| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,604,298 | C→A | 9.3% | G266C (GGT→TGT) | yhhS ← | putative arabinose efflux transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,604,298 | 0 | C | A | 9.3% | 1171.5 / 60.9 | 353 | G266C (GGT→TGT) | yhhS | putative arabinose efflux transporter |
| Reads supporting (aligned to +/- strand): ref base C (166/154); new base A (13/20); total (179/174) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.02e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.40e-01 | |||||||||||
Only 100 of 360 total aligned reads displayed.
CCCCGCCAGTAAGACGCCGATTTTCGCCATCCACGGCATAGTCGCCACGCCAACCAGTAGCAGGCCGATTATCTCAACGCTAAAGCAAATCATCGCTACGTTTAAGCCACCGATACGGTTAATGCCGTTAGGGAATAACAAACGCGTACCGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCACCGTCCCAACCTTTAGCGTCATAAAACAGCGTGATAAAGGTGGCGATGACGCCAAATCCGGCGGAAGCCAGTGCCAGCGCCATACCGTACAGCCAGACGCGCCCAAGCA > CP009273/3604149‑3604447 | ccccGCCAGTAAGACGCCGATTTTCGCCATCCACGGCATAGTCGCCACGCCAACCAGTAGCAGGCCGATTATCTCAACGCTAAAGCAAATCATCGCTACGTTTAAGCCACCGATACGGTTAATGCCGTTAGGGAATAACAAACGCGTAcc < 1:1224529/150‑1 (MQ=255) cccGCCAGTACGACGCCGATTTTCGCCATCCACGGCATAGTCGCCACGCCAACCAGTAGCAGGCCGATTATCTCAACGCTAAAGCAAATCATCGCTACGTTTAAGCCACCGATACGGGTAATGCCGTTAGGGAATAACAAACGCGTACCg > 1:4706383/1‑150 (MQ=255) cccGCCAGTAAGACGCCGATTTTCGCCATCCACGGCATAGTCGCCACGCCAACCAGTAGCAGGCCGATTATCTCAACGCTAAAGCAAATCATCGCTACGTTTAAGCCACCGATACGGTTAATGCCGTTAGGGAATAACAAACGCGTACCg > 2:1640960/1‑150 (MQ=255) cccGCCAGTAAGACGCCGATTTTCGCCATCCACGGCATAGTCGCCACGCCAACCAGTAGCAGGCCGATTATCTCAACGCTAAAGCAAATCATCGCTACGTTTAAGCCACCGATACGGTTAATGCCGTTAGGGAATAACAAACGCGTACCg < 2:2533788/150‑1 (MQ=255) gCCAGTAAGACGCCGATTTTCGCCATCCACGGCATAGTCGCCACGCCAACCAGTAGCAGGCCGATTATCTCAACGCTAAAGCAAATCATCGCTACGTTTAAGCCACCGATACGGTTAATGCCGTTAGGGAATAACAAACGCGTACCGACa < 2:959843/150‑1 (MQ=255) ccAGTAAGACGCCGATTTTCGCCATCCACGGCATAGTCGCCACGCCAACCAGTAGCAGGCCGATTATCTCAACGCTAAAGCAAATCATCGCTACGTTTAAGCCACCGATACGGTTAATGCCGTTAGGGAATAACAAACGCGTACCGACaa < 2:1745930/150‑1 (MQ=255) aGTAAGACGCCGATTTTCGCCATCCACGGCATAGTCGCCACGCCAACCAGTAGCAGGCCGATTATCTCAACGCTAAAGCAAATCATCGCTACGTTTAAGCCACCGATACGGTTAATGCCGTTAGGGAATAACAAACGCGTACCGACAAAc > 1:1002730/1‑150 (MQ=255) aGTAAGACGCCGATTTTCGCCATCCACGGCATAGTCGCCACGCCAACCAGTAGCAGGCCGATTATCTCAACGCTAAAGCAAATCATCGCTACGTTTAAGCCACCGATACGGTTAATGCCGTTAGGGAATAACAAACGCGTACCGACAAAc > 2:4961719/1‑150 (MQ=255) aaGACGCCGATTTTCGCCATCCACGGCATAGTCGCCACGCCAACCAGTAGCAGGCCGATTATCTCAACGCTAAAGCAAATCATCGCTACGTTTAAGCCACCGATACGGTTAATGCCGTTAGGGAATAACAAACGCGTACAGACAAACGca > 2:4083530/1‑150 (MQ=255) cGCCGATTTTCGCCATCCACGGCATAGTCGCCACGCCAACCAGTAGCAGGCCGATTATCTCAACGCTAAAGCAAATCATCGCTACGTTTAAGCCACCGATACGGTTAATGCCGTTAGGGAATAACAAACGCGTACCGACAAACGCACAGc < 1:2280031/150‑1 (MQ=255) ccGATTTTCGCCATCCACGGCATAGTCGCCACGCCAACCAGTAGCAGGCCGATTATCTCAACGCTAAAGCAAATCATCGCTACGTTTAAGCCACCGATACGGTTAATGCCGTTAGGGAATAACAAACGCGTACCGACAAACGCACAGCTa < 1:4015773/150‑1 (MQ=255) gATTTTCGCCATCCACGGCATAGTCGCCACGCCAACCAGTAGCAGGCCGATTATCTCAACGCTAAAGCAAATCATCGCTACGTTTAAGCCACCGATACGGTTAATGCCGTTAGGGAATAACAAACGCGTACCGACAAACGCACAGCTaaa > 1:4821642/1‑150 (MQ=255) aTTTTCGCCATCCACGGCATAGTCGCCACGCCAACCAGTAGCAGGCCGATTATCTCAACGCTAAAGCAAATCATCGCTACGTTTAAGCCACCGATACGGTTAATGCCGTTAGGGAATAACAAACGCGTACCGACAAACGCACAGCTAAAc < 2:2865023/150‑1 (MQ=255) tttCGCCATCCACGGCATAGTCGCCACGCCAACCAGTAGCAGGCCGATTATCTCAACGCTAAAGCAAATCATCGCTACGTTTAAGCCACCGATACGGTTAATGCCGTTAGGGAATAACAAACGCGTACCGACAAACGCACAGCTAAACAg > 1:3344288/1‑150 (MQ=255) tttCGCCATCCACGGCATAGTCGCCACGCCAACCAGTAGCAGGCCGATTATCTCAACGCTAAAGCAAATCATCGCTACGTTTAAGCCACCGATACGGTTAATGCCGTTAGGGAATAACAAACGCGTACCGACAAACGCACAGCTAAACAg < 2:1850163/150‑1 (MQ=255) tCGCCATCCACGGCATAGTCGCCACGCCAACCAGTAGCAGGCCGATTATCTCAACGCTAAAGCAAATCATCTCTACGTTTAAGCCACCGATACGGTTAATGCCGTTAGGGAATAACAAACGCGTACCGACAAACGCACAGCTAAACAGCg < 2:2254471/150‑1 (MQ=255) tCGCCATCCACGGCATAGTCGCCACGCCAACCAGTAGCAGGCCGATTATCTCAACGCTAAAGCAAATCATCGCTACGTTTAAGCCACCGATACGGTTAATGCCGTTAGGGAATAACAAACGCGTACCGACAAACGCACAGCTAAACAGCg < 2:3739342/150‑1 (MQ=255) gCCATCCACGGCATAGTCGCCACGCCAACCAGTAGCAGGCCGATTATCTCAACGCTAAAGCAAATCATCGCTACGTTTAAGCCACCGATACGGTTAATGCCGTTAGGGAATAACAAACGCGTACCGACAAACGCACAGCTAAACAGCGTc > 1:4092837/1‑150 (MQ=255) gCCATCCACGGCATAGTCGCCACGCCAACCAGTAGCAGGCCGATTATCTCAACGCTAAAGCAAATCATCGCTACGTTTAAGCCACCGATACGGTTAATGCCGTTAGGGAATAACAAACGCGTACAGACAAACGCACAGCTAAACAGCGTc < 2:124217/150‑1 (MQ=255) ccATCCACGGCATAGTCGCCACGCCAACCAGTAGCAGGCCGATTATCTCAACGCTAAAGCAAATCATCGCTACGTTTAAGCCACCGATACGGTTAATGCCGTTAGGGAATAACAAACGCGTACCGACAAACGCACAGCTAAACAGCGTCa > 1:3707133/1‑150 (MQ=255) ccACGGCATAGTCGCCACGCCAACCAGTAGCAGGCCGATTATCTCAACGCTAAAGCAAATCATCGCTACGTTTAAGCCACCGATACGGTTAATGCCGTTAGGGAATAACAAACGCGTACCGACAAACGCACAGCTAAACAGCGTCAgcgc < 1:4264545/150‑1 (MQ=255) cGGCATAGTCGCCACGCCAACCAGTAGCAGGCCGATTATCTCAACGCTAAAGCAAATCATCGCTACGTTTAAGCCACCGATACGGTTAATGCCGTTAGGGAATAACAAACGCGTACCGACAAACGCACAGCTAAACAGCGTCAGCGCGaa > 1:1940899/1‑150 (MQ=255) ggCATAGTCGCCACGCCAACCAGTAGCAGGCCGATTATCTCAACGCTAAAGCAAATCATCGCTACGTTTAAGCCACCGATACGGTTAATGCCGTTAGGGAATAACAAACGCGTACCGACAAACGCACAGCTAAACAGCGTCAGCGCGaaa < 1:15744/150‑1 (MQ=255) ggCATAGTCGCCACGCCAACCAGTAGCAGGCCGATTATCTCAACGCTAAAGCAAATCATCGCTACGTTTAAGCCACCGATACGGTTAATGCCGTTAGGGAATAACAAACGCGTACAGACAAACGCACAGCTAAACAGCGTCAGCGCGaaa > 1:3287476/1‑150 (MQ=255) cgccacgccaACCAGTAGCAGGCCGATTATCTCAACGCTAAAGCAAATCATCGCTACGTTTAAGCCACCGATACGGTTAATGCCGTTAGGGAATAACAAACGCGTACCGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCAcc > 1:2725784/1‑150 (MQ=255) gccacgccaACCAGTAGCAGGCCGATTATCTCAACGCTAAAGCAAATCATCGCTACGTTTAAGCCACCGATACGGTTAATGCCGTTAGGGAATAACAAACGCGTACCGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCACCg > 1:3472632/1‑150 (MQ=255) gccacgccaACCAGTAGCAGGCCGATTATCTCAACGCTAAAGCAAATCATCGCTACGTTTAAGCCACCGATACGGTTAATGCCGGTAGGGAATAACAAACGCGTACCGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCACCg > 2:3916828/1‑150 (MQ=255) gccaACCAGTAGCAGGACGATTATCTCAACGCTAAAGCAAATCATCGCTACGTTTAAGCCACCGATACGGTTAATGCCGTTAGGGAATAACAAACGCGTACCGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCACCGTCCCa > 1:932336/1‑150 (MQ=255) ccaACCAGTAGCAGGCCGATTATCTCAACGCTAAAGCAAATCATCGCTACGTTTAAGCCACCGATACGGTTAATGCCGTTAGGGAATAACAAACGCGTACCGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCACCGTCCCaa > 1:506389/1‑150 (MQ=255) caACCAGTAGCAGGCCGATTATCTCAACGCTAAAGCAAATCATCGCTACGTTTAAGCCACCGATACGGTTAATGCCGTTAGGGAATAACAAACGCGTACCGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCACCGTCCCAAc > 2:395635/1‑150 (MQ=255) ccAGTAGCAGGCCGATTATCTCAACGCTAAAGCAAATCATCGCTACGTTTAAGCCACCGATACGGTTAATGCCGTTAGGGAATAACAAACGCGTACCGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCACCGTCCCAACCtt < 2:893689/150‑1 (MQ=255) cAGTAGCAGGCCGATTATCTCAACGCTAAAGCAAATCATCGCTACGTTTAAGCCACCGATACGGTTAATGCCGTTAGGGAATAACAAACGCGTACCGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCACCGTCCCAACCttt < 1:1698807/150‑1 (MQ=255) gCAGGCCGATTATCTCAACGCTAAAGCAAATCATCGCTACGTTTAAGCCACCGATACGGTTAATGCCGTTAGGGAATAACAAACGCGTACAGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCACCGTCCCAACCTTTAGCGt < 1:3200626/150‑1 (MQ=255) ggCCGATTATCTCAACGCTAAAGCAAATCATCGCTACGTTTAAGCCACCGATACGGTTAATGCCGTTAGGGAATAACAAACGCGTACCGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCACCGTCCCAACCTTTAGCGTCAt > 2:4452793/1‑150 (MQ=255) ggCCGATTATCTCAACGCTAAAGCAAATCATCGCTACGTTTAAGCCACCGATACGGTTAATGCCGTTAGGGAATAACAAACGCGTACCGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCACCGTCCCAACCTTTAGCGTCAt > 1:2451870/1‑150 (MQ=255) ggCCGATTATCTCAACGCTAAAGCAAATCATCGCTACGTTTAAGCCACCGATACGGTTAATGCCGTTAGGGAATAACAAACGCGTACCGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCACCGTCCCAACCTTTAGCGTCAt > 1:621678/1‑150 (MQ=255) cGATTATCTCAACGCTAAAGCAAATCATCGCTACGTTTAAGCCACCGATACGGTTAATGCCGTTAGGGAATAACAAACGCGTACCGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCACCGTCCCAACCTTTAGCGTCATaaa > 1:4309800/1‑150 (MQ=255) cGATTATCTCAACGCTAAAGCAAATCATCGCTACGTTTAAGCCACCGATACGGTTAATGCCGTTAGGGAATAACAAACGCGTACCGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCACCGTCCCAACCTATAGCGTCATaaa > 1:4875414/1‑150 (MQ=255) gATTATCTCAACGCTAAAGCAAATCATCGCTACGTTTAAGCCACCGATACGGTTAATGCCGTTAGGGAATAACAAACGCGTACCGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCACCGTCCCAACCTTTAGCGTCATaaaa > 2:2323001/1‑150 (MQ=255) ttctaAACGATAAAGCAAATCATCGCTACGTTTAAGCCACCGATACGGTTAATGACGTTAGGGAATAACAAACGCGTACCGACAAACTCACATCTAAACAGCGTCAGCGCGAAAGCCGCACCGTCCCAACCTTTAGCGTCATAAAACAGc < 2:661161/149‑1 (MQ=255) aTCTCAACGCTAAAGCAAATCATCGCTACGTTTAAGCCACCGATACGGTTAATGCCGTTAGGGAATAACAAACGCGTACCGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCACCGTCCCAACCTTTAGCGTCATAAAACAGc < 2:2489231/150‑1 (MQ=255) tctcAACGCTAAAGCAAATCATCGCTACGTTTAAGCCACCGATACGGTTAATGCCGTTAGGGAATAACAAACGCGTACCGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCACCGTCCCAACCTTTAGCGTCATAAAACAGCg > 1:2155694/1‑150 (MQ=255) ctcAACGCTAAAGCAAATCATCGCTACGTTTAAGCCACCGATACGGTTAATGCCGTTAGGGAATAACAAACGCGTACCGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCACCGTCCCAACCTTTAGCGTCATAAAACAGCGt < 2:1410363/150‑1 (MQ=255) cAACGCTAAAGCAAATCATCGCTACGTTTCAGCCACCGATACGGTTAATGCCGTTAGGGAATAACAAACGCGTACCGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCACCGTCCCAACCTTTAGCGTCATAAAACAGCGTGa > 2:3562432/1‑150 (MQ=255) cAACGCTAAAGCAAATCATCGCTACGTTTAAGCCACCGATACGGTTAATGCCGTTAGGGAATAACAAACGCGTACCGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCACCGTCCCAACCTTTAGCGTCATAAAACAGCGTGa < 1:256563/150‑1 (MQ=255) aaCGCTAAAGCAAATCATCGCTACGTTTAAGCCACCGATACGGTTAATGCCGTTAGGGAATAACAAACGCGTACCGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCACCGTCCCAACCTTTAGCGTCATAAAACAGCGTGAt > 1:2367525/1‑150 (MQ=255) cTAAAGCAAATCATCGCTACGTTTAAGCCACCGATACGGTTAATGCCGTTAGGGAATAACAAACGCGTACCGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCACCGTCCCAACCTTTAGCGTCATAAAACAGCGTGATAAAg < 1:187774/150‑1 (MQ=255) aaaGCAAATCATCGCTACGTTTAAGCCACCGATACGGTTAATGCCGTTAGGGAATAACAAACGCGTACCGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCACCGTCCCAACCTTTAGCGTCATAAAACAGCGTGATAAAGGt > 2:3776262/1‑150 (MQ=255) gaaaaTCATCGCTACGTTTAAGCCACCGATACGGTTAATGCCGTTAGGGAATAACAAACGCGTACCGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCACCGTCCCAACCTTTAGCGTCATAAAACAGCGTGATAAAGGTGGc > 2:3146089/3‑150 (MQ=255) gCAAATCATCGCTACGTTTAAGCCACCGATACGGTTAATGCCGTTAGGGAATAACAAACGCGTACCGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCACCGTCCCAACCTTTAGCGTCATAAAACAGCGTGATAAAGGTGGc > 2:2953228/1‑150 (MQ=255) gCAAATCATCGCTACGTTTAAGCCACCGATACGGTTAATGCCGTTAGGGAATAACAAACGCGTACCGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCACCGTCCCAACCTTTAGCGTCATAAAACAGCGTGATAAAGGTGGc > 2:2691008/1‑150 (MQ=255) gCAAATCATCGCTACGTTTAAGCCACCGATACGGTTAATGCCGTTAGGGAATAACAAACGCGTACCGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCACCGTCCCAACCTTTAGCGTCATAAAACAGCGTGATAAAGGTGGc > 1:4128315/1‑150 (MQ=255) aaaTCATCGCTACGTTTAAGCCACCGATACGGTTAATGCCGTTAGGGAATAACAAACGCGTACCGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCACCGTCCCAACCTTTAGCGTCATAAAACAGCGTGATAAAGGTGGCGa > 2:558180/1‑150 (MQ=255) aaTCATCGCTACGTTTAAGCCACCGATACGGTTAATGCCGTTAGGGAATAACAAACGCGTACCGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCACCGTCCCAACCTTTAGCGTCATAAAACAGCGTGATAAAGGTGGCGAt < 1:3938030/150‑1 (MQ=255) aaTCATCGCTACGTTTAAGCCACCGATACGGTTAATGCCGTTAGGGAATAACAAACGCGTACCGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCACCGTCCCAACCTTTAGCGTCATAAAACAGCGTGATAAAGGTGGCGAt > 1:3568808/1‑150 (MQ=255) tcatcGCTACGTTTAAGCCACCGATACGGTTAATGCCGTTAGGGAATAACAAACGCGTACCGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCACCGTCCCAACCTTTAGCGTCATAAAACAGCGTGATAAAGGTGGCGATGa > 2:4634201/1‑150 (MQ=255) catcGCTACGTTTAAGCCACCGATACGGTTAATGCCGTTAGGGAATAACAAACGCGTACCGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCACCGTCCCAACCTTTAGCGTCATAAAACAGCGTGATAAAGGTGGCGATGAc > 1:2215643/1‑150 (MQ=255) tgCTACGTTTAAGCCACCGATACGGTTAATGCCGTTAGGGAATAACAAACGCGTACCGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCACCGTCCCAACCTTTAGCGTCATAAAACAGCGTGATAAAGGTGGCGATGACGcc > 1:1345590/2‑150 (MQ=255) cGCTACGTTTAAGCCACCGATACGGTTAATGCCGTTAGGGAATAACAAACGCGTACCGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCACCGTCCCAACCTTTAGCGTCATAAAACAGCGTGATAAAGGTGGCGATGACGcc < 1:3316550/150‑1 (MQ=255) cGCTACGTTTAAGCCACCGATACGGTTAATGCCGTTAGGGAATAACAAACGCGTACCGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCACCGTCCCAACCTTTAGCGTCATAAAACAGCGTGATAAAGGTGGCGATGACGcc > 2:5125125/1‑150 (MQ=255) gCTACGTTTAAGCCACCGATACGGTTAATGCCGTTAGGGAATAACAAACGCGTACCGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCACCGTCCCAACCTTTAGCGTCATAAAACAGCGTGATAAAGGTGGCGATGACGCCa > 1:1084076/1‑150 (MQ=255) cTACGTTTAAGCCACCGATACGGTTAATGCCGTTAGGGAATAACAAACGCGTACCGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCACCGTCCCAACCTTTAGCGTCATAAAACAGCGTGATAAAGGTGGCGATGACGCCaa < 1:4454085/150‑1 (MQ=255) aCGTTTAAGCCACCGATACGGTTAATGCCGTTAGGGAATAACAAACGCGTACCGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCACCGTCCCAACCTTTAGCGTCATAAAACAGCGTGATAAAGGTGGCGATGACGCCAAAt < 1:2804662/150‑1 (MQ=255) ttAAGCCACCGATACGGTTAATGCCGTTAGGGAATAACAAACGCGTACCGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCACCGTCCCAACCTTTAGCGTCATAAAACAGCGTGATAAAGGTGGCGATGACGCCAAATCcgg > 2:3256596/1‑150 (MQ=255) aGCCACCGATACGGTTAATGCCGTTAGGGAATAACAAACGCGTACCGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCACCGTCCCAACCTTTAGCGTCATAAAACAGCGTGATAAAGGTGGCGATGACGCCAAATCcggcgg > 2:4724892/1‑150 (MQ=255) gCCACCGATACGGTTAATGCCGTTAGGGAATAACAAACGCGTACAGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCACCGTCCCAACCTTTAGCGTCATAAAACAGCGTGATAAAGGTGGCGATGACGCCAAATCCGGCGGa < 2:3510083/150‑1 (MQ=255) ccACCGATACGGTTAATGCCGTTAGGGAATAACAAACGCGTACCGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCACCGTCCCAACCTTTAGCGTCATAAAACAGCGTGATAAAGGTGGCGATGACGCCAAATCCGGCGGaa > 2:1600651/1‑150 (MQ=255) ccACCGATACGGTTAATGCCGTTAGGGAATAACAAACGCGTACCGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCACCGTCCCAACCTTTAGCGTCATAAAACAGCGTGATAAAGGTGGCGATGACGCCAAATCCGGCGGaa > 2:134653/1‑150 (MQ=255) cACCGATACGGTTAATGCCGTTAGGGAATAACAAACGCGTACCGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCACCGTCCCAACCTTTAGCGTCATAAAACAGCGTGATAAAGGTGGCGATGACGCCAAATCCGGCGGAAg > 1:4166073/1‑150 (MQ=255) cACCGATACGGTTAATGCCGTTAGGGAATAACAAACGCGTACAGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCACCGTCCCAACCTTTAGCGTCATAAAACAGCGTGATAAAGGTGGCGATGACGCCAAATCCGGCGGAAg < 2:2632239/150‑1 (MQ=255) cGATACGGTTAATGCCGTTAGGGAATAACAAACGCGTACCGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCACCGTCCCAACCTTTAGCGTCATAAACCAGCGTGATAAAGGTGGCGATGACGCCAAATCCGGCGGAAGCCa < 2:3464092/150‑1 (MQ=255) gTTAATGCCGTTAGGGAATAACAAACGCGTACCGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCACCGTCCCAACCTTTAGCGTCATAAAACAGCGTGATAAAGGTGGCGATGACGCCAAATCCGGCGGAAGCCAGTGCCAg < 2:299651/150‑1 (MQ=255) tactGCCGTTCGGGAATCACCAACGCGGACCGACAAACGCACAGCTCACCAGCGTCAGCGCGAAAGCCACACCGTCCCCACCTTTAGCGTCATCACACAGCGTGATAAAGGTGGCGCTGACGCCAAATCCGGCGGAAGCCAGTGCCAgcg < 2:2131606/147‑1 (MQ=255) tAATGCCGTTAGGGAATAACAAACGCGTACCGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCACCGTCCCAACCTTTAGCGTCATAAAACAGCGTGATAAAGGTGGCGATGACGCCAAATCCGGCGGAAGCCAGTGCCAgcg < 2:1679646/150‑1 (MQ=255) tAATGCCGTTAGGGAATAACAAACGCGTACCGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCACCGTCCCAACCTTTAGCGTCATAAAACAGCGTGATAAAGGTGGCGATGACGCCAAATCCGGCGGAAGCCAGTGCCAgcg > 2:2356379/1‑150 (MQ=255) aaTGCCGTTAGGGAATAACAAACGCGTACCGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCACCGTCCCAACCTTTAGCGTCATAAAACAGCGTGATAAAGGTGGCGATGACGCCAAATCCGGCGGAAGCCAGTGCCAgcgc > 1:1476826/1‑150 (MQ=255) aaTGCCGTTAGGGAATAACAAACGCGTACCGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCACCGTCCCAACCTTTAGCGTCATAAAACAGCGTGATAAAGGTGGCGATGACGCCAAATCCGGCGGAAGCCAGTGCCAgcgc < 1:3135273/150‑1 (MQ=255) ccGTTAGGGAATAACAAACGCGTACCGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCACCGTCCCAACCTTTAGCGTCATAAAACAGCGTGATAAAGGTGGCGATGACGCCAAATCCGGCGGAAGCCAGTGCCAGCGCCATa > 2:798737/1‑150 (MQ=255) cGTTAGGGAATAACAAACGCGTACCGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCACCGTCCCAACCTTTAGCGTCATAAAACAGCGTGATAAAGGTGGCGATGACGCCAAATCCGGCGGAAGCCAGTGCCAGCGCCATAc > 2:2782845/1‑150 (MQ=255) gTTAGGGAATAACAAACGCGTACCGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCACCGTCCCAACCTTTAGCGTCATAAAACAGCGTGATAAAGGTGGCGATGACGCCAAATCCGGCGGAAGCCAGTGCCAGCGCCATAcc < 1:1523075/150‑1 (MQ=255) gTTAGGGAATAACAAACGCGTACCGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCACCGTCCCAACCTTTAGCGTCATAAAACAGCGTGATAAAGGTGGCGATGACGCCAAATCCGGCGGAAGCCAGTGCCAGCGCCATAcc < 1:7283/150‑1 (MQ=255) tAGGGAATAACAAACGCGTACCGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCACCGTCCCAACCTTTAGCGTCATAAAACAGCGTGATAAAGGTGGCGATGACGCCAAATCCGGCGGAAGCCAGTGCCAGCGCCATACCGt > 1:779855/1‑150 (MQ=255) aGGGAATAACAAACGCGTACCGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCACCGTCCCAACCTTTAGCGTCATAAAACAGCGTGATAAAGGTGGCGATGACGCCAAATCCGGCGGAAGCCAGTGCCAGCGCCATACCGTa > 2:1017712/1‑150 (MQ=255) gggAATAACAAACGCGTACAGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCACCGTCCCAACCTTTAGCGTCATAAAACAGCGTGATAAAGGTGGCGATGACGCCAAATCCGGCGGAAGCCAGTGCCAGCGCCATACCGTAc > 2:715565/1‑150 (MQ=255) gAATAACAAACGCGTACCGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCACCGTCCCAACCTTTAGCGTCATAAAACAGCGTGATAAAGGTGGCGATGACGCCAAATCCGGCGGAAGCCAGTGCCAGCGCCATACCGTACAg < 1:2932141/150‑1 (MQ=255) aaTAACAAACGCGTACCGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCACCGTCCCAACCTTTAGCGTCATAAAACAGCGTGATAAAGGTGGCGATGACGCCAAATCCGGCGGAAGCCAGTGCCAGCGCCATACCGTACAGc > 1:39901/1‑150 (MQ=255) aaTAACAAACGCGTACCGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCACCGTCCCAACCTTTAGCGTCATAAAACAGCGTGATAAAGGTGGCGATGACGCCAAATCCGGCGGAAGCCAGTGCCAGCGCCATACCGTACAGc > 1:3026910/1‑150 (MQ=255) aTAACAAACGCGTACAGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCACCGTCCCAACCTTTAGCGTCATAAAACAGCGTGATAAAGGTGGCGATGACGCCAAATCCGGCGGAAGCCAGTGCCAGCGCCATACCGTACAGcc > 1:1667818/1‑150 (MQ=255) aaCAAACGCGTACCGACAAACGCACAGCTAAACAGCGTCAGCTCGAAAGCCGCACCGTCCCAACCTTTAGCGTCATAAAACAGCGTGATAAAGGTGGCAATGACGCCAAATCCGGCTGAAGCCAGTGCCAGCGCCATACCGTACAGCCAg > 1:1746293/1‑150 (MQ=255) aaCAAACGCGTACCGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCACCGTCCCAACCTTTAGCGTCATAAAACAGCGTGATAAAGGTGGCGATGACGCCAAATCCGGCGGAAGCCAGTGCCAGCGCCATACCGTACAGCCAg < 1:539930/150‑1 (MQ=255) aaCAAACGCGTACCGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCACCGTCCCAACCTTTAGCGTCATAAAACAGCGTGATAAAGGTGGCGATGACGCCAAATCCGGCGGAAGCCAGTGCCAGCGCCATACCGTACAGCCAg < 2:4821705/150‑1 (MQ=255) aCAAACGCGTACCGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCACCGTCCCAACCTTTAGCGTCATAAAACAGCGTGATAAAGGTGGCGATGACGCCAAATCCGGCGGAAGCCAGTGCCAGCGCCATACCGTACAGCCAGa < 1:2323001/150‑1 (MQ=255) cAAACGCGTACCGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCACCGTCCCAACCTTTAGCGTCATAAAACAGCGTGATAAAGGTGGCGATGACGCCAAATCCGGCGGAAGCCAGTGCCAGCGCCATACCGTACAGCCAGAc < 1:1640960/150‑1 (MQ=255) cAAACGCGTACCGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCACCGTCCCAACCTTTAGCGTCATAAAACAGCGTGATAAAGGTGGCGATGACGCCAAATCCGGCGGAAGCCAGTGCCAGCGCCATACCGTACAGCCAGAc > 2:3296530/1‑150 (MQ=255) aaaCGCGTACCGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCACCGTCCCAACCTTTAGCGTCATAAAACAGCGTGATAAAGGTGGCGATGACGCCAAATCCGGCGGAAGCCAGTGCCAGCGCCATACCGTACAGCCAGAcg > 1:4625727/1‑150 (MQ=255) cgTACCGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCACCGTCCCAACCTTTAGCGTCATAAAACAGCGTGATAAAGGTGGCGATGACGCCAAATCCGGCGGAAGCCAGTGCCCGCGCCATACCGTACCGCCAGACGCGccc > 1:4838917/1‑150 (MQ=255) gTACCGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCACCGTCCCAACCTTTAGCGTCATAAAACAGCGTGATAAAGGTGGCGATGACGCCAAATCCGGCGGAAGCCAGTGCCAGCGCCATACCGTACAGCCAGACGCGCCCa < 2:4232645/150‑1 (MQ=255) tACAGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCACCGTCCCAACCTTTAGCGTCATAAAACAGCGTGATAAAGGTGGCGATGACGCCAAATCCGGCGGAAGCCAGTGCCAGCGCCATACCGTACAGCCAGACGCGCCCaa < 2:1997120/150‑1 (MQ=255) cGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCACCGTCCCAACCTTTAGCGTCATAAAACAGCGTGATAAAGGTGGCGATGACGCCAAATCCGGCGGAAGCCAGTGCCAGCGCCATACCGTACAGCCAGACGCGCCCAAGCa < 1:3800764/150‑1 (MQ=255) cGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCACCGTCCCAACCTTTAGCGTCATAAAACAGCGTGATAAAGGTGGCGATGACGCCAAATCCGGCGGAAGCCAGTGCCAGCGCCATACCGTACAGCCAGACGCGCCCAAGCa > 2:313018/1‑150 (MQ=255) | CCCCGCCAGTAAGACGCCGATTTTCGCCATCCACGGCATAGTCGCCACGCCAACCAGTAGCAGGCCGATTATCTCAACGCTAAAGCAAATCATCGCTACGTTTAAGCCACCGATACGGTTAATGCCGTTAGGGAATAACAAACGCGTACCGACAAACGCACAGCTAAACAGCGTCAGCGCGAAAGCCGCACCGTCCCAACCTTTAGCGTCATAAAACAGCGTGATAAAGGTGGCGATGACGCCAAATCCGGCGGAAGCCAGTGCCAGCGCCATACCGTACAGCCAGACGCGCCCAAGCA > CP009273/3604149‑3604447 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |