| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,711,448 | T→A | 13.3% | L260Q (CTG→CAG) | ghrB → | glyoxylate/hydroxypyruvate reductase B |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,711,448 | 0 | T | A | 13.3% | 838.2 / 88.5 | 295 | L260Q (CTG→CAG) | ghrB | glyoxylate/hydroxypyruvate reductase B |
| Reads supporting (aligned to +/- strand): ref base T (146/109); new base A (26/14); total (172/123) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.92e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 303 total aligned reads displayed.
AACTGATGAGACGCATCATCTGTTTGGCGCAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAGTACCGCATATTGGATCTGCCACCCATGAGACGCGTTATGGCATGGCCGCCTGTGCCGTGGATAATTTGATTGATGCGTTAC > CP009273/3711299‑3711597 | aaCTGATGAGACGCATCATCTGTTTGGCGCAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCt > 1:4795508/1‑150 (MQ=255)aaCTGATGAGACGCATCATCTGTTTGGCGCAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCt > 1:157807/1‑150 (MQ=255) aCTGATGAGACGCATCATCTGTTTGGCGCAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTg < 1:4616298/150‑1 (MQ=255) aCTGATGAGACGCATCATCTGTTTGGCGCAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTg < 2:1621397/150‑1 (MQ=255) aCTGATGAGACGCATCATCTGTTTGGCGCAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTg < 1:30650/150‑1 (MQ=255) gatgaGACGCATCATCTGTTTGGCGCAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGAt < 1:2717001/150‑1 (MQ=255) atgaGACGCATCATCTGTTTGGCGCAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATg < 2:189380/150‑1 (MQ=255) atgaGACGCATCATCTGTTTGGCGCAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATg < 2:3721110/150‑1 (MQ=255) agaCGCATCATCTGTTTGGCGCAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCt > 2:3650320/1‑150 (MQ=255) agaCGCATCATCTGTTTGGCGCAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCAGGATGTCt > 2:833905/1‑150 (MQ=255) gCATCATCTGTTTGGCGCAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCAGGATGTCTTCGa > 2:4418217/1‑150 (MQ=255) catcatCTGTTTGGCGCAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGaa < 1:3797039/150‑1 (MQ=255) tcatcTGTTTGGCGCAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACa < 1:1252013/150‑1 (MQ=255) tcTGTTTGGCGCAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAaga > 2:4079469/1‑150 (MQ=255) cTGTTTGGCGCAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAagag < 2:2751268/150‑1 (MQ=255) tGTTTGGCGCAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGc > 2:3432854/1‑150 (MQ=255) tGTTTGGCGCAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGc > 1:4060204/1‑150 (MQ=255) tttGGCGCAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCa < 2:1974756/150‑1 (MQ=255) gcgcAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGt < 1:703931/150‑1 (MQ=255) cgcAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTc > 2:3391324/1‑150 (MQ=255) gcAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCAGGATGTCTTCGAACAAGAGCCACTGTcc < 1:500185/150‑1 (MQ=255) aGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGt > 1:2447854/1‑150 (MQ=255) aaCAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAg > 1:3540083/1‑150 (MQ=255) aTTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTc < 2:450779/150‑1 (MQ=255) tCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAACGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGc < 2:421256/150‑1 (MQ=255) cGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGcc > 1:1096586/1‑150 (MQ=255) gCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCAGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCg > 2:1475503/1‑150 (MQ=255) cAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGTTGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGtt < 1:4492272/150‑1 (MQ=255) cAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCAGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGtt < 1:1434997/150‑1 (MQ=255) gAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCtctc > 1:3865838/1‑150 (MQ=255) aaaTCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCa < 1:4237068/150‑1 (MQ=255) taTCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCaa > 1:5141797/2‑150 (MQ=255) aaTCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCaa < 2:1653112/150‑1 (MQ=255) aaTCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCaa > 2:4974791/1‑150 (MQ=255) aaTCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCaa > 1:534697/1‑150 (MQ=255) tcctccGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATg < 2:1954934/150‑1 (MQ=255) cctccGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATgg < 1:1795900/150‑1 (MQ=255) cctccGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATgg < 1:4479513/150‑1 (MQ=255) cctccGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCAGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATgg < 2:3334580/150‑1 (MQ=255) ctccGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGc < 1:3706722/150‑1 (MQ=255) tccGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGcc < 2:4712884/150‑1 (MQ=255) gCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAAc > 2:5032896/1‑150 (MQ=255) ccATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAAcg < 2:1309615/150‑1 (MQ=255) aTTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAAcgtc < 2:899530/150‑1 (MQ=255) aTTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAAcgtc < 2:704184/150‑1 (MQ=255) aTTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCAGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAAcgtc < 2:1137376/150‑1 (MQ=255) ttttCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAAcgtcg < 2:4471092/150‑1 (MQ=255) ttCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACgtcgtc < 2:2854859/150‑1 (MQ=255) tCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGtcgtcg < 1:2711786/150‑1 (MQ=255) tGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAGTAcc > 1:2158859/1‑150 (MQ=255) cGGACGTTGCCCGGTGGTTGACGAAAATGCACAGATCGCAGCATAGCACAAAGGCGAAAATAACGCTGCAGGGCAGGATGTCTTAGACAACGAGCCACTGTACGTAGATTCTCCGTTGCTCTCAATGGCCAACGACGTCGAAgctcagca > 2:2667800/1‑143 (MQ=255) cGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAGTACCGCa > 2:2477660/1‑150 (MQ=255) ggACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAGTACCGCat > 2:3203387/1‑150 (MQ=255) cGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAGTACCGCAGAtt > 2:4562635/1‑150 (MQ=255) tGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAGTACCGCATATTgg > 1:3960017/1‑150 (MQ=255) tGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCAGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAGTACCGCATATTgg < 2:2171350/150‑1 (MQ=255) tggtTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAGTACCGCATATTGGATCTGCCa < 1:297270/150‑1 (MQ=255) ttGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAGTACCGCATATTGGATCTGCCAccc < 2:2304771/150‑1 (MQ=255) tNACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCAGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAGTACCGCATATTGGATCTGCCACCCa > 1:933703/1‑150 (MQ=255) tGACGAAAATGCACTGATCGCAGCATTGCAGAAAGTCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCACTGGCCAACGTCGTCGCAGTACCGCATATTGGATCTGCCACCCa < 1:610640/150‑1 (MQ=255) tGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAGTACCGCATATTGGATCTGCCACCCa > 1:2533148/1‑150 (MQ=255) tGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAGTACCGCATATTGGATCTGCCACCCa > 1:19675/1‑150 (MQ=255) tGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAGTACCGCATATTGGATCTGCCACCCa > 1:2332822/1‑150 (MQ=255) gACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAGTACCGCATATTGGATCTGCCACCCAt > 2:661987/1‑150 (MQ=255) aCGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAGTACCGCATATTGGATCTGCCACCCATg < 1:2619831/150‑1 (MQ=255) gCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAGTACCGCATATTGGATCTGCCACCCATGAGACGCGt > 1:149738/1‑150 (MQ=255) gCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCAGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAGTACCGCATATTGGATCTGCCACCCATGAGACGCGt > 1:3558259/1‑150 (MQ=255) cTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCAGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTACTCTCAATGGCCAACGTCGTCGCAGTACCGCATATTGGATCTGCCACCCATGAGACGCGTTat < 1:4367996/150‑1 (MQ=255) tGATCGCAGCATTGCAGACAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAGTACCGCATATTGGATCTGCCACCCATGAGACGCGTTatg < 2:2042508/150‑1 (MQ=255) gATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAGTACCGCATATTGGATCTGCCACCCATGAGACGCGTTatgg > 1:3009029/1‑150 (MQ=255) tCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAGTACCGCATATTGGATCTGCCACCCATGAGACGCGTTatggca > 2:2630894/1‑150 (MQ=255) tCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAGTACCGCATATTGGATCTGCCACCCATGAGACGCGTTatggca > 1:3215224/1‑150 (MQ=255) cGCAGCATTGCATAAAGGCGAAATTCACGCTGCCTGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAAAGGCCAACGTCGTCGCAGTACCGCATATTGGATCTGCCACCCATGAGACGCGTTatggcat > 2:211430/1‑150 (MQ=255) cGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAGTACCGCATATTGGATCTGCCACCCATGAGACGCGTTatggcat < 2:486519/150‑1 (MQ=255) cGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAGTACCGCATATTGGATCTGCCACCCATGAGACGCGTTatggcat > 1:1282698/1‑150 (MQ=255) agcaTTGCAGAAAGGCGAAATTCACGCTGCCGGGGTGGATTTCTTAGAACAAGAGCCACAGTCCGTAGATTCGCCGTTGCTCTAAAATGCCAACGTCGTCGCAGTAACGCCTATTTGATATGCCACCCATGAGACGCGTTatggcatggc > 2:406917/1‑150 (MQ=255) agcaTTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAGTACCGCATATTGGATCTGCCACCCATGAGACGCGTTatggcatggc > 1:3375322/1‑150 (MQ=255) agcaTTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAGTACCGCATATTGGATCTGCCACCCATGAGACGCGTTatggcatggc > 1:2295665/1‑150 (MQ=255) gcaTTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAGTACCGCATATTGGATCTGCCACCCATGAGACGCGTTATGGCATGgcc < 1:1728328/150‑1 (MQ=255) gcaTTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAGTACCGCATATTGGATCTGCCACCCATGAGACGCGTTATGGCATGgcc < 2:157807/150‑1 (MQ=255) gcaTTGCAGAAAGGCGAAATTCACGCTGCCGGGCAGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAGTACCGCATATTGGATCTGCCACCCATGAGACGCGTTATGGCATGgcc > 2:2246204/1‑150 (MQ=255) ttGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAGTACCGCATATTGGATCTGCCACCCATGAGACGCGTTATGGCATGgccgcc < 2:1010008/150‑1 (MQ=255) tGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAGTACCGCATATTGGATCTGCCACCCATGAGACGCGTTATGGCATGGCCGCCt < 1:1160255/150‑1 (MQ=255) gCAGAAAGGCGAAATTCACGCTGCCGGGCAGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAGTACCGCATATTGGATCTGCCACCCATGAGACGCGTTATGGCATGGCCGCCtg < 2:1780401/150‑1 (MQ=255) cAGAAAGGCGAAAGTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAGTACCGCATATTGGATCTGCCACCCATGAGACGCGTTATGGCATGGCCGCCtgt < 1:278248/150‑1 (MQ=255) aaaGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAGTACCGCATATTGGATCTGCCACCCATGAGACGCGTTATGGCATGGCCGCCTGTGcc < 2:291886/150‑1 (MQ=255) aaaGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAGTACCGCATATTGGATCTGCCACCCATGAGACGCGTTATGGCATGGCCGCCTGTGcc > 1:1683572/1‑150 (MQ=255) aaaGGCGAAATTCACGCTGCCGGGCAGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAGTACCGCATATTGGATCTGCCACCCATGAGACGCGTTATGGCATGGCCGCCTGTGcc < 2:1059662/150‑1 (MQ=255) aaGGCGAAATTCACGCTGCCGGGCAGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAGTACCGCATATTGGATCTGCCACCCATGAGACGCGTTATGGCATGGCCGCCTGTGCCg > 1:1196362/1‑150 (MQ=255) gAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAGTACCGCATATTGGATCTGCCACCCATGAGACGCGTTATGGCATGGCCGCCTGTGCCGTGGAt > 1:2434155/1‑150 (MQ=255) aaaTTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAGTACCGCATATTGGATCTGCCACCCATGAGACGCGTTATGGCATGGCCGCCTGTGCCGTGGATa > 1:1350609/1‑150 (MQ=255) ttCACGCTGCCGGGCAGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAGTACCGCATATTGGATCTGCCACCCATGAGACGCGTTATGGCATGGCCGCCTGTGCCGTGGATAAtt < 1:226307/150‑1 (MQ=255) cACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAGTACCGCATATTGGATCTGCCACCCATGAGACGCGTTATGGCATGGCCGCCTGTGCCGTGGATAATttg < 1:3644030/150‑1 (MQ=255) gCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAGTACCGCATATTGGATCTGCCACCCATGAGACGCGTTATGGCATGGCCGCCTGTGCCGTGGATAATttgatt < 2:3534925/150‑1 (MQ=255) cTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAGTACCGCATATTGGATCTGCCACCCATGAGACGCGTTATGGCATGGCCGCCTGTGCCGTGGATAATttgattg > 2:5161455/1‑150 (MQ=255) cTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAGTACCGCATATTGGATCTGCCACCCATGAGACGCGTTATGGCATGGCCGCCTGTGCCGTGGATAATttgattg > 2:3885279/1‑150 (MQ=255) ccGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAGTACCGCATATTGGATCTGCCACCCATGAGACGCGTTATGGCATGGCCGCCTGTGCCGTGGATAATTTGATTGATg < 1:4356395/150‑1 (MQ=255) cTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAGTACCGCATATTGGATCTGCCACCCATGAGACGCGTTATGGCATGGCCGCCTGTGCCGTGGATAATTTGATTGATGCGTTa > 1:329487/1‑150 (MQ=255) tGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAGTACCGCATATTGGATCTGCCACCCATGAGACGCGTTATGGCATGGCCGCCTGTGCCGTGGATAATTTGATTGATGCGTTAc > 1:3531014/1‑150 (MQ=255) tGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAGTACCGCATATTGGATCTGCCACCCATGAGACGCGTTATGGCATGGCCGCCTGTGCCGTGGATAATTTGATTGATGCGTTAc > 2:3043552/1‑150 (MQ=255) | AACTGATGAGACGCATCATCTGTTTGGCGCAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAGTACCGCATATTGGATCTGCCACCCATGAGACGCGTTATGGCATGGCCGCCTGTGCCGTGGATAATTTGATTGATGCGTTAC > CP009273/3711299‑3711597 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |