| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,590,906 | C→A | 100% | A5A (GCG→GCT) | livK ← | leucine transporter subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,590,906 | 0 | C | A | 97.9% | 885.9 / 7.5 | 279 | A5A (GCG→GCT) | livK | leucine transporter subunit |
| Reads supporting (aligned to +/- strand): ref base C (3/3); new base A (112/161); total (115/164) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.93e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.06e-01 | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 279 total aligned reads displayed.
TTTAATTGCCTGACGCGCGCCGTTAAATTCCATATCGCCCCACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAG > CP009273/3590759‑3591052 | ttAATTGCCTGACGCGCGCCGTTAAATTCCATATCGCCCCACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCa > 2:1138170/1‑150 (MQ=255) aaTTGCCTGACGCGCGCCGTTAAATTCCATATCGCCCCACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCAtt < 1:734141/150‑1 (MQ=255) aaTTGCCTGACGCGCGCCGTTAAATTCCATATCGCCCCACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCAtt < 2:2247176/150‑1 (MQ=255) ttGCCTGACGCGCGCCGTTAAATTCCATATCGCCCCACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTcc < 2:3767769/150‑1 (MQ=255) ttGCCTGACGCGCGCCGTTAAATTCCATATCGCCCCACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTcc > 2:353872/1‑150 (MQ=255) tGCCTGACGCGCGCCGTTAAATTCCATATCGCCCCACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCg < 1:5042744/150‑1 (MQ=255) tGCCTGACGCGCGCCGTTAAATTCCATATCGCCCCACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCg > 1:1422406/1‑150 (MQ=255) ccTGACGCGCGCCGTTAAATTCCATATCGCCCCACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGtt > 2:1630/1‑150 (MQ=255) cTGACGCGCGCCGTTAAATTCCATATCGCCCCACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGttt < 2:1873643/150‑1 (MQ=255) tGACGCGCGCCGTTAAATTCCATATCGCCCCACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTc < 2:593761/150‑1 (MQ=255) tGACGCGCGCCGTTAAATTCCATATCGCCCCACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTc < 1:317457/150‑1 (MQ=255) tGACGCGCGCCGTTAAATTCCATATCGCCCCACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTc < 2:2522025/150‑1 (MQ=255) tGACGCGCGCCGTTAAATTCCATATCGCCCCACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTc > 1:1732439/1‑150 (MQ=255) gACGCGCGCCGTTAAATTCCATATCGCCCCACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCa > 2:2757999/1‑150 (MQ=255) cgcCGTTAAATTCCATATCGCCCCACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCa > 1:3491170/1‑150 (MQ=255) cgcCGTTAAATTCCATATCGCCCCACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCa > 1:623920/1‑150 (MQ=255) aaaTTCCATATCGCCCCACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATcc > 2:3850849/1‑150 (MQ=255) aaaTTCCATATCGCCCCACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATcc < 2:2050674/150‑1 (MQ=255) aaTTCCATATCGCCCCACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATccc > 2:4308175/1‑150 (MQ=255) aTTCCATATCGCCCCACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATcccc < 2:1694471/150‑1 (MQ=255) tCCATATCGCCCCACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCAt < 2:3097801/150‑1 (MQ=255) cATATCGCCCCACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTc < 2:3952227/150‑1 (MQ=255) cGCCCCACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGAt < 2:4430296/150‑1 (MQ=255) gCCCCACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGGAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGCTTCATAGTCAAAAATCCCCATTCGTGAtg > 2:2266751/1‑150 (MQ=255) gCCCCACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGAtg > 2:3234543/1‑150 (MQ=255) gCCCCACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGAtg < 2:815788/150‑1 (MQ=255) cccACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCACCATTCGTGAtgtt > 1:3808693/1‑150 (MQ=255) aCTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGAtgttgtg < 2:3517449/150‑1 (MQ=255) cTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGAtgttgtgt > 2:839228/1‑150 (MQ=255) tGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGAtgttgtgtt < 1:4115099/150‑1 (MQ=255) tGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGAtgttgtgtt < 2:3898427/150‑1 (MQ=255) tGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGAtgttgtgtt > 1:128711/1‑150 (MQ=255) gggCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGAtgttgtgttg < 2:1564062/150‑1 (MQ=255) gCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCt < 2:3038239/150‑1 (MQ=255) gCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCt < 1:1943309/150‑1 (MQ=255) cAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCtt < 1:3134743/150‑1 (MQ=255) cAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCtt < 1:1510501/150‑1 (MQ=255) taTCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCttt > 2:1057671/2‑150 (MQ=255) aaTCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCttt < 1:2995130/150‑1 (MQ=255) aaTCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCttt < 1:54421/150‑1 (MQ=255) aTCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTg < 1:4463940/150‑1 (MQ=255) aTCGGGCCGGACATCGCGCCGACAACGACGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTg < 2:3635104/150‑1 (MQ=255) cGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGtt > 2:3302924/1‑150 (MQ=255) gggCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGttt > 2:1422458/1‑150 (MQ=255) ccGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTa < 2:4727894/150‑1 (MQ=255) cGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTAt < 2:4557504/150‑1 (MQ=255) cGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTAt < 1:173777/150‑1 (MQ=255) ggACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTAtg < 1:187464/150‑1 (MQ=255) gACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTAtgt < 1:2112527/150‑1 (MQ=255) gcCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACaa > 2:1306107/1‑150 (MQ=255) ccGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACaaa < 2:4120273/150‑1 (MQ=255) gACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATc > 1:3369203/1‑150 (MQ=255) aaCGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGa > 1:2707661/1‑150 (MQ=255) ggCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTg < 1:3595078/150‑1 (MQ=255) gACTTTAATATCGTCAGCCCTAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTc > 2:2730441/1‑150 (MQ=255) gACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTc < 1:669901/150‑1 (MQ=255) aCTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCt < 1:2757999/150‑1 (MQ=255) cTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCtt < 1:4642688/150‑1 (MQ=255) tttAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCttt < 2:2837536/150‑1 (MQ=255) tAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCttttt < 2:4071044/150‑1 (MQ=255) tAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCttttt < 1:1652052/150‑1 (MQ=255) tAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCttttt < 1:4812183/150‑1 (MQ=255) aaTATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCtttttt < 1:149739/150‑1 (MQ=255) atatCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCttttttt < 1:4615425/150‑1 (MQ=255) atCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTtat < 2:4630554/150‑1 (MQ=255) atCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTtat > 2:703406/1‑150 (MQ=255) tCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTtata < 1:1037486/150‑1 (MQ=255) tCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTtata > 2:339294/1‑150 (MQ=255) ccATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACt < 1:4445901/150‑1 (MQ=255) ccATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACt > 1:2147024/1‑150 (MQ=255) cATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTg > 2:1975581/1‑150 (MQ=255) aTAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGt > 2:3184135/1‑150 (MQ=255) gCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGtttt > 2:63197/1‑150 (MQ=255) cGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGttttt < 2:14981/150‑1 (MQ=255) ggTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTg > 2:3791372/1‑150 (MQ=255) gtgtgAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCt < 1:1110717/150‑1 (MQ=255) tgtgAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTg < 1:230403/150‑1 (MQ=255) gtgAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGt > 1:1453643/1‑150 (MQ=255) aaTTGCCAGTGCAATCATCCCTGCGATGATAGTTTTAGCAGTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACTAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGa < 1:4407890/150‑1 (MQ=255) cAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAgg < 1:2909572/150‑1 (MQ=255) cAGTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCACATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTATCAAATCAGACTGTTCATTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAgg < 1:4791696/150‑1 (MQ=255) aGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAggg < 1:907576/150‑1 (MQ=255) gTGCAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAgggg < 2:2336911/150‑1 (MQ=255) cAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTa < 2:5013340/150‑1 (MQ=255) cAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTa < 1:3792840/150‑1 (MQ=255) cAATCATCCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCAATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTa < 2:2453854/150‑1 (MQ=255) atcatcCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAgc > 2:3832868/1‑150 (MQ=255) atcatcCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAgc < 1:4018163/150‑1 (MQ=255) atcatcCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAgc > 1:4207735/1‑150 (MQ=255) tcatcCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAgcg < 1:839225/150‑1 (MQ=255) tcatcCCTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAgcg > 1:2959790/1‑150 (MQ=255) ccTGCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTa > 2:496882/1‑150 (MQ=255) tcGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCAATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTAttt < 1:1734103/149‑1 (MQ=255) gCGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTAttt < 2:1732440/150‑1 (MQ=255) cGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTAtttt < 2:2379466/150‑1 (MQ=255) cGATGATAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTAtttt > 1:2486192/1‑150 (MQ=255) atgatAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTtgt < 2:4501124/150‑1 (MQ=255) atgatAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTtgt > 1:135666/1‑150 (MQ=255) tgatAGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTtgtg < 2:4139571/150‑1 (MQ=255) aGTTTTAGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGataa < 2:2319311/150‑1 (MQ=255) | TTTAATTGCCTGACGCGCGCCGTTAAATTCCATATCGCCCCACTGGGCAATCGGGCCGGACATCGCGCCGACAACGGCGACTTTAATATCGTCAGCCATAGCGGTGTGTGAAATTGCCAGTGCAATCATCCCTGCGATGATAGTTTTCGCATTCCGTTTCATAGTCAAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAG > CP009273/3590759‑3591052 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |