| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,466,238 | A→T | 17.0% | V212V (GTT→GTA) | fusA ← | protein chain elongation factor EF‑G, GTP‑binding |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,466,238 | 0 | A | T | 17.0% | 738.7 / 116.7 | 284 | V212V (GTT→GTA) | fusA | protein chain elongation factor EF‑G, GTP‑binding |
| Reads supporting (aligned to +/- strand): ref base A (119/116); new base T (22/27); total (141/143) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.31e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 286 total aligned reads displayed.
TGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTATTTTTCCATCAGCTCTTCAGAAGCTTCAGCTGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCAACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCC > CP009273/3466090‑3466387 | gatTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTATTTTTCCATCAGCTCTTCAGAAGCTTCAGCTGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCAAc > 1:3148399/1‑150 (MQ=255) ttCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTATTTTTCCATCAGCTCTTCAGAAGCTTCAGCTGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCAACCAt < 2:1910005/150‑1 (MQ=255) cGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTATTTTTCCATCAGCTCTTCAGAAGCTTCAGCTGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCAACCATGt > 1:1653334/1‑150 (MQ=255) gttgttCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTATTTTTCCATCAGCTCTTCAGAAGCTTCAGCTGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCAACCATGTc > 1:3065253/1‑150 (MQ=255) tgttCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTATTTTTCCATCAGCTCTTCAGAAGCTTCAGCTGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCAACCATGTCTg < 2:159797/150‑1 (MQ=255) tgttCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTATTTTTCCATCAGCTCTTCAGAAGCTTCAGCTGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCAACCATGTCTg < 2:4581144/150‑1 (MQ=255) tgttCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTATTTTTCCATCAGCTCTTCAGAAGCTTCAGCTGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCAACCATGTCTg < 1:1519772/150‑1 (MQ=255) tgttCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTATTTTTCCATCAGCTCTTCAGAAGCTTCAGCTGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCAACCATGTCTg > 2:2533724/1‑150 (MQ=255) tgttCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTATTTTTCCATCAGCTCTTCAGAAGCTTCAGCTGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCAACCATGTCTg < 2:1157598/150‑1 (MQ=255) gttCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTATTTTTCCATCAGCTCTTCAGAAGCTTCAGCTGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCAACCATGTCTGc < 2:3571516/150‑1 (MQ=255) ttCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTATTTTTCCATCAGCTCTTCAGAAGCTTCAGCTGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCTACCATGTCTGcc < 1:4515657/150‑1 (MQ=255) tCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTATTTTTCCATCAGCTCTTCAGAAGCTTCAGCTGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCAACCATGTCTGCCg > 2:4104070/1‑150 (MQ=255) cAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTATTTTTCCATCAGCTCTTCAGAAGCTTCAGCTGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCAACCATGTCTGCCgg > 2:4979169/1‑150 (MQ=255) aGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTATTTTTCCATCAGCTCTTCAGAAGCTTCAGCTGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCTACCATGTCTGCCggg < 2:1739358/150‑1 (MQ=255) aGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTATTTTTCCATCAGCTCTTCAGAAGCTTCAGCTGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCAACCATGTCTGCCggg > 1:1734135/1‑150 (MQ=255) aGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTATTTTTCCATCAGCTCTTCAGAAGCTTCAGCTGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCAACCATGTCTGCCggg > 2:902972/1‑150 (MQ=255) aaCGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTATTTTTCCATCAGCTCTTCAGAAGCTTCAGCTGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCAACCATGTCTGCCGGGat < 1:180224/150‑1 (MQ=255) gcTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTATTTTTCCATCAGCTCTTCAGAAGCTTCAGCTGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCAACCATGTCTGCCGGGATATCtt > 1:807924/1‑150 (MQ=255) gcTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTATTTTTCCATCAGCTCTTCAGAAGCTTCAGCTGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCAACCATGTCTGCCGGGATATCtt < 2:4313788/150‑1 (MQ=255) tGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTATTTTTCCATCAGCTCTTCAGAAGCTTCAGCTGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCAACCATGTCTGCCGGGATATCTTCg > 2:2394865/1‑150 (MQ=255) gCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTATTTTTCCATCAGCTCTTCAGAAGCTTCAGCTGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCTACCATGTCTGCCGGGATATCTTCGTAtt > 2:1042133/1‑150 (MQ=255) cAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTATTTTTCCATCAGCTCTTCAGAAGCTTCAGCTGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCTACCATGTCTGCCGGGATATCTTCGTATTc > 1:1762095/1‑150 (MQ=255) agagCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTATTTTTCCATCAGCTCTTCAGAAGCTTCAGCTGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCAACCATGTCTGCCGGGATATCTTCGTATTCg > 1:2410642/1‑150 (MQ=255) gagCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTATTTTTCCATCAGCTCTTCAGAAGCTTCAGCTGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCTACCATGTCTGCCGGGATATCTTCGTATTCGa < 1:3555430/150‑1 (MQ=255) agCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTATTTTTCCATCAGCTCTTCAGAAGCTTCAGCTGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCAACCATGTCTGCCGGGATATCTTCGTATTCGaa > 2:349765/1‑150 (MQ=255) gCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTATTTTTCCATCAGCTCTTCAGAAGCTTCAGCTGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCAACCATGTCTGCCGGGATATCTTCGTATTCGAAg > 2:4203674/1‑150 (MQ=255) gCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTATTTTTCCATCAGCTCTTCAGAAGCTTCAGCTGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCAACCATGTCTGCCGGGATATCTTCGTATTCGAAg > 2:4844254/1‑150 (MQ=255) tttGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTATTTTTCCATCAGCTCTTCAGAAGCTTCAGCTGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCAACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTAc < 2:1590616/150‑1 (MQ=255) gATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTATTTTTCCATCAGCTCTTCAGAAGCTTCAGCTGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCAACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGcc > 2:337138/1‑150 (MQ=255) aTTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTATTTTTCCATCAGCTCTTCAGAAGCTTCAGCTGCGGATTCGATCAGGTTCTGTTGCCATTCGTTAGCCAGTTCTACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGccc > 1:66721/1‑150 (MQ=255) aTTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTATTTTTCCATCAGCTCTTCAGAAGCTTCAGCTGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCAACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGccc < 2:3243072/150‑1 (MQ=255) aTTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTATTTTTCCATCAGCTCTTCAGAAGCTTCAGCTGCGCATTCGATCAGGTTCAGGTGCCATTCTTTAGACAGTTCAACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGccc > 1:495192/1‑150 (MQ=255) tttCTGCTTCAGTCAGTTCTTCACCACCCAGGTATTTTTCCATCAGCTCTTCAGAAGCTTCAGCTGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCAACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCt < 1:1015321/150‑1 (MQ=255) cTGCTTCAGTCAGTTCTTCACCACCCAGGTATTTTTCCATCAGCTCTTCAGAAGCTTCAGCTGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCAACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGt > 1:3671445/1‑150 (MQ=255) gCTTCAGTCAGTTCTTCACCACCCAGGTATTTTTCCATCAGCTCTTCAGAAGCTTCAGCTGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCAACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCa > 1:3317048/1‑150 (MQ=255) gCTTCAGTCAGTTCTTCACCACCCAGGTATTTTTCCATCAGCTCTTCAGAAGCTTCAGCTGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCAACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCa > 1:4393277/1‑150 (MQ=255) ttCAGTCAGTTCTTCACCACCCAGGTATTTTTCCATCAGCTCTTCAGAAGCTTCAGCTGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCAACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGc > 1:5118899/1‑150 (MQ=255) cagtcagtTCTTCACCACCCAGGTATTTTTCCATCAGCTCTTCAGAAGCTTCAGCTGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCAACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGcgt > 2:4685100/1‑150 (MQ=255) cagtcagtTCTTCACCACCCAGGTATTTTTCCATCAGCTCTTCAGAAGCTTCAGCTGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCAACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGcgt > 2:2127124/1‑150 (MQ=255) agtcagtTCTTCACCACCCAGGTATTTTTCCATCAGCTCTTCAGAAGCTTCAGCTGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCAACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGcgtc < 1:3496703/150‑1 (MQ=255) gtcagtTCTTCACCACCCAGGTATTTTTCCATCAGCTCTTCAGAAGCTTCAGCTGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCAACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGcgtcg > 1:3812454/1‑150 (MQ=255) cagtTCTTCACCACCCAGGTATTTTTCCATCAGCTCTTCAGAAGCTTCAGCTGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCAACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGtt < 2:3551651/150‑1 (MQ=255) cagtTCTTCACCACCCAGGTATTTTTCCATCAGCTCTTCAGAAGCTTCAGCTGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCAACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGtt < 2:1224866/150‑1 (MQ=255) cagtTCTTCACCACCCAGGTATTTTTCCATCAGCTCTTCAGAAGCTTCAGCTGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCAACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGtt < 1:4180841/150‑1 (MQ=255) tcttcACCACCCAGGTATTTTTCCATCAGCTCTTCAGAAGCTTCAGCTGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCTACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAg < 2:5152525/150‑1 (MQ=255) tcACCACCCAGGTATTTTTCCATCAGCTCTTCAGAAGCTTCAGCTGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCAACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTg > 2:400689/1‑150 (MQ=255) tcACCACCCAGGTATTTTTCCATCAGCTCTTCAGAAGCTTCAGCTGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCAACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTg > 1:768461/1‑150 (MQ=255) tcACCACCCAGGTATTTTTCCATCAGCTCTTCAGAAGCTTCAGCTGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCAACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTg < 1:3740787/150‑1 (MQ=255) tcACCACCCAGGTATTTTTCCATCAGCTCTTCAGAAGCTTCAGCTGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCAACCATCTCTGCCGGGATATCTTCTTAGTCTAACGTTACGCCATGGTCAGCGACGTTCAAGTTg > 2:4831047/1‑150 (MQ=255) tcACCACCCAGGTATTTTTCCATCAGCTCTTCAGAAGCATCAGCTGCGGATTCGATCCGGTTCTGGTGCCATTCGTTAGCCAGATCAACCATGACTGCAGGGATATCTACGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGttt > 1:564048/1‑149 (MQ=255) accaccCAGGTATTTTTCCATCAGCTCTTCAGAAGCTTCAGCTGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCAACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGAt > 1:4244953/1‑150 (MQ=255) ccAGGTATTTTTCCATCAGCTCTTCAGAAGCTTCAGCTGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCAACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCtt < 2:133996/150‑1 (MQ=255) cAGGTATTTTTCCATCAGCTCTTCAGAAGCTTCAGCTGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCAACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCttt > 2:4711902/1‑150 (MQ=255) aGGTATTTTTCCATCAGCTCTTCAGAAGCTTCAGCTGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCAACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTc < 1:3216089/150‑1 (MQ=255) gTATTTTTCCATCAGCTCTTCAGAAGCTTCAGCTGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCAACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCAt > 1:4742366/1‑150 (MQ=255) ttttCCATCAGCTCTTCAGAAGCTTCAGCTGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCTACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTc > 1:1865172/1‑150 (MQ=255) ttttCCATCAGCTCTTCAGAAGCTTCAGCTGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCAACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTc < 1:4908262/150‑1 (MQ=255) ttCCATCAGCTCTTCAGAAGCTTCAGCTGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCTACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCAc < 1:112241/150‑1 (MQ=255) ccATCAGCTCTTCAGAAGCTTCAGCTGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCAACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCa > 2:2009773/1‑150 (MQ=255) cATCAGCTCTTCAGAAGCTTCAGCTGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCAACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAg < 1:2975958/150‑1 (MQ=255) tCAGCTCTTCAGAAGCTTCAGCTGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCAACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGt > 2:2634743/1‑150 (MQ=255) aGCTCTTCAGAAGCTTCAGCTGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCAACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTca > 1:2260335/1‑150 (MQ=255) ttCAGAAGCTTCAGCTGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCTACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCaacaac > 1:3108866/1‑150 (MQ=255) ttCAGAAGCTTCAGCTGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCAACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCaacaac < 2:1781837/150‑1 (MQ=255) ttCAGAAGCTTCAGCTGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCAACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCaacaac < 2:797404/150‑1 (MQ=255) ttCAGAAGCTTCAGCTGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCAACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCaacaac < 1:2737648/150‑1 (MQ=255) tCAGAAGCTTCAGCTGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCAACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAacaaca < 2:1967781/150‑1 (MQ=255) cAGAAGCTTCAGCTGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCAACCATGACTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACCacac > 1:3395951/1‑150 (MQ=255) aGAAGCTTCAGCTGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCTACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACAcc > 2:1473423/1‑150 (MQ=255) aaGCTTCAGCTGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTACTACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTAACCAGGTCAACAACACCgg > 1:887475/1‑150 (MQ=255) cTTCAGCTGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCAACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGa > 1:1200737/1‑150 (MQ=255) cAGCTGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCAACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAAt < 1:4682297/150‑1 (MQ=255) cAGCTGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCAACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAAt > 2:2720060/1‑150 (MQ=255) aGCTGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCAACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATg > 2:1436808/1‑150 (MQ=255) aGCTGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCAACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATg < 1:2374890/150‑1 (MQ=255) tGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCTACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGttc > 1:2038797/1‑150 (MQ=255) cGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCTACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGttctt < 1:4423936/150‑1 (MQ=255) gATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCAACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCa < 1:3540714/150‑1 (MQ=255) gATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCAACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCa < 2:279954/150‑1 (MQ=255) aTTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCAACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAg < 2:3773913/150‑1 (MQ=255) ttCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCAACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGc > 2:2189906/1‑150 (MQ=255) tCAGGTTCTGGTGCCATTCGTTAGCCAGTTCTACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCaa < 2:370635/150‑1 (MQ=255) tCAGGTTCTGGTGCCATTCGTTAGCCAGTTCTACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCaa < 2:4622071/150‑1 (MQ=255) aGGTTCTGGTGCCATTCGTTAGCCAGTTCAACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATc < 1:4006663/150‑1 (MQ=255) cTGGTGCCATTCGTTAGCCAGTTCAACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAg > 2:4277302/1‑150 (MQ=255) cTGGTGCCATTCGTTAGCCAGTTCAACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAg < 2:3002279/150‑1 (MQ=255) tGGTGCCATTCGTTAGCCAGTTCAACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGc > 2:4438695/1‑150 (MQ=255) aTTCGTTAGCCAGTTCAACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCg > 1:2578586/1‑150 (MQ=255) aTTCGTTAGCCAGTTCAACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCg > 1:1354932/1‑150 (MQ=255) ttCGTTAGCCAGTTCAACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCgg < 1:1438044/150‑1 (MQ=255) tCGTTAGCCAGTTCAACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTAAACAACACCGGTGAAATGTTCTTCAGCACCAATCGACAGCTGCAGCGGa > 1:3009124/1‑150 (MQ=255) ttAGCCAGTTCTACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAAcc < 2:3322141/150‑1 (MQ=255) ttAGCCAGTTCAACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAAca < 2:3065253/150‑2 (MQ=255) aGCCAGTTCAACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCgg < 1:4295964/150‑1 (MQ=255) aGCCAGTTCAACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCgg < 1:2127124/150‑1 (MQ=255) gCCAGTTCAACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCggg > 2:737458/1‑150 (MQ=255) cAGTTCAACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGtt > 1:2510122/1‑150 (MQ=255) gTTCAACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTcg < 2:560602/150‑1 (MQ=255) gTTCAACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTcg < 2:3148399/150‑1 (MQ=255) aaCCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGcc > 1:3893587/1‑150 (MQ=255) | TGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTATTTTTCCATCAGCTCTTCAGAAGCTTCAGCTGCGGATTCGATCAGGTTCTGGTGCCATTCGTTAGCCAGTTCAACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCC > CP009273/3466090‑3466387 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |