| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,798,195 | A→T | 100% | K8* (AAA→TAA) | proV → | glycine betaine transporter subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,798,195 | 0 | A | T | 96.5% | 746.0 / 11.2 | 230 | K8* (AAA→TAA) | proV | glycine betaine transporter subunit |
| Reads supporting (aligned to +/- strand): ref base A (5/3); new base T (120/102); total (125/105) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.30e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.48e-01 | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 232 total aligned reads displayed.
TCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATA > CP009273/2798048‑2798341 | tCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATTtaa < 1:222346/150‑1 (MQ=255) cAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATTtaaa > 2:4471290/1‑150 (MQ=255) cATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTta < 2:1660864/150‑1 (MQ=255) aTGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTtat < 1:3204067/150‑1 (MQ=255) aTGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTtat > 1:3834151/1‑150 (MQ=255) tGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTtata > 2:1570218/1‑150 (MQ=255) gCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATaa < 2:3210692/150‑1 (MQ=255) aTTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTTGGTAATATATCGACATAGACAAATAAAGGAATCTGTCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAatat > 1:3743031/1‑150 (MQ=255) aTTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAatat > 1:3713571/1‑150 (MQ=255) tttGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATAtt > 1:3329041/1‑150 (MQ=255) ttGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATAttt < 1:3529067/150‑1 (MQ=255) ttGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATAttt > 1:1601766/1‑150 (MQ=255) ttGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCAATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATAttt > 2:2482614/1‑150 (MQ=255) tGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATATTTg > 1:2400052/1‑150 (MQ=255) gCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATATTTgg < 2:3776228/150‑1 (MQ=255) gCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATATTTgg > 2:2131896/1‑150 (MQ=255) aTCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGa < 1:3572599/150‑1 (MQ=255) aTCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGa > 1:764826/1‑150 (MQ=255) aGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCa < 1:1206559/150‑1 (MQ=255) tttGCCTCAGATTCTCAGTATGTTAGTTTAGATTAAAGTTTCTATTTACATTGGGTAATATATCGACATAGAGAAATTTAGGAATCTTTCTATTGGATTGAAATT‑AAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCca < 1:4104960/149‑1 (MQ=255) ttGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGAAATT‑AAATTAGAAATATAAAATATTTATAAAATATTTGGCGAGCATCcac > 1:5074046/1‑150 (MQ=255) tCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACagcga < 2:3183836/150‑1 (MQ=255) aGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACagcgagc < 2:2816162/150‑1 (MQ=255) aGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACagcgagc > 1:4987733/1‑150 (MQ=255) aGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACagcgagc > 1:1580144/1‑150 (MQ=255) ttCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGtt > 2:4048340/1‑150 (MQ=255) ttCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGtt > 2:3912090/1‑150 (MQ=255) ctcAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCa < 2:2264406/150‑1 (MQ=255) tcAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCaa > 1:436547/1‑150 (MQ=255) cAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCaaa > 2:4796138/1‑150 (MQ=255) attATGTTAGTGTAGAAAAAAGTGACTATTTCCATTTGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAat < 1:3596091/148‑1 (MQ=255) aGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAat > 2:615862/1‑150 (MQ=255) aGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAat > 1:41364/1‑150 (MQ=255) gTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAata > 2:3370908/1‑150 (MQ=255) tATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAatat > 1:1901379/1‑150 (MQ=255) gTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATc < 2:3691647/150‑1 (MQ=255) gTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATc < 2:2764406/150‑1 (MQ=255) gggTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAAc < 1:2522255/150‑1 (MQ=255) gggTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAAc < 2:1874022/150‑1 (MQ=255) ggTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACa < 2:1018420/150‑1 (MQ=255) gTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACaa > 2:3013041/1‑150 (MQ=255) atAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGTAATATTTCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATATTTGTCGAGCATACACATCGAGCGTTCAAATATATCTAACaa > 2:3012970/2‑150 (MQ=255) aGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAgg > 1:3811546/1‑150 (MQ=255) aGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAgg < 1:4974176/150‑1 (MQ=255) gAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGa > 1:1137577/1‑150 (MQ=255) aaaaaGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATATAAAATCTTTATAAAATATTTGGAGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACt > 1:3513153/1‑150 (MQ=255) aaaGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACttt > 1:2581450/1‑150 (MQ=255) aaaGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACttt > 2:4879114/1‑150 (MQ=255) tGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCaaa < 1:666158/150‑1 (MQ=255) cTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGa > 2:214121/1‑150 (MQ=255) aTTTACATTGGTTAATATATAGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAAc < 1:3501821/150‑1 (MQ=255) tCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACaaa > 1:2982820/1‑150 (MQ=255) tCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACaaa > 1:4914160/1‑150 (MQ=255) tCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACaaa < 2:1030555/150‑1 (MQ=255) ccATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAAt > 2:341519/1‑150 (MQ=255) cATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAAtt < 1:812772/150‑1 (MQ=255) aTTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTc > 2:102693/1‑150 (MQ=255) ggTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGa > 2:1630847/1‑150 (MQ=255) atatCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAAc < 2:2780935/150‑1 (MQ=255) tataGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACt < 1:2638029/150‑1 (MQ=255) cGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTggg < 1:2687982/150‑1 (MQ=255) cGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTggg < 1:91360/150‑1 (MQ=255) cGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTggg > 2:1146468/1‑150 (MQ=255) cGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTggg > 2:1146136/1‑150 (MQ=255) gACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGc > 1:4736928/1‑150 (MQ=255) gACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGc > 1:1085007/1‑150 (MQ=255) gACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGc < 2:3792957/150‑1 (MQ=255) aCATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCt > 2:2883319/1‑150 (MQ=255) cATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTa < 1:440404/150‑1 (MQ=255) tAGACAAATAAAGGAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAACATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATc < 2:1839422/150‑1 (MQ=255) aCAAATAAAGGAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCt < 1:316667/150‑1 (MQ=255) cAAATAAAGGAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCtt > 1:2964466/1‑150 (MQ=255) aaTAAAGGAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTgg < 1:825344/150‑1 (MQ=255) aTAAAGGAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGc < 1:1285455/150‑1 (MQ=255) tAAAGGAATCTTTCTATTGCATGGCAATTAAAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGc < 1:1492227/150‑1 (MQ=255) tAAAGGAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCg < 1:180528/150‑1 (MQ=255) aGGAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTaa > 2:2044561/1‑150 (MQ=255) ggAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTaaa > 2:2699922/1‑150 (MQ=255) tttCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACGc < 1:2051090/150‑1 (MQ=255) ttCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACGcc < 1:4864878/150‑1 (MQ=255) ttCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACGcc < 2:576155/150‑1 (MQ=255) tCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACGCCa > 2:438562/1‑150 (MQ=255) tCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACGCCa > 2:721297/1‑150 (MQ=255) tCTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACGCCa < 2:1269270/150‑1 (MQ=255) cTATTGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACGCCAg < 1:2140274/150‑1 (MQ=255) tGCATGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACGCCAGTCTg > 2:1134009/1‑150 (MQ=255) aTGGCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACGCCAGTCTGGcc < 1:4471290/150‑1 (MQ=255) ggCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACGCCAGTCTGGCCAt > 2:3721903/1‑150 (MQ=255) gCAATT‑AAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACGCCAGTCTGGCCAtt < 2:4700287/150‑1 (MQ=255) cAATT‑AAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGGAAAAACTGGGCTATCGCTTGGCGTAAAAGACGCCAGTCTGGCCATTg > 2:1492739/1‑150 (MQ=255) cAATT‑AAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACGCCGGTCTGGCCATTg > 2:1317972/1‑150 (MQ=255) aatt‑aaattaGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACATGGACTTTCAAAAGAACAATTTCTGGAAATAACTGGGCTATCGCATGTCGTAATAGACGCCAGGCTGGCCATGga > 2:2927002/1‑150 (MQ=255) aatt‑aaattaGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACGCCAGTCTGGCCATTga < 1:3925397/150‑1 (MQ=255) tt‑aaattaGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACGCCAGTCTGGCCATTgaag < 1:602858/150‑1 (MQ=255) aaattaGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACGCCAGTCTGGCCATTgaagaa < 2:41364/150‑1 (MQ=255) aattaGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACGCCAGTCTGGCCATTGaagaag > 1:4239286/1‑150 (MQ=255) aattaGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCAAAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACGCCAGTCTGGCCATTGaagaag > 2:3551757/1‑150 (MQ=255) taGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACGCCAGTCTGGCCATTGAAGAAGGCg < 2:298611/150‑1 (MQ=255) aGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACGCCAGTCTGGCCATTGAAGAAGGCga < 2:1601766/150‑1 (MQ=255) aTTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGata < 2:3096772/150‑1 (MQ=255) | TCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATT‑AAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATA > CP009273/2798048‑2798341 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |