| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,973,968 | T→A | 72.3% | G9G (GGA→GGT) | ygeA ← | Asp/Glu_racemase family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,973,968 | 0 | T | A | 72.3% | 479.3 / 229.5 | 288 | G9G (GGA→GGT) | ygeA | Asp/Glu_racemase family protein |
| Reads supporting (aligned to +/- strand): ref base T (41/38); new base A (100/107); total (141/147) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.99e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.02e-01 | |||||||||||
Only 100 of 292 total aligned reads displayed.
TATCCCATTCCCCGCGACGCTGGCACTCTTCTATTTCATGAAAATCGACGCTATGTAGCAGCACTTGCGCAGAGTGAAGCCCACCAAGCCGCTGTTTAATGCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATTCCCAGCTCATTCCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGG > CP009273/2973820‑2974113 | tagcgcATTCCGCGCGTCGCTGGCACTCTTCTTTTTCTTTATTATCGACGCTTTGTAGCAGCACTTGCGCTGAGTGAAGCCCACCTAGCCGGTGTTTATTGCCTTCATTTATCATTCGAGAGTTTGGAATGGTGGATTCCCAGCTCATtc < 2:3279218/145‑1 (MQ=255) aTCCCATTCCCCGCGACGCTGGCACTCTTCTATTTCATGAAAATCGACGCTATGTAGCAGCACTTGCGCAGAGTGAAGCCCACCAAGCCGCTGTTTAATGCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATTCCCAGCTCATacc < 1:1225181/150‑1 (MQ=255) cATTCCCCGCGACGCTGGCACTCTTCTATTTCATGAAAATCGACGCTATGTAGCAGCACTTGCGCAGAGTGAAGCCCACCAAGCCGCTGTTTAATGCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATTCCCAGCTCATACCTccc > 1:3094469/1‑150 (MQ=255) aTTCCCCGCGACGCTGGCACTCTTCTATTTCATGAAAATCGACGCTATGTAGCAGCACTTGCGCAGAGTGAAGCCCACCAAGCCGCTGTTTAATGCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATTCCCAGCTCATACCTCCCa > 2:1546360/1‑150 (MQ=255) aTTCCCCGCGACGCTGGCACTCTTCTATTTCATGAAAATCGACGCTATGTAGCAGCACTTGCGCAGAGTGAAGCCCACCAAGCCGCTGTTTAATGCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATTCCCAGCTCATACCTCCCa > 2:5013250/1‑150 (MQ=255) tCCCCGCGACGCTGGCACTCTTCTATTTCATGAAAATCGACGCTATGTAGCAGCACTTGCGCAGAGTGAAGCCCACCAAGCCGCTGTTTAATGCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATTCCCAGCTCATTCCTCCCAGc > 1:2020354/1‑150 (MQ=255) tCCCCGCGACGCTGGCACTCTTCTATTTCATGAAAATCGACGCTATGTAGCAGCACTTGCGCAGAGTGAAGCCCACCAAGCCGCTGTTTAATGCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATTCCCAGCTCATACCTCCCAGc > 1:250775/1‑150 (MQ=255) ccccGCGACGCTGGCACTCTTCTATTTCATGAAAATCGACGCTATGTAGCAGCACTTGCGCAGAGTGAAGCCCACCAAGCCGCTGTTTAATGCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATTCCCAGCTCATTCCTCCCAGCa > 2:510153/1‑150 (MQ=255) ccccGCGACGCTGGCACTCTTCTATTTCATGAAAATCGACGCTATGTAGCAGCACTTGCGCAGAGTGAAGCCCACCAAGCCGCTGTTTAATGCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATTCCCAGCTCATACCTCCCAGCa > 1:3060443/1‑150 (MQ=255) gcgACGCTGTCTCTATTCTTTTTCATGAAAATAGACGCTATGTAGCAGCACTTGCGCAGAGTGAAGCCCACCAAGCCGCTGTTTAATGCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATTCCCAGCTCATACCTCCCAGCAAAcc < 1:3901458/150‑1 (MQ=255) cgACGCTGGCACTCTTCTATTTCATGAAAATCGACGCTATGTAGCAGCACTTGCGCAGAGTGAAGCCCACCAAGCCGCTGTTTAATGCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATTCCCAGCTCATTCCTCCCAGCAAACCa > 1:4119330/1‑150 (MQ=255) cgACGCTGGCACTCTTCTATTTCATGAAAATCGACGCTATGTAGCAGCACTTGCGCAGAGTGAAGCCCACCAAGCCGCTGTTTAATGCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATTCCCAGCTCATACCTCCCAGCAAACCa < 2:420627/150‑1 (MQ=255) gACGCTGGCACTCTTCTATTTCATGAAAATCGACGCTATGTAGCAGCACTTGCGCAGAGTGAAGCCCACCAAGCCGCTGTTTAATGCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATTCCCAGCTCATACCTCCCAGCAAACCaa > 2:299441/1‑150 (MQ=255) gACGCTGGCACTCTTCTATTTCATGAAAATCGACGCTATGTAGCAGCACTTGCGCAGAGTGAAGCCCACCAAGCCGCTGTTTAATGCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATTCCCAGCTCATACCTCCCAGCAAACCaa > 2:3665845/1‑150 (MQ=255) cTGGCACTCTTCTATTTCATGAAAATCGACGCTATGTAGCAGCACTTGCGCAGAGTGAAGCCCACCAAGCCGCTGTTTAATGCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATTCCCAGCTCATACCTCCCAGCAAACCAATTGt < 2:4306717/150‑1 (MQ=255) ggCACTCTTCTATTTCATGAAAATCGACGCTATGTAGCAGCACTTGCGCAGAGTGAAGCCCACCAAGCCGCTGTTTAATGCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATTCCCAGCTCATTCCTCCCAGCAAACCAATTGttt < 1:622758/150‑1 (MQ=255) ggCACTCTTCTATTTCATGAAAATCGACGCTATGTAGCAGCACTTGCGCAGAGTGAAGCCCACCAAGCCGCTGTTTAATGCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATTCCCAGCTCATACCTCCCAGCAAACCAATTGttt > 2:1085210/1‑150 (MQ=255) ggCACTCTTCTATTTCATGAAAATCGACGCTATGTAGCAGCACTTGCGCAGAGTGAAGCCCACCAAGCCGCTGTTTAATGCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATTCCCAGCTCATACCTCCCAGCAAACCAATTGttt < 2:3801480/150‑1 (MQ=255) gCACTCTTCTATTTCATGAAAATCGACGCTATGTAGCAGCACTTGCGCAGAGTGAAGCCCACCAAGCCGCTGTTTAATGCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATTCCCAGCTCATTCCTCCCAGCAAACCAATTGtttt < 2:1187137/150‑1 (MQ=255) gCACTCTTCTATTTCATGAAAATCGACGCTATGTAGCAGCACTTGCGCAGAGTGAAGCCCACCAAGCCGCTGTTTAATGCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATTCCCAGCTCATACCTCCCAGCAAACCAATTGtttt < 1:4284432/150‑1 (MQ=255) cACTCTTCTATTTCATGAAAATCGACGCTATGTAGCAGCACTTGCGCAGAGTGAAGCCCACCAAGCCGCTGTTTAATGCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATTCCCAGCTCATTCCTCCCAGCAAACCAATTGTTTTc > 1:1624839/1‑150 (MQ=255) aCTCTTCTATTTCATGAAAATCGACGCTATGTAGCAGCACTTGCGCAGAGTGAAGCCCACCAAGCCGCTGTTTAATGCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATTCCCAGCTCATACCTCCCAGCAAACCAATTGTTTTCa > 1:202889/1‑150 (MQ=255) ctctTCTATTTCATGAAAATCGACGCTATGTAGCAGCACTTGCGCAGAGTGAAGCCCACCAAGCCGCTGTTTAATGCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATTCCCAGCTCATACCTCCCAGCAAACCAATTGTTTTCAt < 1:3671053/150‑1 (MQ=255) tcttctATTTCATGAAAATCGACGCTATGTAGCAGCACTTGCGCAGAGTGAAGCCCACCAAGCCGCTGTTTAATGCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATTCCCAGCTCATACCTCCCAGCAAACCAATTGTTTTCAtt > 2:3056242/1‑150 (MQ=255) tATTTCATGAAAATCGACGCTATGTAGCAGCACTTGCGCAGAGTGAAGCCCACCAAGCCGCTGTTTAATGCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATTCCCAGCTCATACCTCCCAGCAAACCAATTGTTTTCATTCctct < 1:1514955/150‑1 (MQ=255) tATTTCATGAAAATCGACGCTATGTAGCAGCACTTGCGCAGAGTGAAGCCCACCAAGCCGCTGTTTAATGCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATTCCCAGCTCATACCTCCCAGCAAACCAATTGTTTTCATTCctct < 1:3354589/150‑1 (MQ=255) ttCATGAAAATCGACGCTATGTAGCAGCACTTGCGCAGAGTGAAGCCCACCAAGCCGCTGTTTAATGCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATTCCCAGCTCATACCTCCCAGCAAACCAATTGTTTTCATTCCtctctc < 2:278640/150‑1 (MQ=255) caagAAAATCGACGCTATGTAGCAGCACTTGCGCAGAGTGAAGCCCACCAAGCCGATGTTTAATGCCTTCATTTATCAAACGATAGTAAGGACTGGTGGATTCCCAGCTCATTCCTCCAAGCAAACAAATTTTTGTAAATACTCTATCCt > 2:2654872/4‑150 (MQ=255) gAAAATCGACGCTATGTAGCAGCACTTGCGCAGAGTGAAGCCCACCAAGCCGCTGTTTAATGCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATTCCCAGCTCATACCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGAt < 2:4782612/150‑1 (MQ=255) aaaaTCGACGCTATGTAGCAGCACTTGCGCAGAGTGAAGCCCACCAAGCCGCTGTTTAATGCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATTCCCAGCTCATACCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGAtg < 2:3560193/150‑1 (MQ=255) aaaaTCGACGCTATGTAGCAGCACTTGCGCAGAGTGAAGCCCACCAAGCCGCTGTTTAATGCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATTCCCAGCTCATACCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGAtg > 1:1801750/1‑150 (MQ=255) aaaTCGACGCTATGTAGCAGCACTTGCGCAGAGTGAAGCCCACCAAGCCGCTGTTTAATGCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATTCCCAGCTCATACCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGAtgt < 1:4844471/150‑1 (MQ=255) aaTCGACGCTATGTAGCGGCACTTGCGCAGAGTGAAGCCCACCAAGCCGCTGTTTAATGCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATTCCCAGCTCATACCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGAtgtg > 1:5117716/1‑150 (MQ=255) gACGCTATGTAGCAGCACTTGCGCAGAGTGAAGCCCACCAAGCCGCTGTTTAATGCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATTCCCAGCTCATTCCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGtt > 2:1665395/1‑150 (MQ=255) gACGCTATGTAGCAGCACTTGCGCAGAGTGAAGCCCACCAAGCCGCTGTTTAATGCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATTCCCAGCTCATTCCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGtt > 1:4000056/1‑150 (MQ=255) cTATGTAGCAGCACTTGCGCAGAGTGAAGCCCACCAAGCCGCTGTTTAATGCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATTCCCAGCTCATACCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCg < 2:1827334/150‑1 (MQ=255) tATGTAGCAGCACTTGCGCAGAGTGAAGCCCACCAAGCCGCTGTTTAATGCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATTCCCAGCTCATACCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGc > 1:653533/1‑150 (MQ=255) aTGTAGCAGCACTTGCGCAGAGTGAAGCCCACCAAGCCGCTGTTTAATGCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATTCCCAGCTCATACCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGca < 1:2772233/150‑1 (MQ=255) tGTAGCAGCACTTGCGCAGAGTGAAGCCCACCAAGCCGCTGTTTAATGCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATTCCCAGCTCATACCTCCCAGCAAACCCATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGcaa > 2:1372079/1‑150 (MQ=255) tGTAGCAGCACTTGCGCAGAGTGAAGCCCACCAAGCCGCTGTTTAATGCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATTCCCAGCTCATACCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGcaa > 1:3046797/1‑150 (MQ=255) gTAGCAGCACTTGCGCAGAGTGAAGCCCACCAAGCCGCTGTTTAATGCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATTCCCAGCTCATTCCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGcaac < 1:877378/150‑1 (MQ=255) gcagcaCTTGCGCAGAGTGAAGCCCACCAAGCCGCTGTTTAATGCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATTCCCAGCTCATACCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAg < 1:1061219/150‑1 (MQ=255) gcaCTTGCGCAGAGTGAAGCCCACCAAGCCGCTGTTTAATGCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATTCCCAGCTCATACCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCt < 1:2181549/150‑1 (MQ=255) aCTTGCGCAGAGTGAAGCCCACCAAGCCGCTGTTTAATGCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATTCCCAGCTCATACCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGa > 1:3547317/1‑150 (MQ=255) tGCGCAGAGTGAAGCCCACCAAGCCGCTGTTTAATGCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATTCCCAGCTCATACCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGAATa > 1:1297943/1‑150 (MQ=255) gcgcAGAGTGAAGCCCACCAAGCCGCTGTTTAATGCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATTCCCAGCTCATACCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGAATaa < 2:2323723/150‑1 (MQ=255) gcgcAGAGTGAAGCCCACCAAGCCGCTGTTTAATGCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATTCCCAGCTCATACCTCCCAGCAAACCAATTGTTTACATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGAATaa < 2:3740478/150‑1 (MQ=255) cAGAGTGAAGCCCACCAAGCCGCTGTTTAATGCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATTCCCAGCTCATACCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGACTAAGGa > 2:4873840/1‑150 (MQ=255) cAGAGTGAAGCCCACCAAGCCGCTGTTTAATGCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATTCCCAGCTCATACCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGAATAAGGa < 2:3141042/150‑1 (MQ=255) ccaccaAGCCGCTGTTTAATGCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATTCCCAGCTCATACCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAAc > 2:2923309/1‑150 (MQ=255) caccaAGCCGCTGTTTAATGCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATTCCCAGCTCATACCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAACg > 2:1772712/1‑150 (MQ=255) accaAGCCGCTGTTTAATGCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATTCCCAGCTCATTCCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAACGc > 2:4559/1‑150 (MQ=255) accaAGCCGCTGTTTAATGCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATTCCCAGCTCATACCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAACGc > 1:1631886/1‑150 (MQ=255) ccaAGCCGCTGTTTAATGCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATTCCCAGCTCATTCCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAACGcc > 2:1612370/1‑150 (MQ=255) ccaAGCCGCTGTTTAATGCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATTCCCAGCTCATACCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAACGcc > 2:558950/1‑150 (MQ=255) aaGCCGCTGTTTAATGCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATTCCCAGCTCATACCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTc < 1:718857/150‑1 (MQ=255) gCCGCTGTTTAATGCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATTCCCAGCTCATTCCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCaa < 1:2126963/150‑1 (MQ=255) cGCTGTTTAATGCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATTCCCAGCTCATACCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAATCGCCTCAACg > 2:3004088/1‑150 (MQ=255) cGCTGTTTAATGCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATTCCCAGCTCATACCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACg > 1:548110/1‑150 (MQ=255) cTGTTTAATGCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATTCCCAGCTCATACCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGc > 1:4648400/1‑150 (MQ=255) tttAATGCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATTCCCAGCTCATACCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCaa < 1:488863/150‑1 (MQ=255) aaTGCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATTCCCAGCTCATACCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTg > 2:4141583/1‑150 (MQ=255) aaTGCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATTCCCAGCTCATACCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTg < 1:1162379/150‑1 (MQ=255) tGCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATTCCCAGCTCATTCCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGcc > 2:1043051/1‑150 (MQ=255) tGCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATTCCCAGCTCATACCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGcc > 2:1000665/1‑150 (MQ=255) gCCTTCATTTATCAATCGATAGTATGTAATGGTGGATTCCCAGCTCATACCTCCCAGAAAACCAATTGTTTTCTTTCCTCTCTCCTGATGTGTGTTACCGCAAAAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGccc < 1:1892455/150‑1 (MQ=255) gCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATTCCCAGCTCATCCCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGccc < 2:3395562/150‑1 (MQ=255) gCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATTCCCAGCTCATACCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGccc < 1:2989105/150‑1 (MQ=255) ttCATTTATCAAACGATAGTAAGGAATGGTGGATTCCCAGCTCATTCCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAAt < 1:3708683/150‑1 (MQ=255) cATTTATCAAACGATAGTAAGGAATGGTGGATTCCCAGCTCATTCCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAAttt > 2:490152/1‑148 (MQ=255) ttATCAAACGATAGTAAGGAATGGTGGATTCCCAGCTCATTCCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATTTCTa < 2:783278/150‑1 (MQ=255) tATCAAACGATAGTAAGGAATGGTGGATTCCCAGCTCATACCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATTTCTAt > 1:4037564/1‑150 (MQ=255) tCAAACGATAGTAAGGAATGGTGGATGCCCAGCTCATACCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATTTCTATTa < 2:716517/150‑1 (MQ=255) aaaCGATAGTAAGGAATGGTGGATTCCCAGCTCATACCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATTTCTATTAAc > 1:3859301/1‑150 (MQ=255) aaCGATAGTAAGGAATGGTGGATTCCCAGCTCATACCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAATGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATTTCTATTAACg > 1:3254159/1‑150 (MQ=255) aaCGATAGTAAGGAATGGTGGATTCCCAGCTCATACCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATTTCTATTAACg > 1:2602987/1‑150 (MQ=255) aaCGATAGTAAGGAATGGTGGATTCCCAGCTCATACCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATTTCTATTAACg < 1:801159/150‑1 (MQ=255) gATAGTAAGGAATGGTGGATTCCCAGCTCATTCCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATTTCTATTAACGaaa > 2:1609508/1‑150 (MQ=255) aTAGTAAGGAATGGTGGATTCCCAGCTCATACCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATTTCTATTAACGaaaa > 1:685880/1‑150 (MQ=255) gTAAGGAATGGTGGATTCCCAGCTCATACCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATTTCTATTAACGAAAAAAg < 1:4564974/150‑1 (MQ=255) tAAGGAATGGTGGATTCCCAGCTCATACCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATTTCTATTAACGAAAAAAgg > 1:4446407/1‑150 (MQ=255) tAAGGAATGGTGGATTCCCAGCTCATACCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATTTCTATTAACGAAAAAAgg < 1:3174006/150‑1 (MQ=255) aaGGAATGGTGGATTCCCAGCTCATTCCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATTTCTATTAACGAAAAAAggg < 1:2884564/150‑1 (MQ=255) ggAATGGTGGATTCCCAGCTCATACCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATTTCTATTAACGAAAAAAGGGcc > 2:3468438/1‑150 (MQ=255) ggAATGGTGGATTCCCAGCTCATACCTCCCAGAAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATTTCTATTAACGAAAAAAGGGcc < 1:3651079/150‑1 (MQ=255) aaTGGTGGATTCCCAGCTCATTCCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATTTCTATTAACGAAAAAAGGGCCgg < 2:3895071/150‑1 (MQ=255) aaTGGTGGATTCCCAGCTCATACCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATTTCTATTAACGAAAAAAGGGCCgg < 2:1972351/150‑1 (MQ=255) aaTGGTGGATTCCCAGCTCATACCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAACGCCGCAACGGCCAAGTGCCCAATTTCTAGTAACGAAAAATGGGCCgg > 1:3017119/1‑150 (MQ=255) ggATTCCCAGCTCATTCCTCCCAGCAAACCAATTGTATTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGATGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATTTCTATTAACGAAAAAAGGGCCGGATGTAc > 1:2779384/1‑150 (MQ=255) ggATTCCCAGCTCATACCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATTTCTATTAACGAAAAAAGGGCCGGATGTAc > 1:2322211/1‑150 (MQ=255) ggATTCCCAGCTCATACCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATTTCTATTAACGAAAAAAGGGCCGGATGTAc < 1:3738196/150‑1 (MQ=255) gATTCCCAGCTCATTCCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATTTCTATTAACGAAAAAAGGGCCGGATGTACa < 1:4723853/150‑1 (MQ=255) aTTCCCAGCTCATTCCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATTTCTATTAACGAAAAAAGGGCCGGATGTACAg < 2:2020930/150‑1 (MQ=255) ttCCCAGCTCATACCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATTTCTATTAACGAAAAAAGGGCCGGATGTACAGc < 1:3266658/150‑1 (MQ=255) tCCCAGCTCATACCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGACTAAGGAACGAGACAAACGCCTCAACGGCCCAGTGCCCAATTTCTCTTAACGAACAAAGGGCCGGATGTACAGca > 2:2217926/1‑150 (MQ=255) aGCTCATACCTCCCAGCAAACCAATTGTTTTCATTCCTCTCACCTGATGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATTTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATc < 2:3220254/150‑1 (MQ=255) gCTCATACCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATTTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATcc < 1:4474196/150‑1 (MQ=255) cTCATACCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATTTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCg > 1:1006167/1‑150 (MQ=255) tCATACCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATTTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCgg < 1:1380043/150‑1 (MQ=255) tCATACCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATTTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCgg < 2:1908384/150‑1 (MQ=255) | TATCCCATTCCCCGCGACGCTGGCACTCTTCTATTTCATGAAAATCGACGCTATGTAGCAGCACTTGCGCAGAGTGAAGCCCACCAAGCCGCTGTTTAATGCCTTCATTTATCAAACGATAGTAAGGAATGGTGGATTCCCAGCTCATTCCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGG > CP009273/2973820‑2974113 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |