| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,212,582 | C→A | 10.1% | intergenic (+130/‑202) | ymgC → / → ycgG | Blue light, low temperature and stress induced protein/putative membrane‑anchored cyclic‑di‑GMP phosphodiesterase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,212,582 | 0 | C | A | 10.1% | 519.9 / 6.6 | 169 | intergenic (+130/‑202) | ymgC/ycgG | Blue light, low temperature and stress induced protein/putative membrane‑anchored cyclic‑di‑GMP phosphodiesterase |
| Reads supporting (aligned to +/- strand): ref base C (97/48); new base A (2/22); total (99/70) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.08e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 169 total aligned reads displayed.
ATCCGTGCTCTCTTAGAACTTGAGTAAGGTTTTAGAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTCCGCAATATCAGGTGTCAAGAATGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTAGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATGCCAG > CP009273/1212437‑1212728 | aTCCGTGCTCTCTTAGAACTTGAGTAAGGTTTTAGAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTCCGCAATATCAGGTGTCAAGAATGGAGAGTTCTCGCTCTCCAtt > 1:32589/1‑149 (MQ=255)aTCCGTGCTCTCTTAGAACTTGAGTAAGGTGTTAGAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGGTTTCTTATTATGTCCGCAATATCAGGTGTCAAGAATGGAGAGTTCTCGCTCTCCAtt > 2:465105/1‑149 (MQ=255) ccGTGCTCTCTTAGAACTTGAGTAAGGTTTTAGAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTCCGCAATATCAGGTGTCAAGAATGGAGAGTTCTCGCTCTCCATTCt > 2:1414689/1‑149 (MQ=255) ccGTGCTCTCTTAGAACTTGAGTAAGGTTTTAGAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTCCGCAATATCAGGTGTCAAGAATGGAGAGTTCTCGCTCTCCATTCt > 2:3637730/1‑149 (MQ=255) ccGTGCTCTCTTAGAACTTGAGTAAGGTTTTAGAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTCCGCAATATCAGGTGTCAAGAATGGAGAGTTCTCGCTCTCCATTCt < 2:2876436/149‑1 (MQ=255) tGCTCTCTTAGAACTTGAGTAAGGTTTTAGAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTCCGCAATATCAGGTGTCAAGAATGGAGAGTTCTCGCTCTCCATTCTTGa > 1:606191/1‑149 (MQ=255) tGCTCTCTTAGAACTTGAGTAAGGTTTTAGAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTCCGCAATATCAGGTGTCAAGAATGGAGAGTTCTCGCTCTCCATTCTTGa > 2:4269938/1‑149 (MQ=255) tctctTTGAATTTGAGTTTGGTTTTATTATAAACATCTGCTGTATCACCATTCTGATGCAAAGTGAGCTTTTCTGGCGTTATGCTTTCTTATTATGTCCGCTATATCAGGTGTCAATAATGGTGTGTTCTCGCTCTCCATTCTTGACGc < 2:1319355/149‑1 (MQ=255) aGAACTTGAGTATGGTTTTAGAATAACCATCAGCTGTATCACCCTGCTGATGCAATGTGAGCTTTTCAGGCGTTATGCTTTCTTATTATGTCCGCATTATCTGGTGTCAAGAATGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGata < 2:1730043/149‑1 (MQ=255) aGAACTGGAGTCTGGTTTTATAATAAACATCAGCTGTATCACCTTGCTGAGGCAACGTGAGCTTTTCCGGGGTTAGGTTTTCTTTTTTTGTCCGAAATATCTGGTGTCAAGATTGGAGAGTTCTCGCTCACAATTCTTGACGCCTGata < 2:70076/149‑1 (MQ=255) gAACTTGAGTAAGGTTTTAGAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTCCGCAATATCAGGTGTCAAGAATGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGatat > 2:804366/1‑149 (MQ=255) gAACTTGAGTAAGGTTTTAGAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTCCGCAATATCAGGTGTCAAGAATGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGatat > 2:804347/1‑149 (MQ=255) ttGAGTAAGGTTTTAGAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTCCGCAATATCAGGTGTCAAGAATGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCg > 1:73263/1‑149 (MQ=255) gTAAGGTTTTAGAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTCCGCAATATCAGGTGTCAAGAATGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTa > 2:2771995/1‑149 (MQ=255) gTAAGGTTTTAGAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTCCGCAATATCAGGTGTCAAGAATGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTa > 2:2232910/1‑149 (MQ=255) aaGGTTTTAGAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTTTTTTGTCCGCAATATCCGGTGTAAAGATTGGAGAGTTCTCGCACTCAATTCTTGACGCCTGATATCCCGCCTAAc < 2:224519/149‑1 (MQ=255) tttttATAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGTGAATTTCAGGCGTTATGCTTTCTTATTATGTCCGCAATATCAGGTGTCAAGAATGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTa < 2:653337/148‑1 (MQ=255) gTTTTATAATAAACATCAGCTGTATCACCAGGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTTTTATGTCCGCAATATCAGGTGTCAAGAAGGGAGAGTTCCCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTa < 2:653358/149‑1 (MQ=255) gTTTTAGAATAAACATCAGCTGTATCACCTTGCTTATGCAAAGTGAGAATTTCCGGCTTTATGCTTTCTTATTATGTCCGCAATATCTGGTGTAAAGATTGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTa < 2:3030553/149‑1 (MQ=255) gAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTCCGCAATATCAGGTGTCAAGAATGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGt > 2:249667/1‑149 (MQ=255) gAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTCCGCAATATCAGGTGTCAAGAATGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGt > 2:2452380/1‑149 (MQ=255) gAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTCCGCAATATCAGGTGTCAAGAATGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGt > 1:3692468/1‑149 (MQ=255) aTAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTCCGCAATATCAGGTGTCAAGAATGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTAc > 1:3502979/1‑149 (MQ=255) aaaCATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGGTATGCTGTCGTATTATGTCCGCAATATCAGGTGTCAAGACTGGAGAGTTCTCGCTCTCCCGTCTTGACGCCTGATCTCCCGCCTAACTTATTTTGTACTg > 2:97684/1‑149 (MQ=255) aaCATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTCCGCAATATCAGGTGTCAAGAATGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGc > 1:3062728/1‑149 (MQ=255) aCATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTCCGCAATATCAGGTGTCAAGAATGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGcc > 1:2562484/1‑149 (MQ=255) cATCAGCTGTATCACCATGCTGTTGCAACGTGAGAATTTCAGGCGTTTTGCTTTCTTATTATGTCCGCAATATCTGGTGTCAAGAATGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCt < 2:2393780/149‑1 (MQ=255) tCAGCTGTATCACCCTGGTTTGGCAAAGTGAGCATGTCTGGCGTTATGCTTTCTAATTAGGGCCGCAATATCCGGTGTCAAGATTGGAGAGTTCGCGCTCTCCTTTATTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTAc < 2:3445032/149‑1 (MQ=255) tCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTCCGCAATATCAGGTGTCAAGAATGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTAc > 1:4220968/1‑149 (MQ=255) tCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTCCGCAATATCAGGTGTCAAGAATGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTAc > 1:1257302/1‑149 (MQ=255) tCAGCTGTATCACAATGCTTTTGCAAAGTGAGCTTTTCTGGCTTTATGATTTATTATTATGTCCGAAATATCCGGTGTCAAGATTGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTAc < 2:3445044/149‑1 (MQ=255) cAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTCCGCAATATCAGGTGTCAAGAATGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACa > 2:833245/1‑149 (MQ=255) gCTGTAGCACCAGGATTTTGCAATGTGTGCTTTTCTGGCTTTTTTTTTTGTTATTTTGTCCGAATTATCTGTTTTAAATTTTTGTTTGTTGTCGCTCTACTTTCTGGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACAtt < 1:2827235/149‑1 (MQ=255) cTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTCCGCAATATCAGGTGTCAAGAATGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTa > 2:1105778/1‑149 (MQ=255) taacACCTTGCTTATGCAAGGTTATCTTTTCTGGGTTTTTGCTTTCTTTTTATTTCCGAAATTTCAGGTTTCATTATTGGTGAGTTCTCGCTCTCAATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGc < 1:174865/146‑1 (MQ=255) cACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTCCGCAATATCAGGTGTCAAGAATGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCa > 1:4204571/1‑149 (MQ=255) cACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTCCGCAATATCAGGTGTCAAGAATGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCa > 1:4204534/1‑149 (MQ=255) cTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTCCGCAATATCAGGTGTCAAGAATGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAAtaatta > 1:1975814/1‑149 (MQ=255) gATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTCCGCAATATCAGGTGTCAAGAATGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAAtaattaat > 1:2833688/1‑149 (MQ=255) aTGCAACGTGAGCTTTTCTGGCGTTTTGCTTTCTTATTATGTCCGCAATATCAGGTGTCAAGAAGGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATg < 2:194404/149‑1 (MQ=255) aTGCAAATTGAGCATTTCTGGCGTTATGCTTTCTTATTATTGCCGCATTATCTGGTGTAAAGAATGGAGATTTCTCGCTCACCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATg < 2:194292/149‑1 (MQ=255) gCAAAGTGAGATTTACAGGCTTTATGGTTTATTATTATGTCCGCAATATCTGGTGTCACGATTGGAGTGTTCGCGCTCTCAATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATggg < 1:2836540/149‑1 (MQ=255) aatgTGAGCATTCCAGGCGTTTTGCTTTCTTATTATGTCCGCAATAGCCGGTGTCAAGAATGGAGTGTTCTCGCACTCCTTTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGtt < 2:3103849/146‑1 (MQ=255) aaaGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTCCGCAATATCAGGTGTCAAGAATGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGtt > 1:3196615/1‑149 (MQ=255) aaaGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTCCGCAATATCAGGTGTCAAGAATGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAACGGGtt > 1:981564/1‑149 (MQ=255) aaaGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGGCCGCAATATCAGGTGTCAAGAATGGAGAGTTCTCGCTCGCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGtt < 2:1764063/149‑1 (MQ=255) cgTGCGCATTTCTGGCGTTTTGCTGTGTTTTTAGGTCCGCAATCTCCGGTGTCAAGATTGGAGTGTTCGCGCTCTCCTTTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTAg < 2:2508627/148‑1 (MQ=255) gTGAGCATTTCTGGCGTTTTGCTTTATTATTATGTCCGCAATATCTGGTGTCAATAATGGATAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTAGa < 2:365905/149‑1 (MQ=255) gtatcttttCTGGCTTTATGCTTTATTTTTATGTCCGAAATATCTGTTGTCAAGAAGGGCTTTTTCTCGCTCTCAATTGTTCACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTAGAt < 2:2207418/143‑1 (MQ=255) gCATTTCCGGCGTTATGCTTTCTTATTATGGCCGCAATATCAGGTGTAAAGAATGGAGTGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTAGATCaa < 2:3848020/149‑1 (MQ=255) cttttCTGGCGTTATGCTTTCTTATTATGTCCGCAATATCAGGTGAAAAGAATGGAGTGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTAGATCAAg < 2:1682479/147‑1 (MQ=255) ttttCAGGCGTTATGATTTCTTATTTTGTCCGAATTTTCGGTTGCCAATAATGGTGTGTTCCCGCTCTCATTTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTAGATCAAGa < 2:1110964/148‑1 (MQ=255) tttCTGGCGTTATGGTTTCTTATTATGTCCGCAATTTCAGGTGTCAAGAATGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTAGATCAAGAt < 2:1615099/149‑1 (MQ=255) ttCAGGCGTTATGCTTTCTTATTATGTCCGCAATATCCGGTGTCACGATGGGAGTTTTCTCGCTCCCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTAGATCAAGATg < 1:2900360/149‑1 (MQ=255) tCAGGCGTTATGCTTTCTTATTATTTCCGCAATATCAGGTGTCAAGAATGGAGAGTTCTCGCTCTCAATTCTTGACGCCTGATATACCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTAAGATCAAGATgg > 2:3714832/1‑149 (MQ=255) gTTATGCTTTCTTATTATGTCCGCAATATCAGGTGTCAAGAATGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTAGATCAAGATGGAGaaaa > 2:1344128/1‑149 (MQ=255) gTTATGCTTTCTTATTATGTCCGCAATATCAGGTGTCAAGAATGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTAGATCAAGATGGAGaaaa > 2:4062903/1‑149 (MQ=255) ttATGCTTTCTTATTATGTCCGCAATATCAGGTGTCAAGAATGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTAGATCAAGATGGAGAAAAt > 2:3603601/1‑149 (MQ=255) tttttttCTTATTTTGTCCGAAATTTGTGGTGTAAAGTTGGGCTGTTTCTCGCACCACTTTATTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTAGATCAAGATGGAGAAAAttt < 1:493773/145‑1 (MQ=255) aggttttCTTTTTACGCCCTCAATATCAGGGTTCAACATTGGAGAGTTCCCGCACACCATTCTGCACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTAGATCAAGATGGAGAAAAttt < 1:493766/145‑1 (MQ=255) ttCTTATTATGTCCGCAATATCAGGTGTCAAGAATGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTAGATCAAGATGGAGAAAATTTTATCt > 1:3048557/1‑149 (MQ=255) ttCTTATTATGTCCGCAATATCAGGTGTCAAGAATGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTAGATCAAGATGGAGAAAATTTTATCt > 1:1940716/1‑149 (MQ=255) ttttattaTGTCCGAAATATCCGGTGCCAAGATTGTATTGTTCTCGCTCACCATTCTTCACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTAGATCAAGATGGAGAAAATTTTATCtt < 1:1580841/147‑1 (MQ=255) tattattaGGCCCCCAATACCCGGTGACAACAATGGAGCGTTCTCGCTCACAATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTAGATCAAGATGGAGAAAATTTTATCtt < 1:2514485/147‑1 (MQ=255) tCTTATTATGTCCGCAATATCAGGTGTCAAGAATGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTAGATCAAGATGGAGAAAATTTTATCtt > 2:1451307/1‑149 (MQ=255) cTTATTATGTCCGCAATATCAGGTGTCAAGAATGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTAGATCAAGATGGAGAAAATTTTATCTTc > 2:1046643/1‑149 (MQ=255) ttattaTGTCCGCAATATCAGGTGTCAAGAATGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTAGATCAAGATGGAGAAAATTTTATCTTCg > 1:2095207/1‑149 (MQ=255) tatGTCCGCAATATCTGGTTACAATAATGGAGAGTTCTCGCTCACAATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTAGATCAAGATGGAGAAAATTTTATCTTCGGCGt < 1:1010136/149‑1 (MQ=255) tatGTCCGCAATATCAGGTGTCAAGAATGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTAGATCAAGATGGAGAAAATTTTATCTTCGGCGt > 2:3496336/1‑149 (MQ=255) atGTCCGCAATATCAGGTGTCAAGAATGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTAGATCAAGATGGAGAAAATTTTATATTCGGCGTg > 1:410981/1‑149 (MQ=255) tGTCCGCAATATCAGGTGTCAAGAATGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTAGATCAAGATGGAGAAAATTTTATCTTCGGCGTgg > 2:534581/1‑149 (MQ=255) gCAATATCAGGTGTCAAGAATGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTAGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATAtt > 1:1533841/1‑149 (MQ=255) gCAATATCAGGTGTCAAGAATGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTAGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATAtt > 1:3755406/1‑149 (MQ=255) aaTATCAGTTGTCAAGAATGGAGAGTTCTCGCACTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTAGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTc < 2:1180378/149‑1 (MQ=255) tatCAGGTGTCAAGAATGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTAGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCtt > 1:2796076/1‑149 (MQ=255) tatCAGGTGTCAAGAATGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTAGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCtt > 1:2356522/1‑149 (MQ=255) atCTGGTGTCAAGAATGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTAGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTa < 2:2328742/149‑1 (MQ=255) atCAGGTGTCAAGAATGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTAGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTa > 1:3151680/1‑149 (MQ=255) tCAGGTGTCAAGAATGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTAGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTAt < 2:3179256/149‑1 (MQ=255) tgtCAAGATTGGAGAGGGCTCGCTCCCATTTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTAGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGctct < 1:2304533/149‑1 (MQ=255) gtCAAGAATGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTAGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGctctc > 1:220170/1‑149 (MQ=255) tCAAGAATGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTAGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGctctct > 1:1205442/1‑149 (MQ=255) cAAGAATGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTAGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTa > 2:1988995/1‑149 (MQ=255) aGAATGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTAGATCAAGATTTAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTAcc > 1:108418/1‑149 (MQ=255) aGAATGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTAGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTAcc > 1:1262503/1‑149 (MQ=255) aGAATGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTAGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTAcc > 1:2022481/1‑149 (MQ=255) gAATGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTAGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCa < 2:2022481/149‑1 (MQ=255) gAATGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTAGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCa > 2:3228600/1‑149 (MQ=255) gAATGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTAGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCa < 2:2022378/149‑1 (MQ=255) gAATGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATCCTCAATAATTAATGGGTTAGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCa > 2:3054935/1‑149 (MQ=255) aaTGGTGAGTGCTCGCTCTCATTTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTAGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCAt < 1:1989583/149‑1 (MQ=255) ggAGATTTCTGGCTCTCAATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCCCAATAATTAATGGGTTAGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGct < 1:1008998/149‑1 (MQ=255) gTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTAGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTg < 1:151392/149‑1 (MQ=255) gTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTAGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTg > 1:166560/1‑149 (MQ=255) tctcGCTCTCCTTTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTAGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTa < 1:1594988/149‑1 (MQ=255) cGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTAGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGAt > 1:1891417/1‑149 (MQ=255) gCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTAGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATg > 2:4159192/1‑149 (MQ=255) tctcCATTATTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTAGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATGcc < 2:2102984/149‑1 (MQ=255) ctcCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTAGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATGCCa > 2:451327/1‑149 (MQ=255) tcCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTAGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATGCCAg > 1:3605911/1‑149 (MQ=255) | ATCCGTGCTCTCTTAGAACTTGAGTAAGGTTTTAGAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTCCGCAATATCAGGTGTCAAGAATGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTAGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATGCCAG > CP009273/1212437‑1212728 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |