| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,176,820 | G→T | 100% | intergenic (+138/+352) | zupT → / ← ribB | zinc transporter/3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,176,820 | 0 | G | T | 96.8% | 683.8 / 9.6 | 219 | intergenic (+138/+352) | zupT/ribB | zinc transporter/3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase |
| Reads supporting (aligned to +/- strand): ref base G (4/3); new base T (94/118); total (98/121) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.03e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.64e-01 | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 219 total aligned reads displayed.
ATTGGTTAAAAACAACATCAGAAGTTGTCCAGCGCATGGACAACTTCTGCCAGCTTCACGAAAGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTGGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCTTTTACCCTTAATATTTAACAATACTAAACATTTAGCGTATAAATTTCACATAT > CP009273/3176674‑3176966 | ttGGTTAACAACAACATCAGAAGTTGTCCAGCGCATGGACAACTTCTGCCAGCTTCACTAAAGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGa < 2:4518368/150‑1 (MQ=255) gtGGTTACAAACAACATCAGCGGTTGTCCCGCGCCGGGACAACTTCTGCCAGCTTCACTAAAGCCTTATTCTTCCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGa < 1:4049778/149‑1 (MQ=255) aaaCAACATCAGAAGTTGTCCAGCGCATGGACAACTTCTGCCAGCTTCACTAAAGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCg < 1:1383793/150‑1 (MQ=255) aaaCAACATCAGAAGTTGTCCAGCGCATGGACAACTTCTGCCAGCTTCACTAAAGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCg > 1:1834671/1‑150 (MQ=255) acaacaTCAGAAGTTGTCCAGCGCATGGACAACTTCTGCCAGCTTCACTAAAGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGAc > 1:4887960/1‑150 (MQ=255) acaTCAGAAGTTGTCCAGCGCATGGACAACTTCTGCCAGCTTCACTAAAGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAAt < 1:3938945/150‑1 (MQ=255) caTCAGCAGTTGTCCAGCGCATGGACAACTTCTGCCAGCTTCACTAAAGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATa < 2:1572134/150‑1 (MQ=255) tCAGAAGTTGTCCAGCGCATGGACAACTTCTGCCAGCTTCACTAAAGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAAc < 1:3407499/150‑1 (MQ=255) tCAGAAGTTGTCCAGCGCATGGACAACTTCTGCCAGCTTCACTAAAGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAAc > 1:2030409/1‑150 (MQ=255) gAAGTTGTCCAGCGCATGGACAACTTCTGCCAGCTTCACTAAAGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGtt < 2:2278204/150‑1 (MQ=255) aGTTGTCCAGCGCATGGACAACTTCTGCCAGCTTCACTAAAGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTc < 2:1781656/150‑1 (MQ=255) tGTCCAGCGCATGGACAACTTCTGCCAGCTTCACTAAAGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCaaa < 2:4083898/150‑1 (MQ=255) tCCAGCGCATGGACAACTTCTGCCAGCTTCACTAAAGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATg < 1:2479258/150‑1 (MQ=255) tCCAGCGCATGGACAACTTCTGCCAGCTTCACTAAAGCCTTATTCTACCGTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATg < 2:3439195/150‑1 (MQ=255) ccAGCGCATGGACAACTTCTGCCAGCTTCACTAAAGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGc > 1:4952161/1‑150 (MQ=255) gcgcATGGACAACTTCTGCCAGCTTCACTAAAGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAgg < 1:1693269/150‑1 (MQ=255) cgcATGGACAACTTCTGCCAGCTTCACTAAAGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGa < 2:1540524/150‑1 (MQ=255) cgcATGGACAACTTCTGCCAGCTTCACTAAAGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGa < 1:4395485/150‑1 (MQ=255) aTGGACAACTTCTGCCAGCTTCACTAAAGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAAt > 1:4916757/1‑150 (MQ=255) gACAACTTCTGCCAGCTTCACTAAAGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAAc < 2:3824221/150‑1 (MQ=255) aaCTTCTGCCAGCTTCACTAAAGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACcca > 1:1528659/1‑150 (MQ=255) cTTCTGCCAGCTTCACTAAAGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACccacc > 2:2460019/1‑150 (MQ=255) cTTCTGCCAGCTTCACTAAAGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACccacc < 1:4664192/150‑1 (MQ=255) cTTCTGCCAGCTTCACTAAAGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACccacc > 1:4384641/1‑150 (MQ=255) cTTCTGCCAGCTTCACTAAAGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACccacc > 1:429644/1‑150 (MQ=255) ttCTGCCAGCTTCACTAAAGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACccacca < 2:4144558/150‑1 (MQ=255) ttCTGCCAGCGTCACTAAAGCCTTATTCGACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACccacca < 2:1335640/150‑1 (MQ=255) ccAGCTTCACTAAAGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAAcc > 2:3545177/1‑150 (MQ=255) cAGCTTCACTAAAGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCa > 1:2683968/1‑150 (MQ=255) aGCTTCACTAAAGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCag < 2:251067/150‑1 (MQ=255) aGCTTCACTAAAGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCag < 2:4150866/150‑1 (MQ=255) cACTAAAGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGcaa < 2:4442179/150‑1 (MQ=255) actaaaGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGcaat > 2:1032226/4‑150 (MQ=255) aaGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGcaatcaat > 2:4686745/1‑150 (MQ=255) ccTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACa < 2:1594072/150‑1 (MQ=255) cTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCCATCAATACaa > 2:653835/1‑150 (MQ=255) tATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCGATACAATc > 2:3597380/1‑150 (MQ=255) tATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATc > 1:233352/1‑150 (MQ=255) tATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACACACCACAACCAGAGCAATCAATACAATc > 2:1749324/1‑150 (MQ=255) cTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGt > 1:3343777/1‑150 (MQ=255) tACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCAAGTa < 2:2111855/150‑1 (MQ=255) ccTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTAcc < 2:1258524/150‑1 (MQ=255) ccTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTGGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTAcc > 2:1490525/1‑150 (MQ=255) ccTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTGGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTAcc > 1:2166552/1‑150 (MQ=255) cTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCa < 1:3693613/150‑1 (MQ=255) cTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCa > 1:3054359/1‑150 (MQ=255) ttttCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAg < 1:1154110/150‑1 (MQ=255) tttCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAgg < 2:2249595/150‑1 (MQ=255) tttCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAgg < 1:1185206/150‑1 (MQ=255) tttCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAgg < 1:2119723/150‑1 (MQ=255) ttCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGc < 2:5106677/150‑1 (MQ=255) ggCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGAt < 2:1937665/150‑1 (MQ=255) tcTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATa > 2:528754/2‑150 (MQ=255) gCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATa < 2:303490/150‑1 (MQ=255) cTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATaa > 1:3286823/1‑150 (MQ=255) cTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATaa < 2:366933/150‑1 (MQ=255) tttctcttctctCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATaaa > 2:4233269/3‑150 (MQ=255) tctcttctctCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACa < 1:1461615/150‑1 (MQ=255) tctcttctctCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACa > 1:3832207/1‑150 (MQ=255) tctcttctctCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACa > 1:1202946/1‑150 (MQ=255) tcttctctCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATc < 1:973806/150‑1 (MQ=255) cttctctCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATcc > 2:4757964/1‑150 (MQ=255) ttctctCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCt > 1:4755504/1‑150 (MQ=255) tctctcGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCtt < 2:490919/150‑1 (MQ=255) ctctcGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAATTGCAGGAAATAACCCACCACAACCCGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCttt < 1:653835/150‑1 (MQ=255) ctcGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTGGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCTTTTa > 1:134095/1‑150 (MQ=255) tcGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCACGACAATAACGTTTATAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCTTTTAc < 1:3480660/150‑1 (MQ=255) tACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCTTTTACCCt < 2:2879551/150‑1 (MQ=255) gTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCTTTTACCCTTAat < 2:1705589/150‑1 (MQ=255) tAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCTTTTACCCTTAATAtt > 2:4278487/1‑150 (MQ=255) tAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCTTTTACCCTTAATAtt < 2:2142402/150‑1 (MQ=255) tAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCTTTTACCCTTAATAtt < 1:3571081/150‑1 (MQ=255) aaGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCATTGCGAAACGCCCGACAATAAAGTTTATAATGCAGGTAATAACCCACCACAACCAGAGCAATAAATACAATCCAGTACCATGCGATAAACATCCTTTTACCCTTAATAttt < 2:5084279/150‑1 (MQ=255) aTTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCTTTTACCCTTAATATTTAACa < 1:4022429/150‑1 (MQ=255) aTTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTGGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCTTTTACCCTTAATATTTAACa < 2:4335735/150‑1 (MQ=255) ttCCGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCTTTTACCCTTAATATTTAACAATACt > 2:2543663/1‑150 (MQ=255) ccGCGCTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCTTTTACCCTTAATATTTAACAATACTaa > 2:1154370/1‑150 (MQ=255) gcgcTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCTTTTACCCTTAATATTTAACAATACTAAAc > 1:3614563/1‑150 (MQ=255) cgcTTCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCTTTTACCCTTAATATTTAACAATACTAAACa > 2:1378031/1‑150 (MQ=255) ttCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCTTTTACCCTTAATATTTAACAATACTAAACAttt < 2:2683968/150‑1 (MQ=255) ttCAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCTTTTACCCTTAATATTTAACAATACTAAACAttt < 1:1613416/150‑1 (MQ=255) cAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCTTTTACCCTTAATATTTAACAATACTAAACATTTAg > 2:1457954/1‑150 (MQ=255) cAAGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCTTTTACCCTTAATATTTAACAATACTAAACATTTAg > 2:134189/1‑150 (MQ=255) aaGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCTTTTACCCTTAATATTTAACAATACTAAACATTTAGc < 1:1030235/150‑1 (MQ=255) aaGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCTTTTACCCTTAATATTTAACAATACTAAACATTTAGc < 1:848188/150‑1 (MQ=255) aaGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCTTTTACCCTTAATATTTAACAATACTAAACATTTAGc < 1:2431705/150‑1 (MQ=255) aaGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCTTTTACCCTTAATATTTAACAATACTAAACATTTAGc > 1:2625390/1‑150 (MQ=255) aGCAGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCTTTTACCCTTAATATTTAACAATACTAAACATTTAGCg > 2:4198044/1‑150 (MQ=255) aGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCTTTTACCCTTAATATTTAACAATACTAAACATTTAGCGtat > 2:4076561/1‑150 (MQ=255) aGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCTTTTACCCTTAATATTTAACAATACTAAACATTTAGCGtat < 1:2543663/150‑1 (MQ=255) aGTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCTTTTACCCTTAATATTTAACAATACTAAACATTTAGCGtat > 1:2866144/1‑150 (MQ=255) gTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCTTTTACCCTTAATATTTAACAATACTAAACATTTAGCGtata < 2:2723016/150‑1 (MQ=255) gTGCGTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCTTTTACCCTTAATATTTAACAATACTAAACATTTAGCGtata > 1:4742069/1‑150 (MQ=255) gTCTCTGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCTTTTACCCTTAATATTTAACAATACTAAACATTTAGCGTATAAAtt > 2:1213086/1‑150 (MQ=255) ctGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCTTTTACCCTTAATATTTAACAATACTAAACATTTAGCGTATAAATTTcac < 1:1708560/150‑1 (MQ=255) ctGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCTTTTACCCTTAATATTTAACAATACTAAACATTTAGCGTATAAATTTcac > 2:3166893/1‑150 (MQ=255) tGTCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCTTTTACCCTTAATATTTAACAATACTAAACATTTAGCGTATAAATTTcaca < 1:4509101/150‑1 (MQ=255) tCCTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCTTTTACCCTTAATATTTAACAATACTAAACATTTAGCGTATAAATTTCACata > 1:3521294/1‑150 (MQ=255) ccTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCTTTTACCCTTAATATTTAACAATACTAAACATTTAGCGTATAAATTTCACatat > 1:1225489/1‑150 (MQ=255) ccTTGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCTTTTACCCTTAATATTTAACAATACTAAACATTTAGCATATAAATTTCACatat > 2:3458654/1‑150 (MQ=255) | ATTGGTTAAAAACAACATCAGAAGTTGTCCAGCGCATGGACAACTTCTGCCAGCTTCACGAAAGCCTTATTCTACCTTTTCGGCTGTCTCTTCTCTCGTACTGTTTAAGTATTTGTTCCGCGCTTCAAGCAGTGCGTCTCTGTCCTGGCGAAACGCCCGACAATAACGTTTCAAATGCAGGAAATAACCCACCACAACCAGAGCAATCAATACAATCCAGTACCAGGCGATAAACATCCTTTTACCCTTAATATTTAACAATACTAAACATTTAGCGTATAAATTTCACATAT > CP009273/3176674‑3176966 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |