| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,638,641 | C→A | 100% | intergenic (‑99/‑104) | prlC ← / → rlmJ | oligopeptidase A/23S rRNA m(6)A2030 methyltransferase, SAM‑dependent |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,638,641 | 0 | C | A | 98.2% | 1106.6 / 6.2 | 341 | intergenic (‑99/‑104) | prlC/rlmJ | oligopeptidase A/23S rRNA m(6)A2030 methyltransferase, SAM‑dependent |
| Reads supporting (aligned to +/- strand): ref base C (2/4); new base A (152/183); total (154/187) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.94e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.63e-01 | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 344 total aligned reads displayed.
TTAGAAAACGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAACGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTACCCATGCTCAGTTATCGCCACAGCTTTCACGCTGGCAACCACGCCG > CP009273/3638496‑3638787 | ttAGAAAACGGAGGCAATTCAAAGTGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTa < 2:1552312/150‑1 (MQ=255)ttAGAAAACGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTa < 1:3184750/150‑1 (MQ=255) tAGAAAACGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATCATGTGTGTAGCATGGGGTTAAGTGGAGTGACTTTCAATGAGAAAAGTTAc > 2:304111/1‑150 (MQ=255) tAGAAAACGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTAc < 1:5086071/150‑1 (MQ=255) tAGAAAACGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTAc > 1:1907434/1‑150 (MQ=255) aGAAAACGGAGTCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGCAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCAAGGGGTTAACTCTAGTGAATATCAATGAGAAAAGTTACg > 2:5051078/1‑150 (MQ=255) gAAAACGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGc > 1:3444364/1‑150 (MQ=255) aacaCGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCt < 2:2867200/147‑1 (MQ=255) aaCGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCttt > 2:1731735/1‑150 (MQ=255) cGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTcg < 1:1489030/150‑1 (MQ=255) cGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTcg < 1:3923628/150‑1 (MQ=255) ggCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCgcggc < 1:1845740/150‑1 (MQ=255) gCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAACGTTACGCTTTCgcggcg > 2:3523896/1‑150 (MQ=255) aaTTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCgcggcggc < 2:4283869/150‑1 (MQ=255) tCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCggcggcggc < 1:656550/150‑1 (MQ=255) aaaGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCct > 2:3414219/1‑150 (MQ=255) aaaGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCct < 1:4569488/150‑1 (MQ=255) aaGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCctc > 2:332150/1‑150 (MQ=255) ggAGTCAGTACCGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGATAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCttt < 1:2937322/150‑1 (MQ=255) ggAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCttt < 1:2474010/150‑1 (MQ=255) gAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCtttt < 2:87825/150‑1 (MQ=255) gAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCtttt < 1:114191/150‑1 (MQ=255) aGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTc < 1:3825220/150‑1 (MQ=255) cAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGt < 1:2134136/150‑1 (MQ=255) aGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTATGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGta > 1:1614286/1‑150 (MQ=255) aGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGta > 1:364623/1‑150 (MQ=255) gTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGtat > 1:352009/1‑150 (MQ=255) aCGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACt > 1:437468/1‑150 (MQ=255) aCGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACt < 1:1363890/150‑1 (MQ=255) cGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAACGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTg < 2:446720/150‑1 (MQ=255) ggATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGt > 1:4013672/1‑150 (MQ=255) gATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAACGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTc > 1:3077036/1‑150 (MQ=255) gATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTc > 2:239218/1‑150 (MQ=255) tCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTg < 2:1259912/150‑1 (MQ=255) cGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGa < 1:527754/150‑1 (MQ=255) cATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATAc < 1:2177979/150‑1 (MQ=255) agtCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACg < 2:269684/148‑1 (MQ=255) cgcgCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCtt < 2:3694858/150‑1 (MQ=255) cAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTtgt < 1:425825/150‑1 (MQ=255) gTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTgc > 2:2764148/1‑150 (MQ=255) tCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTgcg > 2:1380944/1‑150 (MQ=255) ccTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTgcgc > 1:4940050/1‑150 (MQ=255) cTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGcc < 1:4133185/150‑1 (MQ=255) ggTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATACTGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGcccc < 2:4954210/150‑1 (MQ=255) aaaGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAAt > 2:3232971/1‑150 (MQ=255) ggTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACggg > 1:3786208/1‑150 (MQ=255) gTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTATCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGc > 1:1041201/1‑150 (MQ=255) aaGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGa < 2:1615234/150‑1 (MQ=255) aGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGAt < 2:4371577/150‑1 (MQ=255) aGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGAt < 2:697338/150‑1 (MQ=255) aGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGAt < 2:4862453/150‑1 (MQ=255) gAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGAttt > 1:1708886/1‑150 (MQ=255) gAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGAttt > 1:2216063/1‑150 (MQ=255) gAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGAttt > 1:4283673/1‑150 (MQ=255) gAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGAttt < 1:3665785/150‑1 (MQ=255) aaGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGAtttt > 2:2201195/1‑150 (MQ=255) gcgcTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTtta < 1:1184783/150‑1 (MQ=255) gcgcTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTATCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTtta > 1:3387109/1‑150 (MQ=255) cgcTCAACAGGCGCTGTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGCTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTttac < 1:4823514/150‑1 (MQ=255) gcTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTttact < 2:4931658/150‑1 (MQ=255) cTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTttactt < 2:2498883/150‑1 (MQ=255) tCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTttactta > 2:4007000/1‑150 (MQ=255) tCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTttactta > 2:1992176/1‑150 (MQ=255) tCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTttactta < 1:4831816/150‑1 (MQ=255) aaCAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTAcc < 2:1038001/150‑1 (MQ=255) cAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTGTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGCATACGGGCCGATTTTTACTTACCgg > 2:228906/1‑150 (MQ=255) aGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGa > 1:4998664/1‑150 (MQ=255) cgcTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAaca < 1:849625/150‑1 (MQ=255) tttACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCt > 2:827263/1‑150 (MQ=255) ttACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCtt > 2:1059913/1‑150 (MQ=255) aCATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTa < 1:1992176/150‑1 (MQ=255) cATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTAc < 1:2108290/150‑1 (MQ=255) cATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTAc > 1:2027293/1‑150 (MQ=255) attaTGTGTGGAGCATGGGGTTTAGGGTTGTGTATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTAcc < 2:4277581/147‑1 (MQ=255) gtgtgtAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGTCCGATTTTTACTTACCGGAACACCTTTACCCATGc < 1:2355345/150‑1 (MQ=255) tgtgtAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTACCCATGCt < 1:1337764/150‑1 (MQ=255) gtgtAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTACCCATGCTc < 2:638830/150‑1 (MQ=255) gtAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTACCCATGCTCAg > 2:3864058/1‑150 (MQ=255) tAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTACCCATGCTCAGt > 1:277888/1‑150 (MQ=255) gCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGCCCGATTTTTACTTACCGGAACACCTTTACCCATGCTCAGTTa < 1:2700072/150‑1 (MQ=255) aTGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTACCCATGCTCAGTTATc > 2:4730824/1‑150 (MQ=255) tGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTACCCATGCTCAGTTATCg < 2:3444564/150‑1 (MQ=255) tGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTACCCATGCTCAGTTATCg < 1:2438168/150‑1 (MQ=255) ggggTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTACCCATGCTCAGTTATCGc > 2:5129947/1‑150 (MQ=255) gTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTACCCATGCTCAGTTATCGCcac > 1:924154/1‑150 (MQ=255) ttAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATCTTTACTTACCGGAACACCTTTACCCATGCTCAGTTATCGCcaca < 1:3220848/150‑1 (MQ=255) aaGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTACCCATGCTCAGTTATCGCCACAGc > 1:4513870/1‑150 (MQ=255) aGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTACCCATGCTCAGTTATCGCCACAGCt > 2:3533792/1‑150 (MQ=255) aGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTACCCATGCTCAGTTATCGCCACAGCt > 2:4517415/1‑150 (MQ=255) tAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTACCCATGCTCAGTTATCGCCACAGCTTTCa > 1:3243399/1‑150 (MQ=255) ttCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTACCCATGCTCAGTTATCGCCACAGCTTTCACGCTGGCa < 1:3722894/150‑1 (MQ=255) cAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTACCCATGCTCAGTTATCGCCACAGCTTTCACGCTGGCAAc < 2:1117848/150‑1 (MQ=255) cAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTACCCATGCTCAGTTATCGCCACAGCTTTCACGCTGGCAAc > 2:1470970/1‑150 (MQ=255) cAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTACCCATGCTCAGTTATCGCCACAGCTTTCACGCTGGCAAc > 1:4698092/1‑150 (MQ=255) aaTGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTACCCATGCTCAGTTATCGCCACAGCTTTCACGCTGGCAAcc > 2:3840336/1‑150 (MQ=255) tGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTACCCATGCTCAGTTATCGCCACAGCTTTCACGCTGGCAACCAc > 2:132542/1‑150 (MQ=255) gagaAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTACCCATGCTCAGTTATCGCCACAGCTTTCACGCTGGCAACCACg > 2:2917705/1‑150 (MQ=255) agaAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTACCCATGCTCAGTTATCGCCACAGCTTTCACGCTGGCAACCACGc > 2:4096053/1‑150 (MQ=255) aaaaGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTACCCATGCTCAGTTATCGCCACAGCTTTCACGCTGGCAACCACGCCg < 2:4146585/150‑1 (MQ=255) aaaaGTGACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTACCCATGCTCAGTTATCGCCACAGCTTTCACGCTGGCAACCACGCCg < 1:2653790/150‑1 (MQ=255) | TTAGAAAACGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAACGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTACCCATGCTCAGTTATCGCCACAGCTTTCACGCTGGCAACCACGCCG > CP009273/3638496‑3638787 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |