| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC JC | CP009273 | 1,376,043 | IS5 (–) +4 bp | 100% | pseudogene (10‑13/126 nt) | ycjV → | pseudogene; putative ATP‑binding component of a transport system |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1376043 = | 6 (0.030) | 178 (0.790) | 107/276 | NT | 96.6% | pseudogene (10/126 nt) | ycjV | pseudogene; putative ATP‑binding component of a transport system |
| ? | CP009273 | = 2283592 | NA (NA) | noncoding (1/1195 nt) | IS5 | repeat region | |||||
| * | ? | CP009273 | = 1376046 | 6 (0.030) | 186 (0.830) | 119/276 | NT | 96.8% | pseudogene (13/126 nt) | ycjV | pseudogene; putative ATP‑binding component of a transport system |
| ? | CP009273 | 2095230 = | NA (NA) | noncoding (1195/1195 nt) | IS5 | repeat region | |||||
Only 100 of 463 total aligned reads displayed.
AAAGTTTGCATAAGCCCATCGTGATGGGAATACGACCGGAAGATATTCATCCGGACGCGCAAGAGGAAAATAACATTTCCGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCAATTCGCTAAATACAGGGGGAAGGCATTCCCCCAGGATAATA > CP009273/1375895‑1376191 | cgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcct > 1:326016‑M1/149‑149 (MQ=255)aaaGTTTGCATAAGCCCATCGTGATGGGAATACGACCGGAAGATATTCATCCGGACGCGCAAGAGGAAAATAACATTTCCGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGt > 1:1997984/1‑149 (MQ=255) gggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcctt > 1:1236429‑M1/148‑149 (MQ=255) gggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcctt > 1:1298148‑M1/148‑149 (MQ=255) gggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcctt > 1:498586‑M1/148‑149 (MQ=255) aaGTTTGCATAAGCCCATCGTGATGGGAATACGACCGGAAGATATTCATCCGGACGCGCAAGAGGAAAATAACATTTCCGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGtt < 2:2511939/149‑1 (MQ=255) aaGTTTGCATAAGCCCATCGTGATGGGAATACGACCGGAAGATATTCATCCGGACGCGCAAGAGGAAAATAACATTTCCGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGtt < 2:3988478/149‑1 (MQ=255) ggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTa < 2:1043493‑M1/3‑1 (MQ=255) ggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTa < 2:2956639‑M1/3‑1 (MQ=255) ggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTa < 2:3503557‑M1/3‑1 (MQ=255) gacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAg < 2:2770563‑M1/4‑1 (MQ=255) gacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAg < 2:2933432‑M1/4‑1 (MQ=255) gacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAg > 1:2979640‑M1/146‑149 (MQ=255) acaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGt < 1:2221775‑M1/5‑1 (MQ=255) gCATAAGCCCATCGTGATGGGAATACGACCGGAAGATATTCATCCGGACGCGCAAGAGGAAAATAACATTTCCGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGggaa > 2:2591555‑M1/1‑145 (MQ=255) agaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTGGt < 2:1419547‑M1/8‑1 (MQ=255) gaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTGGTc > 1:2548546‑M1/141‑149 (MQ=255) aaGCCCATCGTGATGGGAATACGACCGGAAGATATTCATCCGGACGCGCAAGAGGAAAATAACATTTCCGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGggaaggtg > 1:1622984‑M1/1‑141 (MQ=255) aGCCCATCGTGATGGGAATACGACCGGAAGATATTCATCCGGACGCGCAAGAGGAAAATAACATTTCCGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGggaaggtgc > 1:1101209‑M1/1‑140 (MQ=255) tctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTGGTCCGTGc > 2:1249457‑M1/136‑149 (MQ=255) ttttcttgtctgacggcgctttctgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttatattgctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTGGTCCGTGCTGGt > 1:233805‑M1/132‑149 (MQ=255) ttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTGGTCCGTGCTGGTGc > 1:4191614‑M1/130‑149 (MQ=255) ggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTGGTCCGTGCTGGTGCGTTa < 1:2942604‑M1/24‑1 (MQ=255) tGGGAATACGACCGGAAGATATTCATCCGGACGCGCAAGAGGAAAATAACATTTCCGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTaa > 1:3492584/1‑149 (MQ=255) gtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTGGTCCGTGCTGGTGCGTTaa < 1:3702166‑M1/25‑1 (MQ=255) acggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTGGTCCGTGCTGGTGCGTTAAATGAt < 1:2068095‑M1/30‑1 (MQ=255) ggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTGGTCCGTGCTGGTGCGTTAAATGATTa > 1:3338437‑M1/118‑149 (MQ=255) gcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTGGTCCGTGCTGGTGCGTTAAATGATTAt < 1:2455693‑M1/33‑1 (MQ=255) gACCGGAAGATATTCATCCGGACGCGCAAGAGGAAAATAACATTTCCGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGggaaggtgcgaataagcggggaaattcttc < 1:3289634‑M1/149‑31 (MQ=255) aCCGGAAGATATTCATCCGGACGCGCAAGAGGAAAATAACATTTCCGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGggaaggtgcgaataagcggggaaattcttct > 2:578980‑M1/1‑118 (MQ=255) aGATATTCATCAGGACGCGCAAGAGGAAAATAACATTTCCGCAAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGggaaggtgcgaataagcggggaaagtctactcggctg > 2:73241‑M1/1‑112 (MQ=255) ctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGgag > 2:1495578‑M1/107‑149 (MQ=255) tgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGgaga < 1:2500531‑M1/44‑1 (MQ=255) tgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGgaga < 2:4395419‑M1/44‑1 (MQ=255) tatTCATCCGGACGCGCAAGAGGAAAATAACAGTTCCGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgact < 2:3573036‑M1/149‑41 (MQ=255) ttCATCCGGACGCGCAAGAGGAAAATAACATTTCCGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactca < 1:3562718‑M1/149‑43 (MQ=255) tcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAata > 1:276228‑M1/101‑149 (MQ=255) aTCCGGACGCGCAAGAGGAAAATAACATTTCCGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtc > 2:2406790‑M1/1‑104 (MQ=255) tCCGGACGCGCAAGAGGAAAATAACATTTCCGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtca > 2:1548021‑M1/1‑103 (MQ=255) gACGCGCAAGAGGAAAATAACATTTCCGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttc < 2:2890030‑M1/149‑51 (MQ=255) cggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTAt > 2:2149461‑M1/94‑149 (MQ=255) cggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTAt > 1:3184102‑M1/94‑149 (MQ=255) cggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTAt > 2:4331100‑M1/94‑149 (MQ=255) cgcAAGAGGAAAATAACATTTCCGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcattt < 2:3049796‑M1/149‑55 (MQ=255) gcAAGAGGAAAATAACATTTCCGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttc < 1:698504‑M1/149‑56 (MQ=255) aaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCAtt > 1:4031591‑M1/89‑149 (MQ=255) agagGAAAATAACATTTCCGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttc > 2:195176‑M1/1‑91 (MQ=255) ggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCAtttt > 1:1781837‑M1/87‑149 (MQ=255) agttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGata < 2:3859120‑M1/67‑1 (MQ=255) aaaaTAACATTTCCGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtt > 2:1128940‑M1/1‑86 (MQ=255) aTAACATTTCCGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttga < 2:1825921‑M1/149‑67 (MQ=255) gatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGAc < 1:1051923‑M1/71‑1 (MQ=255) gatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGAc > 1:2159561‑M1/79‑149 (MQ=255) aaCATTTCCGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGggaaggtgcgaataagcggggacattcttctcggctgactcagtcatttcatttcttcatgtttgagc > 1:810818‑M1/1‑81 (MQ=255) aaCATTTCCGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACg > 1:1003328/1‑149 (MQ=255) aCATTTCCGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagcc < 1:2612654‑M1/149‑70 (MQ=255) actcatgatgaaccctggtctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGaaa > 2:2861185‑M1/75‑149 (MQ=255) ttCCGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgatt > 2:3689662‑M1/1‑76 (MQ=255) ccGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgatttt < 1:935968‑M1/149‑76 (MQ=255) gCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgatttttt < 1:3979231‑M1/149‑78 (MQ=255) tgaaccctgttctatgtctccagatgacaaacattatctcatatcagggacttgttcgcacattccTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGAAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCAttt < 1:412002‑M1/83‑1 (MQ=255) tgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCAttt > 1:4377751‑M1/67‑149 (MQ=255) cctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTg > 1:3144419‑M1/62‑149 (MQ=255) tAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgta < 2:2021566‑M1/149‑86 (MQ=255) aGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaa > 1:2440307‑M1/1‑63 (MQ=255) gCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaa > 2:1794786‑M1/1‑62 (MQ=255) tctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCa < 2:4294996‑M1/93‑1 (MQ=255) aaTTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaa > 1:3064104‑M1/1‑53 (MQ=255) aaTTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaa < 1:2716972‑M1/149‑97 (MQ=255) ttAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatc < 1:1863517‑M1/149‑99 (MQ=255) tAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatca < 1:3769665‑M1/149‑100 (MQ=255) cagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGaaa > 2:881818‑M1/47‑149 (MQ=255) aaCCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcag > 2:4229044‑M1/1‑49 (MQ=255) aaCCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcag < 2:3088111‑M1/149‑101 (MQ=255) gatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATa > 2:3427624‑M1/45‑149 (MQ=255) tgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGc > 1:2810340‑M1/43‑149 (MQ=255) gTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCaa < 2:2222665/149‑1 (MQ=255) gCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctattt > 2:1742394‑M1/1‑42 (MQ=255) ttATGCTCTACACCACGGTTGGGGGCACGAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgt < 1:1391971‑M1/149‑115 (MQ=255) aTGCTCTACACCACGGTTGGGGGCACGAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgttt > 2:2065766‑M1/1‑33 (MQ=255) tcatatcagggacttgttcgcaccttccTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCAATTCGCTAAATAc > 2:1339444‑M1/29‑149 (MQ=255) tcagggacttgttcgcaccttccTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCAATTCGCTAAATACAgggg < 2:3544992‑M1/126‑1 (MQ=255) tACACCACGGTTGGGGGCACGAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgta < 2:3161778‑M1/112‑86 (MQ=255) acacCACGGTTGGGGGCACGAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgcc < 1:1128940‑M1/149‑124 (MQ=255) caccacGGTTGGGGGCACGAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgcca < 1:1673214‑M1/149‑125 (MQ=255) agggacttgttcgcaccttccTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCAATTCGCTAAATACAGGGGGa > 2:3803639‑M1/22‑149 (MQ=255) agggacttgttcgcaccttccTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCAATTCGCTAAATACAGGGGGa > 2:1582772‑M1/22‑149 (MQ=255) acttgttcgcaccttccTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCAATTCGCTAAATACAGGGGGAAGGc > 2:3226303‑M1/18‑149 (MQ=255) acttgttcgcaccttccTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCAATTCGCTAAATACAGGGGGAAGGc > 1:4223101‑M1/18‑149 (MQ=255) gTTGGGGGCACGAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaagg < 2:3339709‑M1/149‑132 (MQ=255) gTTGGGGGCACGAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaagg < 2:568441‑M1/149‑132 (MQ=255) ttcgcaccttccTTAGTGGTCCGTACTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCAATTCGCTAAATACAGGGGGAAGGCATTcc > 2:2660560‑M1/13‑149 (MQ=255) gggggCACGAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgt < 1:578979‑M1/149‑135 (MQ=255) gggCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCAATTCGCTAAATACAGGGGGAAGGCATTccccc < 2:971885/149‑1 (MQ=255) cttccTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCAATTCGCTAAATACAGGGGGAAGGCATTCCCCCAGGa < 2:3138896‑M1/144‑1 (MQ=255) ccTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCAATTCGCTAAATACAGGGGGAAGGCATTCCCCCAGGataa > 1:3102353‑M1/3‑149 (MQ=255) gTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagt < 1:3877056‑M1/149‑145 (MQ=255) cTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCAATTCGCTAAATACAGGGGGAAGGCATTCCCCCAGGataat > 2:846638‑M1/2‑149 (MQ=255) ttAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtt < 1:3806780‑M1/149‑146 (MQ=255) ttAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtt > 2:2803424‑M1/1‑4 (MQ=255) | AAAGTTTGCATAAGCCCATCGTGATGGGAATACGACCGGAAGATATTCATCCGGACGCGCAAGAGGAAAATAACATTTCCGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCAATTCGCTAAATACAGGGGGAAGGCATTCCCCCAGGATAATA > CP009273/1375895‑1376191 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |