| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,716,114 | C→A | 5.3% | A548A (GCG→GCT) | glyS ← | glycine tRNA synthetase, beta subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,716,114 | 0 | C | A | 5.3% | 1110.1 / 21.7 | 298 | A548A (GCG→GCT) | glyS | glycine tRNA synthetase, beta subunit |
| Reads supporting (aligned to +/- strand): ref base C (153/129); new base A (6/10); total (159/139) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.08e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
Only 100 of 306 total aligned reads displayed.
CTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCAGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTGATACCAGGCGCGGAAGCGACCGAGCATAAAGTCGATAACATCATCAACTACGTTGGCATTAGTCAGCTTATCGCCATACAGACGCACCGCTTCTTCGGTCAGCGTTTGCAGATC > CP009273/3715965‑3716263 | cAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCAGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGc > 2:4991072/1‑150 (MQ=255) cAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCAGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGc > 2:3327444/1‑150 (MQ=255) aGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCAGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGcc > 1:2078868/1‑150 (MQ=255) aGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCAGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACAGcc > 1:4553908/1‑150 (MQ=255) gCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCAGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCt > 2:4538807/1‑150 (MQ=255) gCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCAGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCt < 2:2265952/150‑1 (MQ=255) gCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCAGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCt < 1:1539655/150‑1 (MQ=255) gCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCAGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCt < 1:5068489/150‑1 (MQ=255) gCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCAGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACAGCCt < 2:1641758/150‑1 (MQ=255) cACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCAGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTg > 2:3450389/1‑150 (MQ=255) cGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCAGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGGATgg > 2:3308133/1‑150 (MQ=255) gTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCAGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACAGCCTGGATGgt < 1:1617690/150‑1 (MQ=255) tCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCAGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGGATGgtg > 1:2192716/1‑150 (MQ=255) cAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCAGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGATGCGCCAGTACCGCCTGGATGgtgt > 2:3546209/1‑150 (MQ=255) gATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCAGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGGATGGTGTCa > 1:4204837/1‑150 (MQ=255) gATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCAGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGGATGGTGTCa > 2:2040293/1‑150 (MQ=255) gATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCAGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGGATGGTGTCa < 2:4375415/150‑1 (MQ=255) tCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCAGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGGATGGTGTCAACgg < 1:1025672/150‑1 (MQ=255) cGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCAGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGGATGGTGTCAACGGt > 2:4863792/1‑150 (MQ=255) ccAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCAGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGGATGGTGTCAACGGtat > 1:3187656/1‑150 (MQ=255) cAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCAGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACAGCCTGGATGGTGTCAACGGtata > 2:3678526/1‑150 (MQ=255) aGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCAGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGGATGGTGTCAACGGTATaa > 1:4585315/1‑150 (MQ=255) aaTGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCAGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGGATGGTGTCAACGGTATAAcc > 2:4552965/1‑150 (MQ=255) aTACACGTTTGTTCGCCGCCGCCAGTGCAGCAGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGGATGGTGTCAACGGTATAACCTTCGTCCt > 2:693712/1‑150 (MQ=255) aTACACGTTTGTTCGCCGCCGCCAGTGCAGCAGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACAGCCTGGATGGTGTCAACGGTATAACCTTCGTCCt < 2:3851489/150‑1 (MQ=255) tACACGTTTGTTCGCCGCCGCCAGTGCAGCAGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTg < 1:4679158/150‑1 (MQ=255) tACACGTTTGTTCGCCGCCGCCAGTGCAGCAGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTg < 1:3661316/150‑1 (MQ=255) cGTTTGTTCGCCGCCGCCAGTGCAGCAGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTGATAc < 2:359480/150‑1 (MQ=255) cGTTTGTTCGCCGCCGCCAGTGCAGCAGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTGATAc > 2:1148435/1‑150 (MQ=255) cGTTTGTTCGCCGCCGCCAGTGCAGCAGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTGATAc > 1:3788474/1‑150 (MQ=255) gTTTGTTCGCCGCCGCCAGTGCAGCAGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTGATAcc > 2:2553806/1‑150 (MQ=255) tttGTTCGCCGCCGCCAGTGCAGCAGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTGATACCa > 1:1322770/1‑150 (MQ=255) tCGCCGCCGCCAGTGCAGCAGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTGATACCAGgcgc > 1:35524/1‑150 (MQ=255) gccgccgccAGTGCAGCAGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTGATACCAGGCGCgg < 1:930629/150‑1 (MQ=255) cgccgccAGTGCAGCAGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTGATACCAGGCGCGGaa < 2:59992/150‑1 (MQ=255) cgccgccAGTGCAGCAGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACAGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTGATACCAGGCGCGGaa > 2:1085164/1‑150 (MQ=255) gccgccAGTGCAGCAGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTGATACCAGGCGCGGAAg > 1:2765168/1‑150 (MQ=255) gccgccAGTGCAGCAGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTGATACCAGGCGCGGAAg < 1:1289559/150‑1 (MQ=255) cgccAGTGCCGCAGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTGATACCAGGCGCGGAAGCg > 1:1013988/1‑150 (MQ=255) cgccAGTGCAGCAGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTGATACCAGGCGCGGAAGCg > 1:1386028/1‑150 (MQ=255) gccAGTGCAGCAGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTGATACCAGGCGCGGAAGCGa > 2:4741645/1‑150 (MQ=255) gccAGTGCAGCAGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTGATACCAGGCGCGGAAGCGa < 2:2363891/150‑1 (MQ=255) cAGTGCAGCAGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTGATACCAGGCGCGGAAGCGAcc < 2:1283666/150‑1 (MQ=255) cAGTGCAGCAGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTGATACCAGGCGCGGAAGCGAcc > 1:2959475/1‑150 (MQ=255) aGTGCAGCAGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTGATACCAGGCGCGGAAGCGACCg > 1:1881595/1‑150 (MQ=255) gTGCAGCAGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTGATACCAGGCGCGGAAGCGACCGa > 1:497124/1‑150 (MQ=255) cagcagCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTGATACCAGGCGCGGAAGCGACCGAGCa > 2:1522778/1‑150 (MQ=255) gcagcTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACAGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTGATACCAGGCGCGGAAGCGACCGAGCATa > 2:4593506/1‑150 (MQ=255) cagcTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTGATACCAGGCGCGGAAGCGACCGAGCATaa > 1:289077/1‑150 (MQ=255) agcTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTGATACCAGGCGCGGAAGCGACCGAGCATaaa > 1:2145104/1‑150 (MQ=255) cAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTGATACCAGGCGCGGAAGCGACCGAGCATAAAGTCGATAAc < 1:4143678/150‑1 (MQ=255) gggTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTGATACCAGGCGCGGAAGCGACCGAGCATAAAGTCGATAAcat > 1:2530288/1‑150 (MQ=255) ggTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTGATACCAGGCGCGGAAGCGACCGAGCATAAAGTCGATAAcatc < 2:1130080/150‑1 (MQ=255) gTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTGATACCAGGCGCGGAAGCGACCGAGCATAAAGTCGATAAcatca < 1:4891684/150‑1 (MQ=255) aCGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTGATACCAGGCGCGGAAGCGACCGAGCATAAAGTCGATAACatcatc > 2:4778555/1‑150 (MQ=255) cGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTGATACCAGGCGCGGAAGCGACCGAGCATAAAGTCGATAACAtcatca > 1:2039575/1‑150 (MQ=255) aaTGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTGATACCAGGCGCGGAAGCGACCGAGCATAAAGTCGATAACATCATCAACTa < 1:1428687/150‑1 (MQ=255) tGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTGATACCAGGCGCGGAAGCGACCGAGCATAAAGTCGATAACATCATCAACTACg < 2:3255359/150‑1 (MQ=255) tGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTGATACCAGGCGCGGAAGCGACCGAGCATAAAGTCGATAACATCATCAACTACg < 1:3013084/150‑1 (MQ=255) gCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTGATACCAGGCGCGGAAGCGACCGAGCATAAAGTCGATAACATCATCAACTACGt < 1:443281/150‑1 (MQ=255) aTACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTGATACCAGGCGCGGAAGCGACCGAGCATAAAGTCGATAACATCATCAACTACGTTgg < 1:4391266/150‑1 (MQ=255) cGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTGATACCAGGCGCGGAAGCGACCGAGCATAAAGTCGATAACATCATCAACTACGTTGGCAtt > 2:1731456/1‑150 (MQ=255) gCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTGATACCAGGCGCGGAAGCGACCGAGCATAAAGTCGATAACATCATCAACTACGTTGGCATTa < 1:3389990/150‑1 (MQ=255) cTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTGATACCAGGCGCGGAAGCGACCGAGCATAAAGTCGATAACATCATCAACTACGTTGGCATTAg > 2:703585/1‑150 (MQ=255) cTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTGATACCAGGCGCGGAAGCGACCGAGCATAAAGTCGATAACATCATCAACTACGTTGGCATTAg > 1:3670661/1‑150 (MQ=255) ttCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTGATACCAGGCGCGGAAGCGACCGAGCATAAAGTCGATAACATCATCAACTACGTTGGCATTAGTc < 1:5115631/150‑1 (MQ=255) tCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTGATACCAGGCGCGGAAGCGACCGAGCATAAAGTCGATAACATCATCAACTACGTTGGCATTAGTCa < 1:1585200/150‑1 (MQ=255) cATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTGATACCAGGCGCGGAAGCGACCGAGCATAAAGTCGATAACATCATCAACTACGTTGGCATTAGTCAg > 1:883929/1‑150 (MQ=255) cATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTGATACCAGGCGCGGAAGCGACCGAGCATAAAGTCGATAACATCATCAACTACGTTGGCATTAGTCAg < 1:1809674/150‑1 (MQ=255) tACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTGATACCAGGCGCGGAAGCGACCGAGCATAAAGTCGATAACATCATCAACTACGTTGGCATTAGTCAGCt < 1:3450389/150‑1 (MQ=255) cGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTGATACCAGGCGCGGAAGCGACCGAGCATAAAGTCGATAACATCATCAACTACGTTGGCATTAGTCAGCTTa < 2:4514718/150‑1 (MQ=255) gggCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTGATACCAGGCGCGGAAGCGACCGAGCATAAAGTCGATAACATCATCAACTACGTTGGCATTAGTCAGCTTAt > 2:3702187/1‑150 (MQ=255) cATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTGATACCAGGCGCGGAAGCGACCGAGCATAAAGTCGATAACATCATCAACTACGTTGGCATTAGTCAGCTTATCGc < 1:4362885/150‑1 (MQ=255) cATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTGATACCAGGCGCGGAAGCGACCGAGCATAAAGTCGATAACATCATCAACTACGTTGGCAGTAGTCAGCTTATCGc > 2:1372364/1‑150 (MQ=255) gAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTGATACCAGGCGCGGAAGCGACCGAACATAAAGTCGATAACATCATCAACTACGTTGGCATTAGTCAGCTTATCGCCATa > 1:477726/1‑150 (MQ=255) aaaTCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTGATACCAGGCGCGGAAGCGACCGAGCATAAAGTCGATAACATCATCAACTACGTTGGCATTAGTCAGCTTATCGCCATAc < 1:201189/150‑1 (MQ=255) aaaTCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTGATACCAGGCGCGGAAGCGACCGAGCATAAAGTCGATAACATCATCAACTACGTTGGCATTAGTCAGCTTATCGCCATAc < 2:2907263/150‑1 (MQ=255) aaaTCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTGATACCAGGCGCGGAAGCGACCGAGCATAAAGTCGATAACATCATCAACTACGTTGGCATTAGTCAGCTTATCGCCATAc > 1:4043035/1‑150 (MQ=255) aTCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTGATACCAGGCGCGGAAGCGACCGAGCATAAAGTCGATAACATCATCAACTACGTTGGCATTAGTCAGCTTATCGCCATACAg > 1:3572537/1‑150 (MQ=255) aGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTGATACCAGGCGCGGAAGCGACCGAGCATAAGGTCGATAACATCATCAACTACGTTGGCATTAGTCAGCTTATCGCCATACAGACg > 1:542715/1‑150 (MQ=255) ccGGACGAGTCGGACGACGCGCCAGTACCGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTGATACCAGGCGCGGAAGCGACCGAGCATAAAGTCGATAACATCATCAACTACGTTGGCATTAGTCAGCTTATCGCCATACAGACGCa < 1:4824085/150‑1 (MQ=255) ccGGACGAGTCGGACGACGCGCCAGTACCGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTGATACCAGGCGCGGAAGCGACCGAGCATAAAGTCGATAACATCATCAACTACGTTGGCATTAGTCAGCTTATCGCCATACAGACGCa < 2:3140929/150‑1 (MQ=255) cGGACGAGTCGGACGACGCGCCAGTACCGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTGATACCAGGCGCGGAAGCGACCGAGCATAAAGTCGATAACATCATCAACTACGTTGGCATTAGTCAGCTTATCGCCATACAGACGCAc > 2:3883048/1‑150 (MQ=255) ggACGAGTCGGACGACGCGCCAGTACCGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTGATACCAGGCGCGGAAGCGACCGAGCATAAAGTCGATAACATCATCAACTACGTTGGCATTAGTCAGCTTATCGCCATACAGACGCAcc < 1:795890/150‑1 (MQ=255) gACGAGTCGGACGACGCGCCAGTACCGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTGATACCAGGCGCGGAAGCGACCGAGCATAAAGTCGATAACATCATCAACTACGTTGGCATTAGTCAGCTTATCGCCATACAGACGCACCg < 2:4204837/150‑1 (MQ=255) aCGAGTCGGACGACGCGCCAGTACCGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTGATACCAGGCGCGGAAGCGACCGAGCATAAAGTCGATAACATCATCAACTACGTTGGCATTAGTCAGCTTATCGCCATACAGACGCACCGc > 1:4253101/1‑150 (MQ=255) cGAGTCGGACGACGCGCCAGTACCGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTGATACCAGGCGCGGAAGCGACCGAGCATAAAGTCGATAACATCATCAACTACGTTGGCATTAGTCAGCTTATCGCCATACAGACGCACCGct < 1:961226/150‑1 (MQ=255) gAGTCGGACGACGCGCCAGTACCGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTGATACCAGGCGCGGAAGCGACCGAGCATAAAGTCGATAACATCATCAACTACGTTGGCATTAGTCAGCTTATCGCCATACAGACGCACCGctt > 2:4647486/1‑150 (MQ=255) cGGACGACGCGCCAGTACCGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTGATACCAGGCGCGGAAGCGACCGAGCATAAAGTCGATAACATCATCAACTACGTTGGCATTAGTCAGCTTATCGCCATACAGACGCACCGCttcttc > 2:405122/1‑150 (MQ=255) cGGACGACGCGCCAGTACCGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTGATACCAGGCGCGGAAGCGACCGAGCATAAAGTCGATAACATCATCAACTACGTTGGCATTAGTCAGCTTATCGCCATACAGACGCACCGCttcttc < 1:3346700/150‑1 (MQ=255) cGGACGACGCGCCAGTACCGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTGATACCAGGCGCGGAAGCGACCGAGCATAAAGTCGATAACATCATCAACTACGTTGGCATTAGTCAGCTTATCGCCATACAGACGCACCGCttcttc < 2:497124/150‑1 (MQ=255) ggACGACGCGCCAGTACCGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTGATACCAGGCGCGGAAGCGACCGAGCATAAAGTCGATAACATCATCAACTACGTTGGCATTAGTCAGCTTATCGCCATACAGACGCACCGCTTCTTCg > 2:3039515/1‑150 (MQ=255) acgacgCGCCAGTACCGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTGATACCAGGCGCGGAAGCGACCGAGCATAAAGTCGATAACATCATCAACTACGTTGGCATTAGTCAGCTTATCGCCATACAGACGCACCGCTTCTTCGGt < 1:65865/150‑1 (MQ=255) acgacgCGCCAGTACCGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTGATACCAGGCGCGGAAGCGACCGAGCATAAAGTCGATAACATCATCAACTACGTTGGCATTAGTCAGCTTATCGCCATACAGACGCACCGCTTCTTCGGt < 2:5149582/150‑1 (MQ=255) cgacgCGCCAGTACCGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTGATACCAGGCGCGGAAGCGACCGAGCATAAAGTCGATAACATCATCAACTACGTTGGCATTAGTCAGCTTATCGCCATACAGACGCACCGCTTCTTCGGTc > 1:3866833/1‑150 (MQ=255) gcgcCAGTACCGCCTGGAGGGTGTCAACGGTATAACCTTCGTCCTGATACCAGGCGCGGAAGCGACCGAGCATAAAGTCGATAACATCATCAACTACGTTGGCATTAGTCAGCTTATCGCCATACAGACGCACCGCTTCTTCGGTCAGCg < 2:4915831/150‑1 (MQ=255) cAGTACAGCCTGGTTGGTGTCAACGGTATAACCTTCGTCCTGATACCAGGCGCGGAAGCGACCGAGCATAAAGTCGATAACATCATCAACTACGTTGGCATTAGTCAGCTTATCGCCATACAGACGCACCGCTTCTTCGGTCAGCGTTTg < 1:3687350/150‑1 (MQ=255) aGTACCGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTGATACCAGGCGCGGAAGCGACCGAGCATAAAGTCGATAACATCATCAACTACGTTGGCATTAGTCAGCTTATCGCCATACAGACGCACCGCTTCTTCGGTCAGCGTTTGc > 1:4181367/1‑150 (MQ=255) gTACCGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTGATACCAGGCGCGGAAGCGACCGAGCATAAAGTCGATAACATCATCAACTACGTTGGCATTAGTCAGCTTATCGCCATACAGACGCACCGCTTCTTCGGTCAGCGTTTGCa > 2:2735125/1‑150 (MQ=255) cGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTGATACCAGGCGCGGAAGCGACCGAGCATAAAGTCGATAACATCATCAACTACGTTGGCATTAGTCAGCTTATCGCCATACAGACGCACCGCTTCTTCGGTCAGCGTTTGCAGATc < 1:1712270/150‑1 (MQ=255) | CTCAGCACTTCGTCAGATTTCGCCAGAATGTTAGATACACGTTTGTTCGCCGCCGCCAGTGCAGCAGCTGCATCCAGGGTACGGAAATGCGATACCGCTTTCATACGGGCATCGAAATCAGCCGGACGAGTCGGACGACGCGCCAGTACCGCCTGGATGGTGTCAACGGTATAACCTTCGTCCTGATACCAGGCGCGGAAGCGACCGAGCATAAAGTCGATAACATCATCAACTACGTTGGCATTAGTCAGCTTATCGCCATACAGACGCACCGCTTCTTCGGTCAGCGTTTGCAGATC > CP009273/3715965‑3716263 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |