| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,122,653 | C→T | 100% | W160* (TGG→TAG) | wcaE ← | putative glycosyl transferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,122,653 | 0 | C | T | 100.0% | 836.5 / NA | 248 | W160* (TGG→TAG) | wcaE | putative glycosyl transferase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (114/134); total (114/134) | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 248 total aligned reads displayed.
CACAATTCCATATTATTGGTGGTAGATACCCCACCCATGGAAAATTCAGACACCAGGCCATTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCCATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGTTTAATTTTATGCCCGTCGCCAAAATCCAGCAGCGCATCGCCGGTGATCATCACGTTA > CP009273/2122506‑2122799 | acaATTCCATATTATTGGTGGTAGATACCCCACCCATGGAAAATTCAGACACCAGGCCATTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTAtt < 1:3455527/150‑1 (MQ=255) acaATTCCATATTATTGGTGGTAGATACCCCACCCATGGAAAATTCAGACACCAGGCCATTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTAtt < 1:4145841/150‑1 (MQ=255) acaATTCCATATTATTGGTGGTAGATACCCCACCCATGGAAAATTCAGACACCAGGCCATTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTAtt < 2:3787073/150‑1 (MQ=255) aaTTCCATATTATTGGTGGTAGATACCCCACCCATGGAAAATTCAGACACCAGGCCATTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTAtttt < 1:1443223/150‑1 (MQ=255) aaTTCCATATTATTGGTGGTAGATACCCCACCCATGGAAAATTCAGACACCAGGCCATTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTAtttt < 2:4124228/150‑1 (MQ=255) tCCATATTATTGGTGGTAGATACCCCACCCATGGAAAATTCAGACACCAGGCCATTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTc < 2:2275542/150‑1 (MQ=255) atatTATTGGTGGTAGATACCCCACCCATGGAAAATTCAGACACCAGGCCATTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAg < 2:4623947/150‑1 (MQ=255) attattGGTGGTAGATACCCCACCCATGGAAAATTCAGACACCAGGCCATTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGca < 2:3828918/150‑2 (MQ=255) attGGTGGTAGATACCCCACCCATGGAAAATTCAGACACCAGGCCATTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGa < 2:3563591/150‑1 (MQ=255) gtAGATACCCCACCCATGGAAAATTCAGACACCAGGCCATTGAGTTTTTTAAATGCATAACCGGCTTTATTCATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAggg < 2:4213134/150‑1 (MQ=255) gtAGATACCCCACCCATGGAAAATTCAGACACCAGGCCATTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAggg < 1:3727568/150‑1 (MQ=255) gtAGATACCCCACCCATGGAAAATTCAGACACCAGGCCATTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAggg < 1:4943184/150‑1 (MQ=255) gtAGATACCCCACCCATGGAAAATTCAGACACCAGGCCATTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAggg > 2:101267/1‑150 (MQ=255) tAGATACCCCACCCATGGAAAATTCAGACACCAGGCCATTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGa > 1:3014799/1‑150 (MQ=255) tAGATACCCCACCCATGGAAAATTCAGACACCAGGCCATTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGa < 1:4729529/150‑1 (MQ=255) aGATACCCCACCCATGGAAAATTCAGACACCAGGCCATTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGaa < 2:641206/150‑1 (MQ=255) tACCCCACCCATGGAAAATTCAGACACCAGGCCATTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGaaaaa > 2:1165061/1‑150 (MQ=255) ccccACCCATGGAAAATTCAGACACCAGGCCATTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAata > 2:4874123/1‑150 (MQ=255) cccacccaTGGAAAATTCAGACACCAGGCCATTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAatat > 1:375185/1‑150 (MQ=255) ccacccaTGGAAAATTCAGACACCAGGCCATTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATc < 1:4797576/150‑1 (MQ=255) ccaTTGAAAATTCAGACACCAGGCCATTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCTTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCt < 2:4210737/150‑1 (MQ=255) ccaTGGAAAATTCAGACACCAGGCCATTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCt > 1:4366815/1‑150 (MQ=255) acaTGGAAAATTCAGACACCAGGCCATTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCt > 2:4287347/2‑150 (MQ=255) aTGGAAAATTCAGACACCAGGCCATTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCtga > 2:2844049/1‑150 (MQ=255) gAAAATTCAGACACCAGGCCATTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGTCtgatga < 1:1116967/150‑1 (MQ=255) aaaaTTCGGACACCAGGCCATTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATCCAGGGAAAAATATCGCCTGATGAc > 1:448765/1‑150 (MQ=255) aaaaTTCAGACACCAGGCCATTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGAc < 2:1058113/150‑1 (MQ=255) aaaaTTCAGACACCAGGCCATTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGAc < 2:1393144/150‑1 (MQ=255) aaaTTCAGACACCAGGCCATTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTCTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACt < 2:1639740/150‑1 (MQ=255) aaTTCAGACACCAGGCCATTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTg < 2:1201488/150‑1 (MQ=255) tCAGACACCAGGCCATTGAGTTTTTTAAATGCATCACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGAGGACTGGCg < 1:2800216/150‑1 (MQ=255) tCAGACACCAGGCCATTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCg < 1:1228935/150‑1 (MQ=255) tCAGACACCAGGCCATTGAGTTTTTTAAATGCAAAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCg > 1:4547603/1‑150 (MQ=255) cAGACACCAGGCCATTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCgg < 1:5484/150‑1 (MQ=255) aGACACCAGGCCATTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCggg < 2:3926603/150‑1 (MQ=255) aGACACCAGGCCATTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCggg > 2:525014/1‑150 (MQ=255) acacCAGGCCATTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCa < 1:4344742/150‑1 (MQ=255) ccAGGCCATTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTATTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGc > 1:3930148/1‑150 (MQ=255) aGGCCATTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCtg > 2:3428381/1‑150 (MQ=255) ccATTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGa < 2:4067085/150‑1 (MQ=255) cATTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGAt > 1:2126342/1‑150 (MQ=255) aTTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATa < 1:3109386/150‑1 (MQ=255) aTTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATa < 2:4856033/150‑1 (MQ=255) aGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGATATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGCTAAata > 2:1475499/1‑150 (MQ=255) gTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGTAGGCTGTGATAAatat > 2:4029702/1‑150 (MQ=255) tttAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCa < 2:3562799/150‑1 (MQ=255) tttAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCa > 1:1907812/1‑150 (MQ=255) tttAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCa < 2:2367074/150‑1 (MQ=255) aaTGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGccc > 1:3194289/1‑150 (MQ=255) tGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGACTGTGATAAATATACCAGCCCgg > 1:2546148/1‑150 (MQ=255) cATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGtt > 2:2997128/1‑150 (MQ=255) cATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGtt < 1:1147618/150‑1 (MQ=255) aTAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGttt < 1:188815/150‑1 (MQ=255) aTAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGttt < 1:4271464/150‑1 (MQ=255) tAACCGGCTTTATAAATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTg < 2:3365198/150‑1 (MQ=255) aaCCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTgg > 1:4705571/1‑150 (MQ=255) aaCCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTgg > 2:3244368/1‑150 (MQ=255) cctgatttATACATTTTGGCTGCCATTGTGTAGTCGGAAGAAACTTTATATTACAGGTCATAACGCTATTTTTTCAAGACGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCATCCCGGTTTGgcg < 2:2977667/145‑1 (MQ=255) ccGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGgcg < 1:4183728/150‑1 (MQ=255) cGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGgcgc > 1:772550/1‑150 (MQ=255) tttATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACg > 2:3659662/1‑150 (MQ=255) tttATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACg < 2:3673036/150‑1 (MQ=255) ttATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGt > 2:862655/1‑150 (MQ=255) tataCATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGtt < 2:834101/150‑1 (MQ=255) tataCATTTTGGCTGCAAGAGAGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGtt < 2:4328473/150‑1 (MQ=255) ataCATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGttt < 2:2440513/150‑1 (MQ=255) ataCATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGttt > 2:782089/1‑150 (MQ=255) ataCATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGttt > 1:1545365/1‑150 (MQ=255) taCATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATACATATACCAGCCCGGTTTGGCGCTACGTTTa < 1:170935/150‑1 (MQ=255) aTTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGTTTAAtt > 2:540343/1‑150 (MQ=255) tttGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGTTTAAtttt < 2:2819122/150‑1 (MQ=255) tGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGTTCATAAAGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACAGGCGGGCAGGCTGTGATAAATATACCAGCCCTGTTTGGCGCTACGTTTAATTTTAt > 1:3842706/1‑150 (MQ=255) tGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATCTCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTCCGTTTAATTTTCTGccc > 1:4830916/1‑150 (MQ=255) tGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGTTTAATTTTATGccc > 2:1922369/1‑150 (MQ=255) tGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGTTTAATTTTATGccc < 1:4385448/150‑1 (MQ=255) gCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATCAATATACCAGCCCGGTTTGGCGCTACGTTTAATTTTATGCCCg > 2:1449643/1‑150 (MQ=255) gCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGTTTAATTTTATGCCCg < 1:1076195/150‑1 (MQ=255) gCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGCTTGGCGCTACGTTTAATTTTATGCCCg > 1:449856/1‑150 (MQ=255) aGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGTTTAATTTTATGCCCGTCg > 1:3566480/1‑150 (MQ=255) aGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGTTTAATTTTATGCCCGTCg > 1:3973314/1‑150 (MQ=255) cgcgTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATGCCAGCCCGGTTTGGCGCTACGTTTAATTTTATGCCCGTCGcc > 2:2103427/1‑150 (MQ=255) gcgTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGTTTAATTTTATGCCCGTCGCCa > 2:3480801/1‑150 (MQ=255) tAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTAAGTTTAATTTTATGCCCGTCGCCaaaa > 2:401501/1‑150 (MQ=255) gTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGTTTAATTTTATGCCCGTCGCCAAAATc < 1:1269250/150‑1 (MQ=255) cGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGTTTAATTTTATGCCCGTCGCCAAAATCca > 1:83514/1‑150 (MQ=255) cGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGTTTAATTTTATGCCCGTCGCCAAAATCca < 2:4417046/150‑1 (MQ=255) gaagaaACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGTTTAATTTTATGCCCGTCGCCAAAATCcagc < 1:4892564/150‑1 (MQ=255) gaagaaACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGTTTAATTTTATGCCCGTCGCCAAAATCcagc < 1:1599629/150‑1 (MQ=255) aagaaACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGTTTAATTTTATGCCCGTCGCCAAAATCcagca > 1:1789015/1‑150 (MQ=255) aCTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGTTTAATTTTATGCCCGTCGCCAAAATCCAGCAGCGCa < 2:4462372/150‑1 (MQ=255) tttATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGTTTAATTTTATGCCCGTCGCCAAAATCCAGCAGCGCATc < 1:3139172/150‑1 (MQ=255) tttATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGTTTAATTTTATGCCCGTCGCCAAAATCCAGCAGCGCATc < 1:2299729/150‑1 (MQ=255) ttCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGTTTAATTTTATGCCCGTCGCCAAAATCCAGCAGCGCATCGCCGGt < 1:521674/150‑1 (MQ=255) ttCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGTTTAATTTTATGCCCGTCGCCAAAATCCAGCAGCGCATCGCCGGt > 2:1589873/1‑150 (MQ=255) cAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGTTTAATTTTATGCCCGTCGCCAAAATCCAGCAGCGCATCGCCGGTGat < 1:2446984/150‑1 (MQ=255) gTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGTTTAATTTTATGCCCGTCGCCAAAATCCAGCAGCGCATCGCCGGTGatcat > 2:1869976/1‑150 (MQ=255) tAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGTTTAATTTTATGCCCGTCGCCAAAATCCAGCAGCGCATCGCCGGTGATCATCACg < 1:2818637/150‑1 (MQ=255) aaCGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGTTTAATTTTATGCCCGTCGCCAAAATCCAGCAGCGCATCGCCGGTGATCATCACGt > 1:2919159/1‑150 (MQ=255) aaCGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGTTTAATTTTATGCCCGTCGCCAAAATCCAGCAGCGCATCGCCGGTGATCATCACGt > 2:4741614/1‑150 (MQ=255) aCGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGTTTAATTTTATGCCCGTCGCCAAAATCCAGCAGCGCATCGCCGGTGATCATCACGtt > 1:2619261/1‑150 (MQ=255) | CACAATTCCATATTATTGGTGGTAGATACCCCACCCATGGAAAATTCAGACACCAGGCCATTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCCATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGTTTAATTTTATGCCCGTCGCCAAAATCCAGCAGCGCATCGCCGGTGATCATCACGTTA > CP009273/2122506‑2122799 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |