGCGCAGGCGTCTTTCCCACGGGCCAATGCCGAGGATGCGATAg < 1:1194359/150‑1 (MQ=255) aaCAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAGTTGATATTGTTCGATGAGGGTGCGCAGGCGTCTTTCCCACGGGCCAATGCCGAGGATGCGATAGCGa < 2:816707/150‑1 (MQ=255) aaCAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAGTTGATATTGTTCGATGAGGGTGCGCAGGCGTCTTTCCCACGGGCCAATGCCGAGGATGCGATAGCGa > 2:1343988/1‑150 (MQ=255) aaCAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAGTTGATATTGTTCGATGAGGGTGCGCAGGCGTCTTTCCCACGGGCCAATGCCGAGGATGCGATAGCGa > 2:1626433/1‑150 (MQ=255) aaCAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAGTTGATATTGTTCGATGAGGGTGCGCAGGCGTCTTTCCCACGGGCCAATGCCGAGGATGCGATAGCGa > 1:534440/1‑150 (MQ=255) cAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAGTTGATATTGTTCGATGAGGGTGCGCAGGCGTCTTTCCCACGGGCCAATGCCGAGGATGCGATAGCGaaa > 2:2915709/1‑150 (MQ=255) cAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAGTTGATATTGTTCGATGAGGGTGCGCAGGCGTCTTTCCCACGGGCCAATGCCGAGGATGCGATAGCGaaa > 1:292898/1‑150 (MQ=255) cAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAGTTGATATTGTTCGATGAGGGTGCGCAGGCGTCTTTCCCACGGGCCAATGCCGAGGATGCGATAGCGaaa > 1:2997887/1‑150 (MQ=255) aGACATCCGCGTCGTCGAGCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAGTTGATATTGTTCGATGAGGGTGCGCAGGCGTCTTTCCCACGGGCCAATGCCGAGGATGCGATAGCGAAATGCCa < 1:1023499/150‑1 (MQ=255) aGACATCCGCGTCGTCGAGCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAGTTGATATTGTTCGATGAGGGTGCGCAGGCGTCTTTCCCACGGGCCAATGCCGAGGATGCGATAGCGAAATGCCa > 1:273229/1‑150 (MQ=255) aCATCCGCGTAGTCGAGCATAGCTTTAACTTCATGGCTCGGTTTAAAGCCCTGCATCTCCACCACATCTTCCAGTTTATATTGTTCGATGAGGGTGCGCAGGCGTCTTTCCCACGTGCCAATTCCTAGGATGCGATAGCGAATTGCCACg < 2:1530887/150‑1 (MQ=255) ccGCGTCGTCGAGCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAGTTGATATTGTTCGATGAGGGTGCGCAGGCGTCTTTCCCACGGGCCAATGCCGAGGATGCGATAGCGAAATGCCACGCCCt > 1:3899234/1‑150 (MQ=255) gcgTCGTCGAGCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAGTTGATATTGTTCGATGAGGGTGCGCAGGCGTCTTTCCCACGGGCCAATGCCGAGGATGCGATAGCGAAATGCCACGCCCTGc > 2:34097/1‑150 (MQ=255) cgtcgtCGAGCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAGTTGATATTGTTCGATGAGGGTGCGCAGGCGTCTTTCCCACGGGCCAATGCCGAGGATGCGATAGCGAAATGCCACGCCCTGct < 2:1102181/150‑1 (MQ=255) cgtcgtCGAGCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAGTTGATATTGTTCGATGAGGGTGCGCAGGCGTCTTTCCCACGGGCCAATGCCGAGGATGCGATAGCGAAATGCCACGCCCTGct < 1:2165828/150‑1 (MQ=255) gtcgtcGAGCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAGTTGATATTGTTCGATGAGGGTGCGCAGGCGTCTTTCCCACGGGCCAATGCCGAGGATGCGATAGCGAAATGCCACGCCCTGctc > 2:3497097/1‑150 (MQ=255) tcgAGCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAGTTGATATTGTTCGATGAGGGTGCGCAGGCGTCTTTCCCACGGGCCAATGCCGAGGATGCGATAGCGAAATGCCACGCCCTGCTCTTTc > 1:5149040/1‑150 (MQ=255) cgAGCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAGTTGATATTGTTCGATGAGGGTGCGCAGGCGTCTTTCCCACGGGCCAATGCCGAGGATGCGATAGCGAAATGCCACGCCCTGCTCTTTCa < 2:147253/150‑1 (MQ=255) cgAGCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAGTTGATATTGTTCGATGAGGGTGCGCAGGCGTCTTTCCCACGGGCCAATGCCGAGGATGCGATAGCGAAATGCCACGCCCTGCTCTTTCa < 1:3394432/150‑1 (MQ=255) gAGCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAGTTGATATTGTTCGATGAGGGTGCGCAGGCTTCTTTCCCACGGGCCAATGCCGAGGATGCGATAGCGAAATGCCACGCCCTGCTCTTTCaa < 1:1493759/150‑1 (MQ=255) gAGCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAGTTGATATTGTTCGATGAGGGTGCGCAGGCGTCTTTCCCACGGGCCAATGCCGAGGATGCGATAGCGAAATGCCACGCCCTGCTCTTTCaa > 2:4151255/1‑150 (MQ=255) gCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAGTTGATATTGTTAGATGAGGGTGCGCAGGCGTCTTTCCCACGGGCCAATGCCGAGGATGCGATAGCGAAATGCCACGCCCTGCTCTTTCAACt < 1:2318142/150‑1 (MQ=255) aTCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAGTTGATATTGTTCGATGAGGGTGCGCAGGCGTCTTTCCCACGGGCCAATGCCGAGGATGCGATAGCGAAATGCCACGCCCTGCTCTTTCAACTGa < 1:837765/150‑1 (MQ=255) aTCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAGTTGATATTGTTCGATGAGGGTGCGCAGGCGTCTTTCCCACGGGCCAATGCCGAGGATGCGATAGCGAAATGCCACGCCCTGCTCTTTCAACTGa > 2:4661554/1‑150 (MQ=255) aTCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAGTTGATATTGTTCGATGAGGGTGCGCAGGCGTCTTTCCCACGGGCCAATGCCGAGGATGCGATAGCGAAATGCCACGCCCTGCTCTTTCAACTGa > 1:1515721/1‑150 (MQ=255) cGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAGTTGATATTGTTCGATGAGGGTGCGCAGGCGTCTTTCCCACGGGCCAATGCCGAGGATGCGATAGCGAAATGCCACGCCCTGCTCTTTCAACTGACg < 1:4582657/150‑1 (MQ=255) cTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAGTTGATATTGTTCGATGAGGGTGCGCAGGCGTCTTTCCCACGGGCCAATGCCGAGGATGCGATAGCGAAATGCCACGCCCTGCTCTTTCAACTGACGGc < 2:3314302/150‑1 (MQ=255) ttCATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAGTTGATATTGTTCGATGAGGGTGCGCAGGCGTCTTTCCCACGGGCCAATGCCGAGGATGCGATAGCGAAATGCCACGCCCTGCTCTTTCAACTGACGGCAGGCTTc < 1:3826254/150‑1 (MQ=255) tCATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAGTTGATATTGTTCGATGAGGGTGCGCAGGCGTCTTTCCCACGGGCCAATGCCGAGGATGCGATAGCGAAATGCCACGCCCTGCTCTTTCAACTGACGGCAGGCTTCg < 2:905788/150‑1 (MQ=255) cATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAGTTGATATTGTTCGATGAGGGTGCGCAGGCGTCTTTCCCACGGGCCAATGCCGAGGATGCGATAGCGAAATGCCACGCCCTGCTCTTTCAACTGACGGCAGGCTTCGa < 1:372228/150‑1 (MQ=255) | CGGTATTCCACTATGCAGAGTAGAAACCACCGGAATACCGACCGCCATCGCTTCCATTAGCGCCACCGGAATACCTTCCATATCACCATCCGCACCTGTAACCGATGGCAACAGGAAGACATCCGCGTCGTCGAGCATCGCTTTCACTTCATGGCTCGGTTTAAAGCCCGGCATCTCCACCACATCTTCCAGTTGATATTGTTCGATGAGGGTGCGCAGGCGTCTTTCCCACGGGCCAATGCCGAGGATGCGATAGCGAAATGCCACGCCCTGCTCTTTCAACTGACGGCAGGCTTCGA > CP009273/2109589‑2109887 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |