BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	776825 =	113 (0.500)	19 (0.090) +G	4/274	NT	12.4%	noncoding (1/76 nt)	lysZ	tRNA‑Lys
*	?	CP009273	= 2514487	157 (0.700)	19 (0.090) +G	4/274	NT	12.4%	noncoding (215/1345 nt)	IS186	repeat region

Only 100 of 157 total aligned reads displayed.

GTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGA  >  CP009273/776679‑776969

 ttttAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCACTCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGt                                                                                                                                               >  2:3996459/1‑149 (MQ=255)

 ttttAAAACAAACCTCTGTTGATATGCGTGATGTTTACCGTGGCCCCCGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGt                                                                                                                                               <  1:757357/149‑1 (MQ=21)

          cAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTc                                                                                                                                      >  1:2862771/1‑149 (MQ=255)

          cAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTc                                                                                                                                      >  1:2290316/1‑149 (MQ=255)

          cAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTc                                                                                                                                      >  1:2290312/1‑149 (MQ=255)

            aaCTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTAAAAGATAGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGATCAg                                                                                                                                    >  2:1506755/1‑149 (MQ=255)

              cTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGtt                                                                                                                                  <  2:3769805/149‑1 (MQ=255)

              cTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGtt                                                                                                                                  <  2:3769796/149‑1 (MQ=255)

              cTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCATGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGtt                                                                                                                                  >  2:526458/1‑149 (MQ=255)

                  gATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTa                                                                                                                              >  1:3206174/1‑149 (MQ=255)

                    tGTTTAGCGGGAAGGATAACGTTGCGACAGCAACGCCCCGTAGGTCGAGCGTAGCGAGTCATCCTGCACGACCCACCAATCAAAAAGAGTGGCCCCGAGTAAAAATCGTTCAGGTAACCCCCGTATGGGTCGTTAGCTCAGTTGGTaga                                                                                                                            <  2:4068425/149‑1 (MQ=25)

                      ttAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCGTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGc                                                                                                                          >  2:3359900/1‑149 (MQ=255)

                        aaGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAg                                                                                                                        <  1:1792435/149‑1 (MQ=255)

                        aaGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAg                                                                                                                        <  1:4319446/149‑1 (MQ=255)

                         aGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGt                                                                                                                       <  2:3683624/149‑1 (MQ=255)

                         aGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGt                                                                                                                       <  2:2728666/149‑1 (MQ=255)

                           cGTGTAGGATAACGTTGCGACAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTg                                                                                                                     <  1:1941613/149‑1 (MQ=255)

                            gTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAATGATTGGCCCCGAGTAAAAATCCTACAGGTAACTCGCGGATTGGTCGTTGGCTCTGTGGGTAGAGCAGTTGa                                                                                                                    >  2:1225163/1‑149 (MQ=21)

                            gTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGa                                                                                                                    >  1:3590836/1‑149 (MQ=255)

                             tGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGAc                                                                                                                   >  1:257113/1‑149 (MQ=255)

                               aaGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTTGACCCGAGTAAAAATCGTGCAGGTAACACCCGGATGGGTCGTTAGATCAGTTGGTAGAGCAGTTGACtt                                                                                                                 >  2:4369105/1‑149 (MQ=25)

                               aaGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTGAGTTGGTAGTGCAGTTGACtt                                                                                                                 >  2:3998603/1‑149 (MQ=255)

                               aaGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACtt                                                                                                                 <  1:1078824/149‑1 (MQ=255)

                                aGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACttt                                                                                                                >  1:3071219/1‑149 (MQ=255)

                                   aTAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGGTGGTAGAGCAGTTGACTTTTaa                                                                                                             >  1:3436913/1‑149 (MQ=255)

                                    tAACGTTTCGCCAGCTACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAACGATGGGCCCCGAGTTACTATCTTTCAGGTACCACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAAt                                                                                                            <  2:2063610/149‑1 (MQ=37)

                                    tAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAAt                                                                                                            <  2:2149639/149‑1 (MQ=255)

                                    tAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAAt                                                                                                            <  2:2063611/149‑1 (MQ=255)

                                    tAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGGATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAAt                                                                                                            >  1:62590/1‑149 (MQ=255)

                                     accGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCACTCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATc                                                                                                           <  2:4193650/147‑1 (MQ=255)

                                     aaCGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATc                                                                                                           <  1:3547648/149‑1 (MQ=255)

                                      aCGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAAGCa                                                                                                          >  2:641459/1‑149 (MQ=255)

                                         tggcgcCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAAtt                                                                                                       <  2:299533/147‑1 (MQ=255)

                                                aGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCa                                                                                                <  2:3610709/149‑1 (MQ=255)

                                                 gCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGGTAGCTCAGGTGGTAGAGCAGTTGACTTTTAATCCATTGGGCGCAg                                                                                               >  2:3838422/1‑149 (MQ=255)

                                                   aaCGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCATAAAGATTGGCCCCGAGTAAAAATCTTTCAGGGAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGt                                                                                             <  2:3828870/149‑1 (MQ=255)

                                                    aCGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGtt                                                                                            >  1:1509428/1‑149 (MQ=255)

                                                         ccGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAAT                                                                                       >  2:3840108‑M1/1‑149 (MQ=255)

                                                             aGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAATGATTGTCCCCGAGTAAAAAACGTACAGGTAACACCCGTATGGGTCGTTAGCTGAGTTGGTAGATCAGTTGTCTTTTAATCAATTTCTCGCAGGGTCTAATCCTG                                                                                   >  1:3818681‑M1/1‑149 (MQ=255)

                                                             aGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACATGTAATCAATTGGTCGCAGGTTCGAATCCTG                                                                                   >  1:3817477‑M1/1‑149 (MQ=255)

                                                              gggCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGt                                                                                                                                            <  1:4163618/91‑1 (MQ=255)

                                                              gggCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGC                                                                                  >  2:3870095‑M1/1‑149 (MQ=255)

                                                               ggCGAGCGTAGCGAGTCATCCTGCACGACCCACCACTCTTAAAGATTGGCCCCGAGTAAAGATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCA                                                                                 <  2:1677801‑M1/149‑1 (MQ=255)

                                                               ggCGAGCGCAGCGAGTCATCCTGCACGACACACCCATCATAACGATGGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGGATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCA                                                                                 <  2:2745565‑M1/149‑1 (MQ=255)

                                                               ggCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAACGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTAAGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCA                                                                                 <  2:1677804‑M1/149‑1 (MQ=255)

                                                                    ggtgattagctcagctgggagagcacctcccttacaaggagggggtcggcggttcgatcccgtcatcacccaccactcGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGAcc                                                                            <  1:1297205‑M1/71‑1 (MQ=255)

                                                                     cgaagcgaGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCC                                                                           <  1:4242655‑M1/149‑1 (MQ=255)

                                                                      tgattagctcagctgggagagcacctcccttacaaggagggggtcggcggttcgatcccgtcatcacccaccactcGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACcca                                                                          >  1:4422781‑M1/77‑149 (MQ=255)

                                                                           gaGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAAT                                                                     <  2:800164‑M1/149‑1 (MQ=255)

                                                                           agctcagctgggagagcacctcccttacaaggagggggtcggcggttcgatcccgtcatcacccaccactcGGGTCGTTAGCTCAGTTGGTa                                                                                                                              >  1:1678267‑M1/72‑92 (MQ=255)

                                                                            gctcagctgggagagcacctcccttacaaggagggggtcggcggttcgatcccgtcatcacccaccactcGGGTCGTTAGCTCAGTTGGGAGAGCAGTTGACTTTTACTCCAGTGGTCGCAGGGTCGAATCCTGCTcgacccacccgtg                                                                    <  2:1160049‑M1/79‑5 (MQ=255)

                                                                             gTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACAACCCACCAAatt                                                                   >  1:1896068‑M1/1‑146 (MQ=255)

                                                                              tCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACGTTTAATCAATGGGTCGCAGGTTCGAATCCTGCACGACCCACCAAgtta                                                                  >  1:1127477‑M1/1‑145 (MQ=255)

                                                                                aTCCTGCACGACACACCAATCTTAAAGATTGGCACCGAGTAAATATCTTTCATGTAACAACCTTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTaaa                                                                <  2:455402/149‑1 (MQ=21)

                                                                                 tCCTTCACGACACACCACTCAGAAAGAGTGGCCCCGAGTAAAAATCTTTCAGGCAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAg                                                               <  2:2364597/149‑1 (MQ=21)

                                                                                  ccTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGACGCAGGTTCGAATCCTGCACGACCCACCAATTTaaatt                                                              >  1:1720412/1‑147 (MQ=255)

                                                                                   cTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAggt                                                             <  2:3385838/149‑1 (MQ=255)

                                                                                     gCACGACCCACCAATCTTATAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATTGTTCGTTAGCTCAGTTGGTAGATCAGTTGACTTTTAATAAAGTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAggtgg                                                           <  2:4268237/149‑1 (MQ=25)

                                                                                         gACCCACCAATCTTAAAGATTGGCCCCGATTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTAc                                                       <  1:1408331/149‑1 (MQ=255)

                                                                                           cccACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTg                                                     >  2:2337220/1‑149 (MQ=255)

                                                                                            acctcccttacaaggagggggtcggcggttcgatcccgtcatcacccaccactcGGGTCGTTAGCTCAGTTGGTa                                                                                                                              <  2:764994‑M1/21‑1 (MQ=255)

                                                                                            acctcccttacaaggagggggtcggcggttcgatcccgtcatcacccaccactcGGGTCGTTAGCTCAGTTGGTa                                                                                                                              >  1:764994‑M1/55‑75 (MQ=255)

                                                                                                caATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGAAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTaga                                                <  2:2776526/149‑1 (MQ=255)

                                                                                                 caTCATAAAGAGTGGCCCCGAGTAACTATCTTTCCTGTAACACCCGCATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTagag                                               <  2:783556/148‑1 (MQ=21)

                                                                                                 aaTCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTagag                                               <  2:3093407/149‑1 (MQ=255)

                                                                                                    cTTACAGATTGGCCCCGAGTAAACCTCTTTCCGGTCACCCCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCGGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAAc                                            <  1:2877933/149‑1 (MQ=21)

                                                                                                      tAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCTGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAATGTGGTAACTGGTCGAGAACGt                                          >  2:3069774/1‑149 (MQ=255)

                                                                                                      tAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGt                                          >  1:483902/1‑149 (MQ=255)

                                                                                                      tAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGATGCTGACTGGTAGAGAActt                                          >  2:862664/1‑147 (MQ=255)

                                                                                                       aaaGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTATCTAAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTAGCAGTTTCGAATCCAGCACGACACACCAATTTAAAGGTGGTTACATGTAGAGAAAGTg                                         >  1:3078900/1‑149 (MQ=25)

                                                                                                       aaaGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTg                                         <  2:3745090/149‑1 (MQ=255)

                                                                                                       aaaGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTg                                         >  1:3078914/1‑149 (MQ=255)

                                                                                                         ggagggggtcggcggttcgatcccgtcatcacccaccactcGGGTCGTTAGCTCCGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCACTTTAAACGTGCTTCAAGGAAGAgaacgggga                                       <  2:2208490‑M1/108‑5 (MQ=255)

                                                                                                         ggagggggtcggcggttcgatcccgtcatcacccaccactcGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGaa                                       >  2:1297205‑M1/42‑149 (MQ=255)

                                                                                                         cgagtGGCCCGGAGGAAAAATCTGTCAGGCAACACCCCTACGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGaa                                       <  1:2208490/145‑1 (MQ=18)

                                                                                                         cgATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGaa                                       <  2:1298927/148‑1 (MQ=255)

                                                                                                           aTTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTTACTTTTAATCAATTGGTCGCAGGTTCGAATACTGCACGACCCACCAAATTAAAGGTGGGTACTGGTAGAGAACGTGTAgg                                     >  1:789662/1‑149 (MQ=25)

                                                                                                           aTTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCAGCACGACCCACCAATTTAAAGGTGGTTCCTGGTAGAGAACGTGAAgg                                     >  1:7907/1‑149 (MQ=255)

                                                                                                            ttGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGa                                    <  2:4184187/149‑1 (MQ=255)

                                                                                                            gggggtcggcggttcgatcccgtcatcacccaccactcGGGTCGTTAGCTCAGGTGGTAGAGCAGTTGACtt                                                                                                                 <  1:4100162‑M1/34‑1 (MQ=255)

                                                                                                              ggCCCCGAGTAAACATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATa                                  <  2:4153806/149‑1 (MQ=255)

                                                                                                              ggCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCCATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATa                                  >  1:3460659/1‑149 (MQ=255)

                                                                                                              ggCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATa                                  >  1:1331653/1‑149 (MQ=255)

                                                                                                                ccccGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAAc                                <  2:3747486/149‑1 (MQ=255)

                                                                                                                    gAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATgtaaaaaagcgccctaaaggcgcttttttgctatctgcgat                            >  2:1780830‑M1/1‑108 (MQ=255)

                                                                                                                     aGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAGGTGGTTACTGGTAGAGAACGTGAAGGAGAACGTTGc                           >  1:996789/1‑149 (MQ=255)

                                                                                                                       tAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAAGTTAATGGTGGTTACTGGTAGAGGACGTGAAGGAGAACGTTGCgg                         >  2:3114890/1‑148 (MQ=255)

                                                                                                                         aaaaTCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTTACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGAAGCACAATGTCACAGGTGTTTACTGGAAGATAACGAGACGGATAACGTTGCGGTa                       >  1:360657/1‑149 (MQ=18)

                                                                                                                         aaaaTCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTa                       >  1:3220788/1‑149 (MQ=255)

                                                                                                                         aaaaTCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTa                       >  2:4359736/1‑149 (MQ=255)

                                                                                                                         aaaaTCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATAAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAATGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTa                       >  1:1148182/1‑149 (MQ=255)

                                                                                                                             tctgtgtggTAACACCATTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCaa                   <  1:2514012/142‑1 (MQ=255)

                                                                                                                             tCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCaa                   >  2:4122219/1‑149 (MQ=255)

                                                                                                                              cccgacctcacccccccctaGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAAc                  >  2:1829710‑M1/21‑149 (MQ=255)

                                                                                                                                   agttAACACCCGTTTGGGTCGTTTTCTCAGTTGGTATAGCTGTTTAATTTTAATAATTTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGATGGATAACGTTGCGTTAGCAACGGccc             <  1:1821484/146‑1 (MQ=21)

                                                                                                                                   aGGTAACACCCGTAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGccc             <  2:3786951/149‑1 (MQ=255)

                                                                                                                                    ggTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCg            >  1:1609448/1‑149 (MQ=255)

                                                                                                                                       aaCACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGGTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAg         >  2:3577642/1‑149 (MQ=255)

                                                                                                                                            ccGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTAACTGGAAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCga    >  1:1699841/1‑149 (MQ=255)

                                                                                                                                              gTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCgaga  >  2:2337956/1‑149 (MQ=255)

GTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGA  >  CP009273/776679‑776969

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.