| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,742,155 | C→A | 5.1% | T8K (ACG→AAG) | yfjD → | UPF0053 family inner membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,742,155 | 0 | C | A | 5.1% | 1088.8 / 18.7 | 300 | T8K (ACG→AAG) | yfjD | UPF0053 family inner membrane protein |
| Reads supporting (aligned to +/- strand): ref base C (126/157); new base A (9/8); total (135/165) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.17e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 326 total aligned reads displayed.
ATGAAGGATGGCGTGGACGCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCGACATATGGCGAAACAGGGTAATCGCTCGGCCAAACGCGTCGAAAAATTGCTGCGT > CP009273/2742006‑2742303 | aTGAAGGATGGCGTGGACGCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCtactactac > 2:1824754/1‑150 (MQ=255) aaGGATGGCGTGGACGCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGtt > 1:1074377/1‑150 (MQ=255) aaGGATGGCGTGGACGCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGtt > 1:4657552/1‑150 (MQ=255) aGGATGGCGTGGACGCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTg > 1:1611188/1‑150 (MQ=255) tGGCGTGGACGCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCa > 1:3389102/1‑150 (MQ=255) ggCGTGGACGCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCat > 2:2964766/1‑150 (MQ=255) ggCGTGGACGCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCat > 2:3238224/1‑150 (MQ=255) ggCGTGGACGCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCat < 2:4180972/150‑1 (MQ=255) gCGTGGACGCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCatt < 1:3094957/150‑1 (MQ=255) cGTGGACGCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCatta < 1:3528306/150‑1 (MQ=255) gtcgtcTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGAtcatca < 1:941533/150‑1 (MQ=255) tcgtcTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATcatcat < 2:2325092/150‑1 (MQ=255) tcgtcTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATcatcat < 2:3111223/150‑1 (MQ=255) gtcTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCAtgg > 2:4873413/1‑150 (MQ=255) tcTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCAtggt > 1:507169/1‑150 (MQ=255) cTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCAtggtg < 1:4824612/150‑1 (MQ=255) tGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCAtggtgg < 1:801928/150‑1 (MQ=255) gTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTc > 2:279860/1‑150 (MQ=255) ttAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCAt > 1:4293660/1‑150 (MQ=255) ttAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCAt > 2:4726066/1‑150 (MQ=255) ttAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCAt > 2:5088806/1‑150 (MQ=255) tAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCAtt < 2:4897878/150‑1 (MQ=255) aaCGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCAttt < 1:2714831/150‑1 (MQ=255) aCGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTc < 2:376302/150‑1 (MQ=255) cGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCa < 2:518597/150‑1 (MQ=255) gCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTAAGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCt < 2:4092207/150‑1 (MQ=255) cGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTa < 1:2497182/150‑1 (MQ=255) cGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTa > 1:4397303/1‑150 (MQ=255) gggCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTAt < 2:3656090/150‑1 (MQ=255) ggacgcgGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTAt < 1:1729984/147‑1 (MQ=255) ggCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTAtt < 1:2297940/150‑1 (MQ=255) cgcgGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTAtttt > 2:2211012/1‑150 (MQ=255) cgGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTc > 2:2480876/1‑150 (MQ=255) ggTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTcc < 1:1832051/150‑1 (MQ=255) ggTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTcc > 1:2756973/1‑150 (MQ=255) ggTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTcc > 2:54217/1‑150 (MQ=255) gTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTAAGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCg < 1:3944913/150‑1 (MQ=255) aTTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGt > 2:3968131/1‑150 (MQ=255) tCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTAAGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTcc > 1:1520975/1‑150 (MQ=255) cTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCg < 2:3897758/150‑1 (MQ=255) cTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCg > 2:1118551/1‑150 (MQ=255) cTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCg < 2:2405104/150‑1 (MQ=255) acTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAAcc < 1:3181038/150‑1 (MQ=255) cTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCg < 2:4553484/150‑1 (MQ=255) tGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCgg < 2:2535607/150‑1 (MQ=255) ggCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGa < 2:935821/150‑1 (MQ=255) gCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGaa < 2:8576/150‑1 (MQ=255) gCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGaa < 2:3353073/150‑1 (MQ=255) ccTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTAAGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAat < 2:504020/150‑1 (MQ=255) tACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAatga < 1:1118551/150‑1 (MQ=255) aCTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGActgat > 1:3259033/1‑150 (MQ=255) tCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGAc < 1:2476850/150‑1 (MQ=255) tCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGAc < 1:5125068/150‑1 (MQ=255) tCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGAc > 2:3542556/1‑150 (MQ=255) ggCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGAccc < 1:404659/150‑1 (MQ=255) ggCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGAccc > 2:837492/1‑150 (MQ=255) gCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCt < 2:1285693/150‑1 (MQ=255) gCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCt < 1:2763327/150‑1 (MQ=255) cGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAAcc > 1:3856626/1‑150 (MQ=255) gAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCg > 2:4234822/1‑150 (MQ=255) gAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCg < 2:3214292/150‑1 (MQ=255) gAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCg < 2:535369/150‑1 (MQ=255) tGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTA‑TTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATc < 1:973586/150‑1 (MQ=255) gTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATc < 1:301476/150‑1 (MQ=255) tCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCg < 2:2111849/150‑1 (MQ=255) cagcagTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTc < 1:2565474/150‑1 (MQ=255) agTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCg < 1:4201147/150‑1 (MQ=255) ttAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCGAc > 2:476381/1‑150 (MQ=255) aaTCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCGACat < 1:1958476/150‑1 (MQ=255) aTCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCGACata < 1:4498300/150‑1 (MQ=255) aGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTAAGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCGACATATgg > 2:2279161/1‑150 (MQ=255) cccAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCGACATATGGCGAAACa > 2:2498487/1‑150 (MQ=255) cccAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCGACATATGGCGAAACa < 1:1388734/150‑1 (MQ=255) cAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCGACATATGGCGAAACAgg > 2:2806676/1‑150 (MQ=255) cAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCGACATATGGCGAAACAgg > 2:4657042/1‑150 (MQ=255) aGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCGACATATGGCGAAACAggg < 1:903793/150‑1 (MQ=255) aGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCGACATATGGCGAAACAggg > 1:1808717/1‑150 (MQ=255) aGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCGACATATGGCGAAACAggg < 2:1611188/150‑1 (MQ=255) gAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCGACATATGGCGAAACAGGGt < 2:4034053/150‑1 (MQ=255) aaaaGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCGACATATGGCGAAACAGGGTa < 2:502581/150‑1 (MQ=255) aaaaGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCGACATATGGCGAAACAGGGTa < 2:205965/150‑1 (MQ=255) aaaGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCGACATATGGCGAAACAGGGTaa < 2:4466270/150‑1 (MQ=255) aGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCGACATATGGCGAAACAGGGTAATc < 1:2343146/150‑1 (MQ=255) aGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCGACATATGGCGAAACAGGGTAATc > 1:10342/1‑150 (MQ=255) ggAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCGACATATGGCGAAACAGGGTAATCg > 1:119030/1‑150 (MQ=255) gAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCGACATATGGCGAAACAGGGTAATCGc > 1:2061210/1‑150 (MQ=255) gTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCGACATATGGCGAAACAGGGTAATCGCTc < 2:147729/150‑1 (MQ=255) gTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCGACATATGGCGAAACAGCGTAATCGCTc > 1:2649442/1‑150 (MQ=255) ttCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCGACATATGGCGAAACAGGGTAATCGCTCgg > 1:3723849/1‑150 (MQ=255) ggAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCGACATATGGCGAAACAGGGTAATCGCTCGGCCAAAcg > 2:686934/1‑150 (MQ=255) gAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCGACATATGGCGAAACAGGGTAATCGCTCGGCCAAAcgc < 1:68520/150‑1 (MQ=255) aaCACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCGACATATGGCGAAACAGGGTAATCGCTCGGCCAAAcgcg < 1:3650971/150‑1 (MQ=255) cacaTTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCGACATATGGCGAAACAGGGTAATCGCTCGGCCAAACGCGTc < 1:5037236/150‑1 (MQ=255) acaTTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCGACATATGGCGAAACAGGGTAATCGCTCGGCCAAACGCGTCg > 2:2865238/1‑150 (MQ=255) ttCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCGACATATGGCGAAACAGGGTAATCGCTCGGCCAAACGCGTCGaaaa < 2:2049450/150‑1 (MQ=255) tCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCGACATATGGCGAAACAGGGTAATCGCTCGGCCAAACGCGTCGaaaaa > 1:2725179/1‑150 (MQ=255) tactactacGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCGACATATGGCGAAACAGGGTAATCGCTCGGCCAAACGCGTCGAAAAAtt > 2:1486071/1‑150 (MQ=255) actactacGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCGACATATGGCGAAACAGGGTAATCGCTCGGCCAAACGCGTCGAAAAATtg < 1:4157154/150‑1 (MQ=255) actacGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCGACATATGGCGAAACAGGGTAATCGCTCGGCCAAACGCGTCGAAAAATtgcta < 2:2718414/150‑2 (MQ=255) tacGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCGACATATGGCGAAACAGGGTAATCGCTCGGCCAAACGCGTCGAAAAATTGCTGCg > 1:4262275/1‑150 (MQ=255) | ATGAAGGATGGCGTGGACGCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCGACATATGGCGAAACAGGGTAATCGCTCGGCCAAACGCGTCGAAAAATTGCTGCGT > CP009273/2742006‑2742303 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |