Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | CP009273 | 295,695 | T→G | 25.4% | E317D (GAA→GAC) | paoC ← | PaoABC aldehyde oxidoreductase, Moco‑containing subunit |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | CP009273 | 295,695 | 0 | T | G | 25.4% | 381.9 / 76.1 | 223 | E317D (GAA→GAC) | paoC | PaoABC aldehyde oxidoreductase, Moco‑containing subunit |
Reads supporting (aligned to +/- strand): ref base T (48/115); new base G (56/4); total (104/119) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 9.75e-19 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 229 total aligned reads displayed.
CGTCGATCGCGATTTCGAGCGCCATCAGACCGGGGGCTTCGCCGGGCGCACGCATGGCGTTCCCTTCCGGCAAATCAAGCGTGGCGAGCCGCAGGCCGGTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGC‑TTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGCGGGGGAGCATCA > CP009273/295547‑295843 | cgtcgATCGCGATTTCGAGCGCCATCAGACCGGGGGCTTCGCCGGGCGCACGCATGGCGTTCCCTTCCGGCAAATCAAGCGTGGCGAGCCGCAGGCCGGTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGtt < 1:1634394/149‑1 (MQ=255) gATCGCGATTTCGAGCGCCATCAGACCGGGGGCTTCGCCGGGCGCACGCATGGCGTTCCCTTCCGGCAAATCAAGCGTGGCGAGCCGCAGGCCGGTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTTTCCg > 2:3870706/1‑149 (MQ=255) aTCGCGATTTCGAGCGCCATCAGACCGGGGGCTTCGCCGGGCGCACGCATGGCGTTCCCTTCCGGCAAATCAAGCGTGGCGAGCCGCAGGCCGGTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTGTGCgg > 2:1113466/1‑149 (MQ=255) tCGCGATTTCGAGCGCCATCAGACCGGGGGCTTCGCCGGGCGCACGCATGGCGTTCCCTTCCGGCAAATCAAGCGTGGCGAGCCGCAGGCCGGTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTTTCCGGc > 2:1085990/1‑149 (MQ=255) gATTTCGAGCGCCATCAGACCGGGGGCTTCGCCGGGCGCACGCATGGCGTTCCCTTCCGGCAAATCAAGCGTGGCGAGCCGCAGGCCGGTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTTTCCGGCGTgc < 2:2401903/149‑1 (MQ=255) gATTTCGAGCGCCATCAGACCGGGGGCTTCGCCGGGCGCACGCATGGCGTTCCCTTCCGGCAAATCAAGCGTGGCGAGCCGCAGGCCGGTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTTTCCGGCGTgc < 1:3180357/149‑1 (MQ=255) gATTTCGAGCGCCATCAGACCGGGGGCTTCGCCGGGCGCACGCATGGCGTTCCCTTCCGGCAAATCAAGCGTGGCGAGCCGCAGGCCGGTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTGTTCggggggc > 1:34209/1‑144 (MQ=255) aTTTCGAGCGCCATCAGACCGGGGGCTTCGCCGGGCGCACGCATGGCGTTCCCTTCCGGCAAATCAAGCGTGGCGAGCCGCAGGCCGGTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTTTCCGGCGTgcc < 2:4196048/149‑1 (MQ=255) ttCGAGCGCCATCAGACCGGGGGCTTCGCCGGGCGCACGCATGGCGTTCCCTTCCGGCAAATCAAGCGTGGCGAGCCGCAGGCCGGTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTTTCCGGCGTgccgc < 1:3997180/149‑1 (MQ=255) ttCGAGCGCCATCAGACCGGGGGCTTCGCCGGGCGCACGCATGGCGTTCCCTTCCGGCAAATCAAGCGTGGCGAGCCGCAGGCCGGTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTTTCCGGCGTgccgc < 1:1777706/149‑1 (MQ=255) gAGCGCCATCAGACCGGGGGCTTCGCCGGGCGCACGCATGGCGTTCCCTTCCGGCAAATCAAGCGTGGCGAGCCGCAGGCCGGTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTTTCCGGCGTGCCGCCgg < 1:4146731/149‑1 (MQ=255) gAGCGCCATCAGACCGGGGGCTTCGCCGGGCGCACGCATGGCGTTCCCTTCCGGCAAATCAAGCGTGGCGAGCCGCAGGCCGGTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTGTCCGGCGTGCCGCCgg > 2:3812203/1‑149 (MQ=255) aGCGCCATCAGACCGGGGGCTTCGCCGGGCGCACGCATGGCGTTCCCTTCCGGCAAATCAAGCGTGGCGAGCCGCAGGCCGGTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTTGACGGCGGGCCGCCggg > 1:900527/1‑149 (MQ=255) gcCATCAGACCGGGGGCTTCGCCGGGCGCACGCATGGCGTTCCCTTCCGGCAAATCAAGCGTGGCGAGCCGCAGGCCGGTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTGTACGGCGGGCCGCCggggcg > 1:1494508/1‑146 (MQ=255) aGACCGGGGGCTTCGCCGGGCGCACGCATGGCGTTCCCTTCCGGCAAATCAAGCGTGGCGAGCCGCAGGCCGGTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTcc < 2:3494396/149‑1 (MQ=255) cGGGGGCTTCGCCGGGCGCACGCATGGCGTTCCCTTCCGGCAAATCAAGCGTGGCGAGCCGCAGGCCGGTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGAc < 1:229466/149‑1 (MQ=255) gggggCTTCGCCGGGCGCACGCATGGCGTTCCCTTCCGGCAAATCAAGCGTGGCGAGCCGCAGGCCGGTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTTTACGGCGTGCCGCCGGGCAGGTTTCCAGAcc > 2:2459296/1‑149 (MQ=255) gggggCTTCGCCGGGCGCACGCATGGCGTTCCCTTCCGGCAAATCAAGCGTGGCGAGCCGCAGGCCGGTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTGTCCGGCGGGCCGCCGGGCCGGTTTCCCGAcc > 2:69046/1‑149 (MQ=255) ggggCTTCGCCGGGCGCACGCATGGCGTTCCCTTCCGGCAAATCAAGCGTGGCGAGCCGCAGGCCGGTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCa < 2:2879303/149‑1 (MQ=255) ggggCTTCGCCGGGCGCACGCATGGCGTTCCCTTCCGGCAAATCAAGCGTGGCGAGCCGCAGGCCGGTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTGTGCGGCGGGCCGCCCGGCCGGTGTCCAGACCa > 1:4362596/1‑149 (MQ=255) ggggCTTCGCCGGGCGCACGCATGGCGTTCCCTTCCGGCAAATCAAGCGTGGCGAGCCGCAGGCCGGTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTGTCCCGCGTGCCGCCGGGCAGGTTTCCAGAACa > 1:4362739/1‑149 (MQ=255) gggCTTCGCCGGGCGCACGCATGGCGTTCCCTTCCGGCAAATCAAGCGTGGCGAGCCGCAGGCCGGTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTGTGCGGCGGGCCGCCCGGCCGGGTTCCacaacac > 1:2614754/1‑143 (MQ=255) gggCTTCGCCGGGCGCACGCATGGCGTTCCCTTCCGGCAAATCAAGCGTGGCGAGCCGCAGGCCGGTATGACGATTCGCCCCGGCGTAGAGGAATTCGCTTTGCTGTACCGCCGTGTCCGGCGTGCCCCCCGGCCGGTTTCCCGAcccc > 1:4052901/1‑147 (MQ=255) cTTCGCCGGGCGCACGCATGGCGTTCCCTTCCGGCAAATCAAGCGTGGCGAGCCGCAGGCCGGTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGC‑tt < 2:4355873/149‑1 (MQ=255) tCGCCGGGCGCACGCATGGCGTTCCCTTCCGGCAAATCAAGCGTGGCGAGCCGCAGGCCGGTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTGTCCCGCGTGCCCCCGGGCCCGGTTCCCGACCACC‑ATTc > 2:3155975/1‑149 (MQ=255) ccGGGCGCACGCATGGCGTTCCCTTCCGGCAAATCAAGCGTGGCGAGCCGCAGGCCGGTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGC‑TTTCAtg < 1:92831/149‑1 (MQ=255) ccGGGCGCACGCATGGCGTTCCCTTCCGGCAAATCAAGCGTGGCGAGCCGCAGGCCGGTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGC‑TTTCAtg < 2:2983921/149‑1 (MQ=255) cGGGCGCACGCATGGCGTTCCCTTCCGGCAAATCAAGCGTGGCGAGCCGCAGGCCGGTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCCGGTTTGCAGACCACC‑ATTCaatt > 1:135636/1‑146 (MQ=255) gggCGCACGCATGGCGTTCCCTTCCGGCAAATCAAGCGTGGCGAGCCGCAGGCCGGTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTGTGCGGGGTGGCGCCGGGCAGGGGTCCAGACACAC‑TTTAAtgtg > 1:1945587/1‑149 (MQ=255) gcgcACGCATGGCGTTCCCTTCCGGCAAATCAAGCGTGGCGAGCCGCAGGCCGGTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGC‑TTTCATGTgag < 1:3811202/149‑1 (MQ=255) cgcacgcaTGGCGTTCCCTTCCGGCAAATCAAGCGTGGCGAGCCGCAGGCCGGTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGC‑TTTCATGTgaga < 1:2863284/149‑1 (MQ=255) acgcaTGGCGTTCCCTTCCGGCAAATCAAGCGTGGCGAGCCGCAGGCCGGTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTGTCCGGCGTGCCGCCGGGCCGGTTTACACACCAGC‑TTTCATGTGAGGTat > 2:2259867/1‑148 (MQ=255) caTGGCGTTCCCTTCCGGCAAATCAAGCGTGGCGAGCCGCAGGCCGGTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGC‑TTTCATGTGAGATAGCgg < 1:536774/149‑1 (MQ=255) aTGGCGTTCCCTTCCGGCAAATCCAGCGTGGCGAGCCGCAGGCCGGTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGC‑TTTCATGTGAGATAGCGGt < 2:2597821/149‑1 (MQ=255) gCGTTCCCTTCCGGCAAATCAAGCGTGGCGAGCCGCAGGCCGGTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTTTGCGGCGTGCCGCCGGGCAGGTTTCCAGACCCGC‑TTTCATGTGAGATAGCGGTGAt > 2:3277068/1‑149 (MQ=255) gCGTTCCCTTCCGGCAAATCAAGCGTGGCGAGCCGCAGGCCGGTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTTTGCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGC‑TTTCATGTGAGATAGCGGTGAt > 2:2126751/1‑149 (MQ=255) ccTTCCGGCAAATCAAGCGTGGCGAGCCGCAGGCCGGTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTGTGCGGCGGGCCGCCGGGCCGGTTTGCAGACCAGC‑TGTACTTTGAGATAGGGGTGTttttgac > 1:3844937/1‑146 (MQ=255) cGGCAAATCAAGCGTGGCGAGCCGCAGGCCGGTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGC‑TTTCATGTGAGATAGCGGTGATTTTCCCGctct < 1:2218937/149‑1 (MQ=255) cGGCAAATCAAGCGTGGCGAGCCGCAGGCCGGTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGC‑TTTCATGTGAGATAGCGGTGATTTTCCCGctct < 2:1291789/149‑1 (MQ=255) cGGCAAATCAAGCGTGGCGAGCCGCAGGCCGGTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGC‑TTTCATGTGAGATAGCGGTGATTTTCCCGctct < 2:4287173/149‑1 (MQ=255) aaaTCAAGCGTGGCGAGCCGCAGGCCGGTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTGTCCGGCGTGCCGCCGGGCAGGTTTGCAGACCAGC‑GTTAATGTGAGATAGCGGGGATTTTCCCGCTCTGGTc > 2:512318/1‑149 (MQ=255) aaTCAAGCGTGGCGAGCCGCAGGCCGGTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTGTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGC‑GTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCg > 2:722943/1‑149 (MQ=255) aaTCAAGCGTGGCGAGCCGCAGGCCGGTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTGTCCGGCGGGCCCCCGGGCAGGGTTCCAGACCAGC‑GTTCATGTGAGATAGCGGTGATTTTGCCGCGCTGGTCg > 1:2458021/1‑149 (MQ=255) tCAAGCGTGGCGAGCCGCAGGCCGGTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGC‑TTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGc < 1:3895032/149‑1 (MQ=255) cAAGCGTGGCGAGCCGCAGGCCGGTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTGTACGGCGGTCCCCCGGGCCGGTTTCAAGTCCAGC‑TTTGATGTGAGATAGCGGGGTTTTTGCCGCTCTGggcggcc > 2:1121812/1‑148 (MQ=255) aGCGTGGCGAGCCGCAGGCCGGTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTGTCCGGCGGGCCGCCCGGCCCGGTTACAGACCACC‑ATTGATTTGTGTTATGGGTGGTTTTACACCACAGGTCGGcccc > 1:908863/1‑149 (MQ=255) gTGGCGAGCCGCAGGCCGGTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGC‑TTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGAt < 2:1225482/149‑1 (MQ=255) gTGGCGAGCCGCAGGCCGGTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTGTCCGGCGGGCCCCCGGGCCGGGTTGCCGACCAGC‑TTTCATGGGAGATAGCGGTGATTTTCCCGCGCTGGTAGGCACCCAt > 2:547719/1‑149 (MQ=255) gCGAGCCGCAGGCCGGTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCCGC‑TTTCATGTGAGATAGCGGTGATTTTACCGCGCTGGTCGGCACCGATACg > 2:2540732/1‑149 (MQ=255) aGCCGCAGGCCGGTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTTTTCCGCGGGACGCCCGGCCCGTTTACACAACCCC‑GTTCAATTGGGATACACGTGATTTTAACCCTCAGGTAGGCACCCATaaccaa > 2:821063/1‑144 (MQ=255) gCCGCAGGCCGGTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTGTCCGGCGTGCCCCCGGGCAGGTTTACAGACCAGC‑GTTCATGTGAGATAGCGGTGCTTTTCCCGCGCTGGTCGGCCCCCATACGCacg > 2:3960439/1‑147 (MQ=255) gCAGGCCGGTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTACAGACCAGC‑TTTAATGTTAGATATCGGTGATTTTACCGCGCTGGTCGGCACCGATACGCACGTGc > 2:2111675/1‑149 (MQ=255) cAGGCCGGTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGC‑TTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCt < 2:1128135/149‑1 (MQ=255) aGGCCGGTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTTTGCGGCGTGGCGCCCGGCACGTTTACAGACCCGC‑GTTAATGTGATATATCGGTGATTTTACCCCACAGGTCGGCCCCCATAAGCAACTGcag > 1:700483/1‑147 (MQ=255) ccGGTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGC‑TTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAg < 2:2434231/149‑1 (MQ=255) ggTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCCGGTTTCCAGACCCGC‑TTTCATTTGAGATATCGGTGATTTTAACGCGCTGGGCGGCACCCAAACGCAAGTGCTGAAggg > 2:3809198/1‑149 (MQ=255) aTGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGC‑TTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTgg < 1:2588627/149‑1 (MQ=255) tGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTGTGCGGCGGGGCGCCCGGCCCGGGTACAGACCACC‑ATTCATGTGAGTTATCGGGGGTTTTTCCCCTCGGGTGGGCCCCCGAAAGCAAGTGCGGTACGGTggc > 2:1138432/1‑149 (MQ=255) gACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGC‑TTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTggcg < 2:3407011/149‑1 (MQ=255) aCGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTGTGCCGCGTGCCCCCCGGCCGGTTTACAGAACAGC‑ATTAATTTGTGATATAGGTTATTTTAACGCTCAGGTAGGCACCGATACGCAAATGCTGAATGGTggcgg > 1:2055671/1‑149 (MQ=255) cGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTTTCCGGGGTGCCGCCGGGCAGGTTTCCAGAACAGC‑ATTCATGTGAGATAGCGGTGATTTTACCGCTCGGGTCGGCACCGATAAGCAAGTGCTGAAGGGTggcggg > 2:1723443/1‑149 (MQ=255) gATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTTTCCGGCGTGCCGCCCGGCCGGTTTCCAGACCAGC‑TTTCATGTGAGATTGCGGGGATTTTCCCGCGCAGGTCGGCCCCGATACGCAAGTGCTGAAGGGTggcgggg > 2:616814/1‑149 (MQ=255) gATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTTTACCGCGTGCCGCCCGGCACGGTTACACACCAACATTACAGGTATAAATGCGG‑GGTTTTACCCCTAAGGTCGGCCACCATACGAAACTGCTGAATGGTggcgggg > 2:579885/1‑149 (MQ=255) cGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGC‑TTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGt < 2:3214645/149‑1 (MQ=255) gCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGC‑TTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTg < 1:106334/149‑1 (MQ=255) gCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTGTCCGGCGGGCCGCCGGGCCGGGTTCCAGGCCAGC‑TTTCATGTGAGATAGCGGTGGTTTTCCCCCGCGGGTCGGCCCCCAAACGCCAGTGCGGAAGGGGggcggggcgggg > 2:2718416/1‑147 (MQ=255) ccccGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTGTGCGGCGTGCCGCCCGGCCCGGTTCCCGACCCGC‑ATTCATGTGAGATATCGGGGGTTTTACCGCTCTGGGGGGCACCGCTACGCACGTGCGGAAGGGTggcggggcggggg > 2:3748641/1‑146 (MQ=255) ggCGTAGAGTAATTCGCTTTGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGC‑TTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCgtgg < 2:1697968/149‑1 (MQ=255) ggCGTAGAGTAATTCGCTTTGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGC‑TTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCgtgg < 2:1912551/149‑1 (MQ=255) gCGTAGAGTAATTCGCTTTGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCCCGTTTACAGACCAGC‑TTTCATGTGAGATAGCGGTGATTTTACCCCTCTGGTCGGCCCCCATAAGCAAGTGCTTAAGGGTGGCGGGGCGGTGCgtggt > 2:1044070/1‑149 (MQ=255) gTAGAGTAATTCGCTTTGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGC‑TTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGgtgt < 1:1845060/149‑1 (MQ=255) tAGAGTAATTCGCTTTGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCCCC‑GTTCATGTGAGAAAGCGGGGATTTTCCCCCGCAGGTCGGCACCGAAACGCCAGTGCTGAAGGGTGGCGGGGCGGTGCGGGGGGtt > 2:1763852/1‑149 (MQ=255) agTAATTCGCTTTGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGC‑TTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTAtt < 2:447221/149‑1 (MQ=255) gTACTTCGCTTTGCTGTACCGCCGTGTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGC‑TTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTg < 2:1104326/149‑1 (MQ=255) gTAATTCGCTTTGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGC‑TTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTg < 1:3164309/149‑1 (MQ=255) tAATTCGCTTTGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGC‑TTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTgg < 1:3435724/149‑1 (MQ=255) aTTCGCTTTGCTGTACCGCCGTTTACGGCGTGCCCCCCGGCAGGTTTCCAGAACACC‑TTTCATGGGAGATAGCGGTGATTTTACCGCGCTGGGGGGCACCCATACGCAACTGCTGTAGGGTGGCGGGGCGGGGCGTGGTGTTATTGGGa > 2:4041787/1‑149 (MQ=255) ttCGCTTTGCTGTACCGCCGTGTGCCGGGTGCCGCCCCGCAGGTTTCCAGACCACC‑GATCAATTTGTATAAAGGGTGTTTTTCCGCGCGGGTAGGCACCGATAACCCACTGGAGTAGGGTGGGGGGGCGGTGCGGGGGGTTTTTgggga > 2:3722727/1‑147 (MQ=255) ttCGCTTTGCTGTACCGCCGTGTGAGGCGTGCCCCCGGGCCGGTTTACACACCACC‑TTTAATGTGAGATATCGGTGGTTTTACCGCGCTGGTCGGCACCGAAACGCAACTGCTGAAGGGTGGCGGGGCGGGGCGGGGGGTTTTTGGGac > 2:2274174/1‑148 (MQ=255) tCGCTTTGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGC‑TTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAAt < 2:681413/149‑1 (MQ=255) tCGCTTTGCTGTACCGCCGTGTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGC‑TTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAAt < 2:2827160/149‑1 (MQ=255) tCGCTTTGCTGTACCGCCGGTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGC‑TTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAAt < 2:3214761/149‑1 (MQ=255) cGCTTTGCTGGACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGC‑TTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATa < 2:2054276/149‑1 (MQ=255) cTTTGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGC‑TTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATaga < 1:167657/149‑1 (MQ=255) cTTTGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGC‑TTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATaga < 1:3870257/149‑1 (MQ=255) cTTTGCTGTACCGCCGTTTACGGCGTGCCGCCCGGCAGGTTTACACAACACC‑ATTCAAGTGAGATAGCGGGGCTTTTACCCCACGGGTCGGCCCCCATAAGCAACTGCTGAACGGGGGCGGGGCGGGGCGGGGTGTTATTGGGACTaga > 2:3079844/1‑149 (MQ=255) tttGCTGTACCGCCGTTTACGGCGTGCCGCCGGGCCGGTTTACAGACCAGC‑TTTAATTTGTGATAGAGGTGATTTTACCGCTCTGGTCGGCACCGATACGCAATTGCTGAATGGTGGGGGGGCGGTGGGTGGTGGTTTTGTGtatatat > 2:2354498/1‑146 (MQ=255) tttGCTGTACCGCCGTTTACGGCGTGCCGCCGGGCCCGTTTCCAGACCAGC‑TTTCAAGTGAGATAGCGGTGATTTTACCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATagag > 2:2567091/1‑149 (MQ=255) tGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGC‑TTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAggg < 1:4370848/149‑1 (MQ=255) cTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGC‑TTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGc < 2:2301817/149‑1 (MQ=255) gTACCGCCGTTTCCGGCCTGCCGCCGGGCAGGTTTCCAGACCACC‑TTTCAAGTGAGAAAGCGGTGAATTTACCGCTCAGGTCGGCCCCGATAACCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAAAAGAGGGGCgg > 2:2907060/1‑149 (MQ=255) tACCGCCGTTTGCCGCGTTCCGCCCGGGAGGTTTCAAGACCAGC‑ATTAATTTGAGATAACGGTGATTTTCACCCTCTGGTCGGCACCCCTACGCAAGTGCTGAAGGGTGGCGGGGCCGGGCGTGGTGTTATTGGGAATAGAcgggcggg > 2:636211/1‑149 (MQ=255) aCCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGC‑TTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGCgggg < 2:1431714/149‑1 (MQ=255) ccgccgTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGC‑TTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGCggggg < 2:3613278/149‑1 (MQ=255) ccgccgTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGC‑TTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGCggggg < 2:1603592/149‑1 (MQ=255) ccgccgTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGC‑TTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGCggggg < 2:3998777/149‑1 (MQ=255) cgTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGC‑TTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGCGGGGGAGCa < 1:662217/149‑1 (MQ=255) gTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGC‑TTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGCGGGGGAGCAt < 1:2814925/149‑1 (MQ=255) tttCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGC‑TTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGCGGGGGAGCATc > 1:3350487/1‑149 (MQ=255) ttCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGC‑TTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGCGGGGGAGCATCa > 1:4336718/1‑149 (MQ=255) | CGTCGATCGCGATTTCGAGCGCCATCAGACCGGGGGCTTCGCCGGGCGCACGCATGGCGTTCCCTTCCGGCAAATCAAGCGTGGCGAGCCGCAGGCCGGTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGC‑TTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGCGGGGGAGCATCA > CP009273/295547‑295843 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |