| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,844,024 | T→A | 81.2% | C7S (TGC→AGC) | hypA → | protein involved in nickel insertion into hydrogenases 3 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,844,024 | 0 | T | A | 81.2% | 755.9 / 163.6 | 313 | C7S (TGC→AGC) | hypA | protein involved in nickel insertion into hydrogenases 3 |
| Reads supporting (aligned to +/- strand): ref base T (32/27); new base A (120/134); total (152/161) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.86e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.78e-01 | |||||||||||
Only 100 of 314 total aligned reads displayed.
TTAAGCTAAAGATGAATTTCGTCGCCGTGTCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCTGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAACCAGCTCTCTTGCCTTTTGTTTTGATCTGGTTTGCCGCGGCAGC > CP009273/2843877‑2844170 | ttAAGCTAAAGATGAATTTCGTCGCCGTGTCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGc > 1:3172757/1‑150 (MQ=255) tAAGCTAAAGATGAATTTCGTCGCCGTGTCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGcc < 1:675083/150‑1 (MQ=255) tAAGCTAAAGATGAATTTCGTCGCCGTGTCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGcc > 1:4238883/1‑150 (MQ=255) aaGCTAAAGATGAATTTCGTCGCCGTGTCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCa < 1:3370395/150‑1 (MQ=255) gCTAAAGATGAATTTCGTCGCCGTGTCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAAc > 2:1029564/1‑150 (MQ=255) cTAAAGATGAATTTCGTCGCCGTGTCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACg < 1:2268790/150‑1 (MQ=255) aaaGATGAATTTCGTCGCCGTGTCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACggg < 2:2986684/150‑1 (MQ=255) aGATGAATTTCGTCGCCGTGTCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCa < 1:954527/150‑1 (MQ=255) aTGAATTTCGTCGCCGTGTCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACt < 2:828362/150‑1 (MQ=255) aTGAATTTCGTCGCCGTGTCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACt < 2:1659248/150‑1 (MQ=255) tGAATTTCGTCGCCGTGTCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTg > 2:4929549/1‑150 (MQ=255) tGAATTTCGTCGCCGTGTCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTg > 2:1214791/1‑150 (MQ=255) tGAATTTCGTCGCCGTGTCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTg > 2:2142633/1‑150 (MQ=255) aaTTTCGTCGCCGTGTCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGa < 1:2397833/150‑1 (MQ=255) tttCGTCGCCGTGTCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAAt > 2:2633328/1‑150 (MQ=255) ttCGTCGCCGTGTCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAAtt < 1:616616/150‑1 (MQ=255) tcgtcgCCGTGTCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCTGCCAACGGGCACTGGAATTg < 2:2560671/150‑1 (MQ=255) gtcgCCGTGTCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGAt < 1:2961457/150‑1 (MQ=255) tcgCCGTGTCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATc > 1:4309159/1‑150 (MQ=255) cGTGTCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAAc < 1:4392533/150‑1 (MQ=255) gtgtCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCGTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAAca > 2:3507560/1‑150 (MQ=255) tgtCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAAcag < 2:2361391/150‑1 (MQ=255) gtCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCTGCCAACGGGCACTGGAATTGATCGAAcagc > 1:4755532/1‑150 (MQ=255) gtCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAAcagc < 2:4291644/150‑1 (MQ=255) tCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAAcagca < 2:1900836/150‑1 (MQ=255) gACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAgg < 1:1292475/150‑1 (MQ=255) gtgtCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCg < 2:4525346/150‑1 (MQ=255) gtgtCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCg > 2:4970375/1‑150 (MQ=255) cATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCaaa > 1:4025751/1‑150 (MQ=255) aTTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCaaaa < 2:378214/150‑1 (MQ=255) tttCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCAAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAac > 2:2677041/1‑150 (MQ=255) ttCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAaca < 1:2391152/150‑1 (MQ=255) tCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCTGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAacac > 1:3739009/1‑150 (MQ=255) tCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAacac > 1:2041375/1‑150 (MQ=255) cGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACg < 1:3722827/150‑1 (MQ=255) gACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACgg < 2:898106/150‑1 (MQ=255) catcatCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGgcg > 1:1215788/1‑150 (MQ=255) atcatcGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGgcgc > 2:2843431/1‑150 (MQ=255) tcatcGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCa > 1:2551346/1‑150 (MQ=255) catcGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCTGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCaa > 1:639636/1‑150 (MQ=255) tcGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCaaaa > 2:4357645/1‑150 (MQ=255) cGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAAc < 2:247807/150‑1 (MQ=255) cATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAAcgcg > 1:3115369/1‑150 (MQ=255) ccGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTgggg > 2:2510993/1‑150 (MQ=255) cGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCTGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGt < 1:4869701/150‑1 (MQ=255) aGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACCCGGCGCAAAACGCGTAACTGGGGTCTg < 2:1321495/150‑1 (MQ=255) ggATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCTGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGc > 1:4162934/1‑150 (MQ=255) aTAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTc > 2:2531736/1‑150 (MQ=255) aTAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTc > 2:4992936/1‑150 (MQ=255) tAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCa > 1:364614/1‑150 (MQ=255) aaTCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCTGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCaa < 2:4857254/150‑1 (MQ=255) tCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCaaaa < 1:884761/150‑1 (MQ=255) aaCACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCTGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAAtt > 1:1420106/1‑150 (MQ=255) aaCACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAAtt > 1:1516743/1‑150 (MQ=255) cacTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTgg < 1:4471706/150‑1 (MQ=255) acTGGCACAATTATTGCCTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCTGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGgc < 2:1833598/150‑1 (MQ=255) tGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGgcgc > 2:4188009/1‑150 (MQ=255) attattGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCTGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCt < 2:4755532/150‑1 (MQ=255) ttattGCTTGTAGCTGTCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCtt < 2:4511774/150‑1 (MQ=255) attGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCTGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTtgt > 2:3883272/1‑150 (MQ=255) attGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTtgt < 2:1948818/150‑1 (MQ=255) ttGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTtgtg > 1:3798191/1‑150 (MQ=255) tGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTgtgt > 2:3436911/1‑150 (MQ=255) tAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAAc > 2:2051843/1‑150 (MQ=255) tAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAAc > 2:2265164/1‑150 (MQ=255) aGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCACAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAAcc > 1:4001348/1‑150 (MQ=255) aGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAAcc > 2:1706436/1‑150 (MQ=255) gCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAACCa < 1:1240760/150‑1 (MQ=255) cTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAACCAg < 2:3211439/150‑1 (MQ=255) cTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAACCAg < 1:803807/150‑1 (MQ=255) gCAATAGTTACTGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAACCAGctc < 2:583867/150‑1 (MQ=255) gCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAACCAGctc > 1:3903103/1‑150 (MQ=255) cAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCTGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAACCAGctct < 2:1465199/150‑1 (MQ=255) aTAGTTAATGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAACCAGctctct < 1:28129/150‑1 (MQ=255) aGTTAATGGGAGGCGATATGCACGAAATAACCCTCTGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAACCAGCTCTCTTg > 2:435742/1‑150 (MQ=255) aaTGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAACCAGCTCTCTTGCCtt > 2:1492941/1‑150 (MQ=255) tGGGAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAACCAGCTCTCTTGCCtttt > 1:1076055/1‑150 (MQ=255) gggAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAACCAGCTCTCTTGCCttttg > 1:746123/1‑150 (MQ=255) ggAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAACCAGCTCTCTTGCCttttgt > 1:540882/1‑150 (MQ=255) gAGGCGATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAACCAGCTCTCTTGCCttttgtt < 2:3327397/150‑1 (MQ=255) gATATGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAACCAGCTCTCTTGCCTTTTGTTTTGAt > 1:2239259/1‑150 (MQ=255) atatGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCACAACGCGTAACTGGTGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAACCAGCTCTCTTGCCTTTTGTTTTGATc > 1:181814/1‑150 (MQ=255) tatGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAACCAGCTCTCTTGCCTTTTGTTTTGATCt < 1:2514919/150‑1 (MQ=255) atGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAACCAGCTCTCTTGCCTTTTGTTTTGATCTg < 2:4238883/150‑1 (MQ=255) atGCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAACCAGCTCTCTTGCCTTTTGTTTTGATCTg < 1:1867169/150‑1 (MQ=255) gCACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAACCAGCTCTCTTGCCTTTTGTTTTGATCTGGt < 2:4343825/150‑1 (MQ=255) cACGAAATAACCCTCTGCCAACGGGCACTGGAATTGCTCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAACCAGCTCTCTTGCCTTTTGTTTTGATCTGGtt > 2:5087913/1‑150 (MQ=255) cACGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAACCAGCTCTCTTGCCTGTTGTTTTGATCTGGtt > 2:3116579/1‑150 (MQ=255) cACGAAAGAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAACCAGCTCTCTTGCCTTTTGTTTTGATCTGGtt < 2:4096289/150‑1 (MQ=255) aCGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAACCAGCTCTCTTGCCTTTTGTTTTGATCTGGttt < 1:499025/150‑1 (MQ=255) aCGAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAACCAGCTCTCTTGCCTTTTGTTTTGATCTGGttt < 2:3743355/150‑1 (MQ=255) gAAATAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAACCAGCTCTCTTGCCTTTTGTTTTGATCTGGTTTGc > 2:3304705/1‑150 (MQ=255) aaaTAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAACCAGCTCTCTTGCCTTTTGTTTTGATCTGGTTTGcc < 1:1625601/150‑1 (MQ=255) aaTAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAACCAGCTCTCTTGCCTTTTGTTTTGATCTGGTTTGCcg < 1:1029523/150‑1 (MQ=255) aTAACCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAACCAGCTCTCTTGCCTTTTGTTTTGATCTGGTTTGCcgc < 2:1364819/150‑1 (MQ=255) aaCCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAACCAGCTCTCTTGCCTTTTGTTTTGATCTGGTTTGCCGCgg < 1:3492193/150‑1 (MQ=255) aCCCTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAACCAGCTCTCTTGCCTTTTGTTTTGATCTGGTTTGCCGCGGc < 1:2663407/150‑1 (MQ=255) cccTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAACCAGCTCTCTTGCCTTTTGTTTTGATCTGGTTTGCCGCGGCa > 2:1605480/1‑150 (MQ=255) ccTCAGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAACCAGCTCTCTTGCCTTTTGTTTTGATCTGGTTTGCCGCGGCAg > 2:1446622/1‑150 (MQ=255) ctctGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAACCAGCTCTCTTGCCTTTTGTTTTGATCTGGTTTGCCGCGGCAGc < 2:1181146/150‑1 (MQ=255) | TTAAGCTAAAGATGAATTTCGTCGCCGTGTCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCTGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAACCAGCTCTCTTGCCTTTTGTTTTGATCTGGTTTGCCGCGGCAGC > CP009273/2843877‑2844170 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |