| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,323,622 | G→T | 17.6% | pseudogene (4260/4605 nt) | yfaS ← | pseudogene, bacterial alpha2‑macroglobulin YfaS variant family; putative membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,323,622 | 0 | G | T | 17.6% | 830.3 / 115.4 | 300 | pseudogene (4260/4605 nt) | yfaS | pseudogene, bacterial alpha2‑macroglobulin YfaS variant family; putative membrane protein |
| Reads supporting (aligned to +/- strand): ref base G (98/149); new base T (25/28); total (123/177) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.57e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.77e-01 | |||||||||||
Only 100 of 304 total aligned reads displayed.
GCTTTTTCCAGCAATTGCCCCTGCTGTTTCGCGGCGTTGGGTTTATTGACCGAAATGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATAAGCCGATACAACTGGCGTTCAACGGTCACCGGAATGTTACTTTGTTGAGCCATTTTTGCC > CP009273/2323473‑2323769 | gctgtgtCCAGCAATTGCCCCTGCTGTTTCGCGGCGTTGGGTTTATTGACCGAAATGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTg < 2:5081164/144‑1 (MQ=255) cTTTTTCCAGCAATTGCCCCTGCTGTTTCGCGGCGTTGGGTTTATTGACCGAAATGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGa < 1:498019/150‑1 (MQ=255) tttttCCAGCAATTGCCCCTGCTGTTTCGCGGCGTTGGGTTTATTGACCGAAATGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGAt < 1:4604409/150‑1 (MQ=255) ttCCAGCAATTGCCCCTGCTGTTTCGCGGCGTTGGGTTTATTGACCGAAATGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTTATTTc < 2:4590583/150‑1 (MQ=255) ttCCAGCAATTGCCCCTGCTGTTTCGCGGCGTTGGGTTTATTGACCGAAATGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTc < 1:1795250/150‑1 (MQ=255) tCCAGCAATTGCCCCTGCTGTTTCGCGGCGTTGGGTTTATTGACCGAAATGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCa > 2:3133798/1‑150 (MQ=255) tCCAGCAATTGCCCCTGCTGTTTCGCGGCGTTGGGTTTATTGACCGAAATGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCa > 2:43837/1‑150 (MQ=255) tCCAGCAATTGCCCCTGCTGTTTCGCGGCGTTGGGTTTATTGACCGAAATGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCa > 1:155678/1‑150 (MQ=255) cAGCAATTGCCCCTGCTGTTTCGCGGCGTTGGGTTTATTGACCGAAATGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATc > 1:5119425/1‑150 (MQ=255) cAATTGCCCCTGCTGTTTCGCGGCGTTGGGTTTATTGACCGAAATGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCgag < 2:1122287/150‑1 (MQ=255) ccTGCTGTTTCGCGGCGTTGGGTTTATTGACCGAAATGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAgcg > 1:1214373/1‑150 (MQ=255) tgctgTTTCGCGGCGTTGGGTTTATTGACCGAAATGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTTATTTCATCGAGATACAGCGCa > 2:466632/1‑150 (MQ=255) tgctgTTTCGCGGCGTTGGGTTTATTGACCGAAATGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCa < 2:1740316/150‑1 (MQ=255) tgctgTTTCGCGGCGTTGGGTTTATTGACCGAAATGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCa > 2:2839616/1‑150 (MQ=255) gctgTTTCGCGGCGTTGGGTTTATTGACCGAAATGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCAt < 2:4989532/150‑1 (MQ=255) gTTTCGCGGCGTTGGGTTTATTGACCGAAATGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTTATTTCATCGAGATACAGCGCATCGc > 1:1768548/1‑150 (MQ=255) tttCGCGGCGTTGGGTTTATTGACCGAAATGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCt < 2:4192301/150‑1 (MQ=255) tttCGCGGCGTTGGGTTTATTGACCGAAATGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCt < 1:4435770/150‑1 (MQ=255) tttCGCGGCGTTGGGTTTATTGACCGAAATGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCt < 1:2995188/150‑1 (MQ=255) tCGCGGCGTTGGGTTTATTGACCGAAATGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGt < 1:4028534/150‑1 (MQ=255) tCGCGGCGTTGGGTTTATTGACCGAAATGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGt < 1:3158092/150‑1 (MQ=255) cgcgGCGTTGGGTTTATTGACCGAAATGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTc > 2:2923491/1‑150 (MQ=255) cgcgGCGTTGGGTTTATTGACCGAAATGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTc < 2:2085343/150‑1 (MQ=255) cggcgTTGGGTTTATTGACCGAAATGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCaa > 1:1009463/1‑150 (MQ=255) gcgTTGGGTTTATTGACCGAAATGCCACATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAAtc > 1:3506547/1‑150 (MQ=255) tGGGTTTATTGACCGAAATGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTTATTTCATCGAGATACAGCGCATCGCTGTCAATCTCAt > 2:4006840/1‑150 (MQ=255) ggTTTATTGACCGAACTGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTg < 2:3278334/150‑1 (MQ=255) ggTTTATTGACCGAAATGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTg < 2:4497066/150‑1 (MQ=255) gTTTATTGACCGAAATGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTTATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGc < 2:4096237/150‑1 (MQ=255) tttATTGACCGAAATGCCCCATGTTGTTCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCt < 1:3670048/150‑1 (MQ=255) tATTGACCGAAATGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTgg > 1:3348823/1‑150 (MQ=255) aTTGACCGAAATGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGt < 1:2712944/150‑1 (MQ=255) tGACCGAAATGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCa < 1:1137015/150‑1 (MQ=255) tGACCGAAATGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCa < 2:4843399/150‑1 (MQ=255) tGACCGAAATGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCa < 2:1352772/150‑1 (MQ=255) aCCGAAATGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTTATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCAca < 1:4231825/150‑2 (MQ=255) aaaTGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTTATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGtt < 2:4339759/150‑1 (MQ=255) aaaTGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGtt < 2:4397349/150‑1 (MQ=255) aaaTGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGtt < 2:89730/150‑1 (MQ=255) aaaTGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGtt < 2:2332029/150‑1 (MQ=255) aaaTGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACAGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTTGTCACCGGtt > 2:4040298/1‑150 (MQ=255) aaTGCCCCCTGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTg < 1:3969917/150‑1 (MQ=255) aaTGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTTATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTg < 2:1221838/150‑1 (MQ=255) tGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCa < 1:4163152/150‑1 (MQ=255) gCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAg > 2:935149/1‑150 (MQ=255) gCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAg > 2:3288905/1‑150 (MQ=255) ccccATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGa < 2:2624648/150‑1 (MQ=255) cATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATa > 1:3308408/1‑150 (MQ=255) tgtgCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCt < 1:1352793/150‑1 (MQ=255) gcgcTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCAt < 1:2493505/150‑1 (MQ=255) gcTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTTATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCAtct > 1:4017521/1‑150 (MQ=255) gcTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCAtct < 1:1254428/150‑1 (MQ=255) gcTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCAtct < 1:2202242/150‑1 (MQ=255) tCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATctct > 1:1091762/1‑150 (MQ=255) gTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTTATTTCATCGAGATACAGCGCATCGCTGTCACTCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCttcttc > 1:3610511/1‑150 (MQ=255) ggCTCCCGGTGGCAGCTGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCAcc < 1:1938803/150‑1 (MQ=255) ggCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCAcc < 2:61965/150‑1 (MQ=255) gCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCa < 1:2617772/150‑1 (MQ=255) gCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCa < 1:1433417/150‑1 (MQ=255) cTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAg > 2:3408962/1‑150 (MQ=255) cccGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAggg > 2:2802040/1‑150 (MQ=255) ccGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGa < 1:2848318/150‑1 (MQ=255) cGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGAt > 1:1536843/1‑150 (MQ=255) cGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGAt < 1:3078389/150‑1 (MQ=255) cGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGAt < 1:2820807/150‑1 (MQ=255) cGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGAt < 2:3662182/150‑1 (MQ=255) ggTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATa < 1:4847809/150‑1 (MQ=255) ggTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATa < 1:511070/150‑1 (MQ=255) tGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATAAg > 2:1430781/1‑150 (MQ=255) ggCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATAAGc < 2:1820097/150‑1 (MQ=255) gCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTTATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATAAGCCGAt < 1:1824274/150‑1 (MQ=255) cGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTTATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATAAGCCGATa > 1:545760/1‑150 (MQ=255) cGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTTATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATAAGCCGATa < 2:2425251/150‑1 (MQ=255) tACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATAAGCCGATACaa < 1:3553572/150‑1 (MQ=255) tCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATAAGCCGATACAACTgg > 1:3331179/1‑150 (MQ=255) ccACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATAAGCCGATACAACTGGc < 2:3165619/150‑1 (MQ=255) cACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTTATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATAAGCCGATACAACTGGCg < 2:1884255/150‑1 (MQ=255) cACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATAAGCCGATACAACTGGCg < 2:985806/150‑1 (MQ=255) cACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATAAGCCGATACAACTGGCg > 2:1247595/1‑150 (MQ=255) cACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATAAGCCGATACAACTGGCg < 1:850753/150‑1 (MQ=255) ccTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATAAGCCGATCCAACTGGCGtt < 2:446832/150‑1 (MQ=255) tGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTTTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATAAGCCGATACAACTGGCGTTCa < 1:1114710/150‑1 (MQ=255) aCCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATAAGCCGATACAACTGGCGTTCAAc > 1:4756822/1‑150 (MQ=255) ccGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATAAGCCGATACAACTGGCGTTCAACg < 1:3435434/150‑1 (MQ=255) tAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTTATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATAAGCCGATACAACTGGCGTTCAACGGTc < 1:1704660/150‑1 (MQ=255) tAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTTATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATAAGCCGATACAACTGGCGTTCAACGGTc < 1:9356/150‑1 (MQ=255) gcgcAGAACTGCATCCTGCTCGCTGGTAAGCGTTATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATAAGCCGATACAACTGGCGTTCAACGGTCAc < 1:3850027/150‑1 (MQ=255) aGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATAAGCCGATACAACTGGCGTTCAACGGTCACCGGa < 2:591417/150‑1 (MQ=255) gAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATAAGCCGATACAACTGGCGTTCAACGGTCACCGGaa > 2:1609605/1‑150 (MQ=255) aTCCTGCTCGCTGGTAAGCGTTATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATAAGCCGATACAACTGGCGTTCAACGGTCACCGGAATGTTACt < 2:807279/150‑1 (MQ=255) cTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATAAGCCGATACAACTGGCGTTCAACGGTCACCGGAATGTTACTttg > 2:518882/1‑150 (MQ=255) cTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATAAGCCGATACAACTGGCGTTCAACGGTCACCGGAATGTTACTttg > 2:2105876/1‑150 (MQ=255) tGCTCGCTGGTAAGCGTTATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATAAGCCGATACAACTGGCGTTCAACGGTCACCGGAATGTTACTttgt > 2:1551801/1‑150 (MQ=255) cTCGCTGGTAAGCGTTATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACAGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATAAGCCGATACAACTGGCGTTCAACGGTCACCGGAATGTTACTttgttg > 2:3732033/1‑150 (MQ=255) cGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATAAGCCGATACAACTGGCGTTCAACGGTCACCGGAATGTTACTTTGTTGAg > 2:4463687/1‑150 (MQ=255) gCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATAAGCCGATACAACTGGCGTTCAACGGTCACCGGAATGTTACTTTGTTGAGc > 1:1302660/1‑150 (MQ=255) tGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATAAGCCGATACAACTGGCGTTCAACGGTCACCGGAATGTTACTTTGTTGAGCCa < 1:3795749/150‑1 (MQ=255) tAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATAAGCCGATACAACTGGCGTTCAACGGTCACCGGAATGTTACTTTGTTGAGCCAttt < 1:3133798/150‑1 (MQ=255) cGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATAAGCCGATACAACTGGCGTTCAACGGTCACCGGAATGTTACTTTGTTGAGCCATTTTTGc > 2:4126212/1‑150 (MQ=255) gTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATAAGCCGATACAACTGGCGTTCAACGGTCACCGGAATGTTACTTTGTTGAGCCATTTTTGcc < 1:2839693/150‑1 (MQ=255) | GCTTTTTCCAGCAATTGCCCCTGCTGTTTCGCGGCGTTGGGTTTATTGACCGAAATGCCCCATGTTGTGCGCTCAACGTCGGCTCCCGGTGGCAGCGGTACTTCCACCTGACCGTAGCGCAGAACTGCATCCTGCTCGCTGGTAAGCGTGATTTCATCGAGATACAGCGCATCGCTGTCAATCTCATTGCTGGTCACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATAAGCCGATACAACTGGCGTTCAACGGTCACCGGAATGTTACTTTGTTGAGCCATTTTTGCC > CP009273/2323473‑2323769 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |