| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,036,746 | G→T | 7.3% | intergenic (+367/+203) | yodB → / ← serU | cytochrome b561 homolog/tRNA‑Ser |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,036,746 | 0 | G | T | 7.3% | 605.7 / 3.1 | 193 | intergenic (+367/+203) | yodB/serU | cytochrome b561 homolog/tRNA‑Ser |
| Reads supporting (aligned to +/- strand): ref base G (99/69); new base T (2/23); total (101/92) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.43e-06 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 195 total aligned reads displayed.
AACAACTCTTGGAAATTATGGACTTTGTCCCGCGGCTTTAATCTGACGGCCGCGTTCCTTTTTTGACTCAATTATTGAACCCTTCTCTACGCAACTTCAGTTCCCACCACCAACTTTGCGGCAGTTTCATAGGATGAATGTCTAAAAGAATAATGGTGAGCGATAAGAAAACGACTGAATAACTGCACATTTTCGCTCGAAAGCTTCCTGTCAGATCCATAGCGAATCAAGTGCTGAATGTCACAGTATCGAACAGAAAACAGTGACGATCTAACCCTTCAAGAATATTCTACGAT > CP009273/2036599‑2036894 | aacaacTCTTGGAAATTATGGACTTTGTCCCGCGTCTTTAATCTGACGGCCGCGTTACTTTTTTGAATCAATTATTGAAACCTTCTCTACTCAACTTCAGTTCCAAACACAAACTTTGCGGCAGTTTCATAGGATGAATGTCTAAAAGa > 2:826184/1‑149 (MQ=255)aacaacTCTTGGAAATTATGGACTTTGTCCCGCGGCTTTAATCTGACGGCCGCGTTCCTTTTTTGACTCAATTATTGAACCCTTCTCTACGCAACTTCAGTTCCCACCACCAACTTTGCGGCAGTTTCATAGGATGAATGTCTAAAAGa > 1:1336666/1‑149 (MQ=255) acaacTCTTGGAAATTATGGACTTTGTCCCGCGGCTTTAATCTGACGGCCGCGTTCCTTTTTTGACTCAATTATTGAACCCTTCTCTACGCAACTTCAGTTCCCACCACCAACTTTGCGGCAGTTTCATAGGATGAATGTCTAAAAGaa > 1:2806377/1‑149 (MQ=255) caacTCTTGGAAATTATGGACTTTGTCCCGCGGCTTTAATCTGACGGCCGCGTTCCTTTTTTGACTCAATTATTGAACCCTTCTCTACGCAACTTCAGTTCCCACCACCAACTTTGCGGCAGTTTCATAGGATGAATGTCTAAAAGaat < 1:3072363/149‑1 (MQ=255) caacTCTTGGAAATTATGGACTTTGTCCCGCGGCTTTAATCTGACGGCCGCGTTCCTTTTTTGACTCAATTATTGAACCCATCTCAACGCAACTTAAGTTCCCACCACCAACATTGCGGCAGTTTCATAGGATGAATGTCTAAAATaaa > 1:2600705/1‑148 (MQ=255) aacTCTTGGAAATTATGGACTTTGTCCCGCGGCTTTAATCTGACGGCCGCGTTCCTTTTTTGACTCAATTATTGAACCCTTCTCTACGCAACTTCAGTTCCCACCACCAACTTTGCGGCAGTTTCATAGGATGAATGTCTAAAAGaata < 2:3263845/149‑1 (MQ=255) acTCTTGGAAATTATGGACTTTGTCCCGCGGCTTTAATCTGACGGCCGCGTTCCTTTTTTGACTCAATTATTGAACCCTTCTCTACGCAACTTCAGTTCCCACCACCAACTTTGCGGCAGTTTCATAGGATGAATGTCTAAAAGaataa < 1:2402489/149‑1 (MQ=255) tGGAAATTATGGACTTTGTCCCGCGGCTTTAATCTGACGGCCGCGTTCCTTTTTTGTCTCAATTATTGAACCCTTCTCTACGCAACTTCAGTTCCCACCACCAACTTTGCGGCAGTTTCATAGGATGAATGTCTAAAAGAATAATGGTg < 2:4129237/149‑1 (MQ=255) tGGAAATTATGGACTTTGTCCCGCGGCTTTAATCTGACGGCCGCGTTCCTTTTTTGACTCAATTATTGAACCCTTCTCTACGCAACTTCAGTTCCCACCACCAACTTTGCGGCAGTTTCATAGGATGAATGTCTAAAAGAATAATGGTg < 2:3323443/149‑1 (MQ=255) gAAATTATGGACTTTGTCCCGCGGCTTTAATCTGACGGCCGCGTTCCTTTTTTGACTCAATTGTTGAACCCTTCTCTACGCAACTTCAGTTCCCACCACCAACTTTGCGGCAGTTTCATAGGATGAATGTCTAAAAGAATAATGGTGAg > 2:4343348/1‑149 (MQ=255) aaaTTATGGACTTTGTCCCGCGGCTTTAATCTGACGGCCGCGTTCCTTTTTTGACTCAATTATTGAACCCTTCTCTACGCAACTTCAGTTCCCACCACCCACTTTGCGGCAGTTTCAGAGGATGAATGTCTAAAAGAATAATGGTGAGc > 1:59318/1‑149 (MQ=255) ttATGGACTTTGTCCCGCGGCTTTAATCTGACGGCCGCGTTCCTTTTTTGACTCAATTATTGAACCCTTCTCTACGCAACTTCAGTTCCCACCACCAACTTTGCGGCAGTTTCATAGGATGAATGTCTAAAAGAATAATGGTGAGCGAt < 1:1776413/149‑1 (MQ=255) ttATGGACTTTGTCCCGCGGCTTTAATCTGACGGCCGCGTTCCTTTTTTGACTCAATTATTGAACCCTTCTCTACGCAACTTCAGTTCCCACCACCAACTTTGCGGCAGTTTCATAGGATGAATGTCTAAAAGAATAATGGTGAGCGAt < 1:3385680/149‑1 (MQ=255) ttATGGACTTTGTCCCGCGGCTTTAATCTGACGGCCGCGTTCCTTTTTTGACTCAATTATTGAACCCTTCTCTACGCAACTTCAGTTCCCACCACCAACTTTGCGGCAGTTTCATAGGATGAATGTCTAAAAGAATAATGGTGAGCGAt < 2:2842776/149‑1 (MQ=255) ttATGGACTTTGTCCCGCGGCTTTAATCTGACGGCCGCGTTCCTTTTTTGACTCAATTATTGAACCCTTCTCTACGCAACTTCAGTTCCCACCACCAACTTTGCGGCAGTTTCATAGGATGAATGTCTAAAAGAATAATGGTGAGCGAt < 2:2357971/149‑1 (MQ=255) tATGGACTTTGTCCCGCGGCTTTAATCTGACGGCCGCGTTCCTTTTTTGACTCAATTATTGAACCCTTCTCTACGCAACTTCAGTTCCCACCACCAACTTTGCGGCAGTTTCATAGGATGAATGTCTAAAAGAATAATGGTGAGCGATa < 2:1709315/149‑1 (MQ=255) tATGGACTTTGTCCCGCGGCTTTAATCTGACGGCCGCGTTACTTTTTTGACTCAATTATTGTACCCTTCTCTAAGCAACTTCAGTTCCCACCCCCAACATTGCGGCAGTTTCATAGGATGAATGTGTAAAAGAATAATGGTGTGCGATa > 1:1136954/1‑149 (MQ=255) ggACTTTGTCCCGCGGCTTTAATCTGACGGCCGCGTTCCTTTTTTGACTCAATTATTGAACCCTTCTCTACGCAACTTCAGTTCCCACCACCAACTTTGCGGCAGTTTCATAGGATGAATGTCTAAAAGAATAATGGTGAGCGATAAGa < 1:1937142/149‑1 (MQ=255) aCTTTGTCCCGCGGCTTTAATCTGACGGCCGCGTTCCTTTTTTGACTCAATTATTGAACCCTTCTCTACGCAACTTCAGTTCCCACCACCAACTTTGCGGCAGTTTCATAGGATGAATGTCTAAAAGAATAATGGTGAGCGATAAGaaa < 2:4421493/149‑1 (MQ=255) aCTTTGTCCCGCGGCTTTAATCTGACGGCCGCGTTCCTTTTTTGACTCAATTATTGAACCCTTCTCTACGCAACTTCAGTTCCCACCACCAACTTTGCGGCAGTTTCATAGGATGAATGTCTAAAAGAATAATGGTGAGCGATAAGaaa < 2:1898527/149‑1 (MQ=255) aCTTTGTCCCGCGGCTTTAATCTGACGGCCGCGTTCCTTTTTTGACTCAATTATTGAACCCTTCTCTACGCAACTTCAGTTCCCACCACCAACTTTGCGGCAGTTTCATAGGATGAATGTCTAAAAGAATAATGGTGAGCGATAAGaaa < 2:4421077/149‑1 (MQ=255) cgtcTTTAATCTGACGGCCGCGTTCTTTTTTTGAATAATTTATTGAACCCTTCTCTACGCAACTTCAGTTCCCACCACCAACTTTGCGGCAGTTTCATTGGATTATTGTCTAAAATAATATTGGTGAGCGTTAAGAAAACGACTGAATa < 2:2626486/146‑1 (MQ=255) gCTTTAATCTGACGGCCGCGTTCCTTTTTTGACTCAATTATTGAACCCTTCTCTACGCAACTTCAGTTCCCACCACCAACTTTGCGGCAGTTTCATAGGATGAATGTCTAAAAGAATAATGGTGAGCGATAAGAAAACGACTGAATAAc > 1:1605383/1‑149 (MQ=255) ttAATCTGACGGCCGCGTTCCTTTTTTGACTCAATTATTGAACCCTTCTCTACGCAACTTCAGTTCCCACCACCAACTTTGCGGCAGTTTAATAGGATGAATGTCTAAAAGAATAATGGTGATCGATAAGAAAACGACTGAATAACTGc > 1:2963745/1‑149 (MQ=255) aTCTGACGGCCGCGTTCCTTTTTTGACTCAATTATTGAACCCTTCTCTACGCAACTTCAGTTCCCACCACCAACTTTGCGGCAGTTTCATAGGATGAATGTCTAAAAGAATAATGGTGAGCGATAAGAAAACGACTGAATAACTGcaca > 1:4001582/1‑149 (MQ=255) tGACGGCCGGGTTCCTTTTTTGACTCAATTATTGAACCCTTCTCTACGCAACTTCAGTTCCCACCACCAACTTGGCGGCAGTTTCATAGGATGAATGTCTAAAAGAATAATGGTGAGCGTTAAGACAACGACTGAATAACTGCACAttt < 2:2915709/149‑1 (MQ=255) tGACGGCCGCGTTCCTTTTTTGACTCAATTATTGAACCCTTCTCTACGCAACTTCAGTTCCCACCACCAACTTTGCGGCAGTTTCATAGGATGAATGTCTAAAAGAATAATGGTGAGCGATAAGAAAACGACTGAATAACTGCACAttt > 1:2116021/1‑149 (MQ=255) tGACGGCCGCGTTCCTTTTTTGACTCAATTATTGAACCCTTCTCTACGCAACTTCAGTTCCCACCACCAACTTTGCGGCAGTTTCATAGGATGAATGTCTAAAAGAATAATGGTGAGCGATAAGAAAACGACTGAATAACTGCACAttt > 2:4281434/1‑149 (MQ=255) aCGGCCGCGTTCCTTTTTTGACTCAATTATTGAACCCTTCTCTACGCAACTTCAGTTCCCACCACCAACTTTGCGGCAGTTTCATAGGATGAATGTCTAAAAGAATAATGGTGAGCGATAAGAAAACGACTGAATAACTGCACATTTTc < 2:1298849/149‑1 (MQ=255) gCCGCGTTCCTTTTTTGACTCAATTATTGAACCCTTCTCTACGCAACTTCAGTTCCCACCACCAACTTTGCGGCAGTTTCATAGGATGAATGTCTAAAAGAATAATGGTGAGCGATAAGAAAACGACTGAATAACTGCACATTTTCGCt > 2:1524177/1‑149 (MQ=255) gTTCCTTTTTTGACTCAATTATTGAACCCTTCTCTACGCAACTTCAGTTCCCACCACCAACTTTGCGGCAGTTTCATAGTATGAATGTCTAAAAGAATAATGGTGAGCGATAAGAAAACGACTGAATAACTGCACATTTTCGCTCGaaa < 2:3406287/149‑1 (MQ=255) ttCCTTTTTTGACTCAATTATTGAACCCTTCTCTACGCAACTTCAGTTCCCACCACCAACTTTGCGGCAGTTTCATAGGATGAATGTCTAAAAGAATAATGGTGAGCGATAAGAACACGACTGAATAACTGCACATTTTCGCTCGAAAg > 2:2235123/1‑149 (MQ=255) tCCTTTTTTGACTCAATTATTGAACCCTTCTCTACGCAACTTCAGTTCCCACCACCAACTTTGCGGCAGTTTCATAGGATGAATGTCTAAAAGAATAATGGTGAGCGATAAGAAAACGACTGAATAACTGCACATTTTCGCTCGAAAGc > 1:331021/1‑149 (MQ=255) cTTTTTTGACTCAATTATTGAACCCTAATCTACGCATGTACAGGTCCCACCACCATCTTTGCGGATGTTTCTTTGTATGATTGTATAAATTAATAATGGTGAGCGATAAGAAATCGACTGAATAACTGCACATTTTCGCTCGAAAGCtt < 1:2899573/149‑1 (MQ=255) ttttttTAATAAATTTTTGACCCCTTCTCTACGCAACTTCAGTTCCCACCACCAACTTTGCGGCTTTTTAATAGTTTTATTTTATAAAATATTAATGGTGCGCGATAAGAAAACGACTGAATAACTGCACATTTTCGCTCGAAAGCTTc < 1:4105449/149‑1 (MQ=255) ttttttGACTCAATTATTGAACCCTTCTCTACGCAACTTCAGTTCCCACCACCAACTTTGCGGCAGTTTCATAGGATGAATGTCTAAAAGAATAATGGTGAGCGATAAGAAAACGACTGAATAACTGCACATTTTCGCTCGAAAGCTTc > 2:2585189/1‑149 (MQ=255) ttttttGACTCAATTATTGAACCCTTCTCTACGCAACTTCAGTTCCCACCACCAACTTTGCGGCAGTTTCATAGGATGAATGTCTAAAAGAATAATGGTGAGCGATAAGAAAACGACTGAATAACTGCACATTTTCGCTCGAAAGCTTc > 1:2650785/1‑149 (MQ=255) ttttttGACTCAATTATTGAACCCTTCTCTACGCAACTTCAGTTCCCACCACCAACTTTGCGGCAGTTTCATAGGATGAATGTCTAAAAGAATAATGGTGAGCGATAAGAAAACGACTGAATAACTGCACATTTTCGCTCGAAAGCTTc > 1:2651437/1‑149 (MQ=255) gACTCAATTATTGAACCCTTCTCTACGCAACTTCAGTTCCCACCACCAACTTTGCGGCAGTTTCATAGGATGAATGTCTAAAAGAATAATGGTGAGCGATAAGAAAACGACTGAATAACTGCACATTTTCGCTCGAAAGCTTCCTGTCa > 2:943630/1‑149 (MQ=255) cTCAATTATTGAACCCTTCTCTACGCAACTTCAGTTCCCACCACCAACTTTGCGGCAGTTTCATAGGATGAATGTCTAAAAGAATAATGGTGAGCGATAAGAAAACGACTGAATAACTGCACATTTTCGCTCGAAAGCTTCCTGTCAGa > 2:594352/1‑149 (MQ=255) cAATTATTGAACCCTTCTCTACGCAACTTCAGTTCCCACCACCAACTTTGCGGCAGTTTCATAGGATGAATGTCTAAAAGAATAATGGTGAGCGATAAGAAAACGACTGAATAACTGCACATTTTCGCTCGAAAGCTTCCTGTCAGATc > 2:3427334/1‑149 (MQ=255) aaTTATTGAACCCTTCTCTACGCAACTTCAGTTCCCACCACCAACTTTGCGGCAGTTTCATAGGATGAATTTCTAAAAGAATAATGGTGAGCGATAAGAAAACGACTGAATAACTGCACATTTTCGCTCGAAAGCTTCCTGTCAGATcc < 2:3954443/149‑1 (MQ=255) ttattGAACCCTTCTCTACGCAACTTCAGTTCCCACCACCAACTTTGCGGCAGTTTCATAGGATTATTGTATAAAATAATAATGGTGAGCGATAAGAAAACGACTGAATAACTGCACATTTTCGCTCGAAAGCTTCCTGTCAGATCCAt < 1:3123671/149‑1 (MQ=255) attGAACCCTTCTCTACGCAACTTCAGTTCCCACCAAAAACTTTGCGGCTGTTTCATAGTATGAATTTCTAAAATAATAATGGTTAGCTATAATAAAACGACTGAATAACTGCACATTTTCGCTCGAAAGCTTCCTGTCAGATCCATAg < 1:200857/149‑1 (MQ=255) ttGAACCCTTCTCTACGCAACTTCAGTTCCCACCACCAACTTTGCGGCAGTTTCATAGGATGAATGTCTAAAAGAATACTGGTGAGCGATAAGAAAACGACTGAATAACTGCACATTTTCGCTCGAAAGCTTCCTGTCAGATCCATAGc > 2:647739/1‑149 (MQ=255) ttGAACCCTTCTCTACGCAACTTCAGTTCCCACCACCAACTTTGCGGCAGTTTCATAGGATGAATGTCTAAAAGAATAATGGTGAGCGATAAGAAAACGACTGAATAACTGCACATTTTCGCTCGAAAGCTTCCTGTCAGATCCATAGc > 1:1630043/1‑149 (MQ=255) ttGAACCCTTCTCTACGCAACTTCAGTTCCCACCACCAACTTTGCGGCAGTTTCATAGGATGAATGTCTAAAAGAATAATGGTGAGCGATAAGAAAACGACTGAATAACTGCACATTTTCGCTCGAAAGCTTCCTGTCAGATCCATAGc > 1:1778366/1‑149 (MQ=255) aaCCCTTCTCTACGCAACTTCAGTTCCCACCACCAACTTTGCGGCAGTTTCATAGGATGAATGTCTAAAAGAATAATGGTGAGCGATAAGAAAACGACTGAATAACTGCACATTTTCGCTCGAAAGCTTCCTGTCAGATCCATAGCGaa > 2:4381712/1‑149 (MQ=255) cccTTCTCTACGCAACTTCAGTTCCCACCACCAACTTTGCGGCAGTTTCATAGGATGAATGTCTAAAATAATAATGGTGAGCGATAAGAAAACGACTGAATAACTGCACATTTTCGCTCGAAAGCTTCCTGTCAGATCCATAGCGAATc < 2:2269777/149‑1 (MQ=255) cccTTCTCTACGCAACTTCAGTTCCCACCACCAACTTTGCGGCAGTTTCATAGGATGAATGTCTAAAAGAATAATGGTGAGCGATAAGAAAACGACTGAATAACTGCACATTTTCGCTCGAAAGCTTCCTGTCAGATCCATAGCGAATc > 1:3470780/1‑149 (MQ=255) cccTTCTCTACGCAACTTCAGTTCCCACCACCAACTTTGCGGCAGTTTCATAGGATGAATGTCTAAAAGAATAATGGTGAGCGATAAGAAAACGACTGAATAACTGCACATTTTCGCTCGAAAGCTTCCTGTCAGATCCATAGCGAATc > 1:3472550/1‑149 (MQ=255) cccTTCTCTACGCAACTTCAGTTCCCACCACCAACTTTGCGGCAGTTTCATAGGATGAATGTCTAAAAGAATAATGGTGAGCGATAAGAAAACGACTGAATAACTGCACATTTTCGCTCGAAAGCTTCCTGTCAGATCCATAGCGAATc > 2:3152726/1‑149 (MQ=255) cTTCTCTACGCAACTTCAGTTCCCACCACCAACTTTGCGGCAGTTTCATAGGATGAATGTCTAAAAGAATAATGGTGAGCGATAAGAAAACGACTGAATAACTGCACATTTTCGCTCGAAAGCTTCCTGTCAGATCCATAGCGAATCaa > 1:177598/1‑149 (MQ=255) ttCTCTACACAAATACAGTTCCCACCACAAAATTTGGGTCTTTTTATTAGTATTATTGTAAAAAATAAAAATGGTGAGCGATAATAAAACGACTGAATAACTGCACATTTTCGCTCGAAAGCTTCCTGTCAGATCCATAGCGAATCAAg < 1:3690284/149‑1 (MQ=255) ttCTATACGCAAATTCAGTTCCCACCACCAACTTTGCGGCTTTTTCATAGGATTATTGTATAAAATAATAATGGGGAGCGATAAGAAAACGACTGAATAACTGCACATTTTCGCTCGAAAGCTTCCTGTCAGATCCATAGCGAATCAAg < 1:3752134/149‑1 (MQ=255) tctcTACGCAACTTCAGTTCCCACCACCAACTTTGCGGCAGTTTCATAGGATGAATGTCTAAAAGAATAATGGTGAGCGATAAGAAAACGACTGAATAACTGCACATTTTCGCTCGAAAGCTTCCTGTCAGATCCATAGCGAATCAAGt > 2:4077607/1‑149 (MQ=255) tctACGCAACTTCAGTTCCCACCACCAACTTTGCGGCTGTTTCATAGGATTAATGTCTAAAAGAATAATGGTGAGCGATAAGAAAACGACTGAATAACTGCACATTTTCGCTCGAAAGCTTCCTGTCAGATCCATAGCGAATCAAGTGc < 1:4392048/149‑1 (MQ=255) ctACGCAACTTCAGTTCCCACCACCAACTTTGCGGCAGTTTCATAGGATGAATGTCTAAAAGAATAATGGTGAGCGATAAGAAAACGACTGAATAACTGCACATTTTCGCTCGAAAGCTTCCTGTCAGATCCATAGCGAATCAAGTGCt < 2:3979135/149‑1 (MQ=255) cGCAACTTCAGTTCCCACCACCAACTTTGCGGCAGTTTCATAGGATGAATGTCTAAAAGAATAATGGTGAGCGATAAGAAAACGACTGAATAACTGCACATTTTCGCTCGAAAGCTTCCTGTCAGATCCATAGCGAATCAAGTGCTGaa > 2:3249843/1‑149 (MQ=255) aaCTTCAGTTCCCACCACCAACTTTGCGGCATTTTCATAGGATTAATGTCTAAAAGAATAATGGTGAGCGATAAGAAAACGACTGAATAACTGCACATTTTCGCTCGAAAGCTTCCTGTCAGATCCATAGCGAATCAAGTGCTGAATGt < 2:2561509/149‑1 (MQ=255) aaCTTCAGTTCCCACCACCAACTTTGCGGCAGTTTCATAGGATGAATGTCTAAAAGAATAATGGTGAGCGATAAGAAAACGACTGAATAACTGCACATTTTCGCTCGAAAGCTTCCTGTCAGATCCATAGCGAATCAAGTGCTGAATGt > 1:798278/1‑149 (MQ=255) aaCTTCAGTTCCCACCACCAACTTTGCGGCAGTTTCATAGGATGAATGTCTAAAAGAATAATGGTGAGCGATAAGAAAACGACTGAATAACTGCACATTTTCGCTCGAAAGCTTCCTGTCAGATCCATAGCGAATCAAGTGCTGAATGt > 1:3299994/1‑149 (MQ=255) ccTTCTGTTCCCACCACCAACTTTGCGGCAGTTTCATAGGATGAATGTCTAAAAGAATAATGGTGAGCGATAAGAAAACGACTGAATAACTGCACATTTTCGCTCGAAAGCTTCCTGTCAGATCCATAGCGAATCAAGTGCTGAATGTc < 1:2070713/148‑1 (MQ=255) tCAGTTCCCACCACCAACTTGGCGTCTTTTTCATAGTATTAATGTCTAAAATAATATTTGTGTGCGATAAGAAAACGACTGAATAACTGCACATTTTCGCTCGAAAGCTTCCTGTCAGATCCATAGCGAATCAAGTGCTGAATGTcaca < 1:1723099/149‑1 (MQ=255) aGTTCCCACCACCAACTTTGCGGCTGTTTCATAGGATGAATGTCTAAAAGAATAATGGTGAGCGATAAGAAAACGACTGAATAACTGCACATTTTCGCTCGAAAGCTTCCTGTCAGATCCATAGCGAATCAAGTGCTGAATGTCACAGt < 1:278171/149‑1 (MQ=255) gTTCCCACCACCAACTTTGCGGCAGTTTCATAGTATTAATTTCTAAAATAATAATGGTGAGCTATAACAAAACGACTGAATAACTGCACATTTTCGCTCGAAAGCTTCCTGTCAGATCCATAGCGAATCAAGTGCTGAATGTCACAGTa < 1:812315/149‑1 (MQ=255) gTTCCCACCACCAACTTTGCGGCAGTTTCATAGGATGAATGTCTAAAAGAATAATGGTGAGCGATAAGAAAACGACTGAATAACTGCACATTTTCGCTCGAAAGCTTCCTGTCAGATCCATAGCGAATCAAGTGCTGAATGTCACAGTa > 1:4236594/1‑149 (MQ=255) gTTCCCACCACCAACTTTGCGGCAGTTTCATAGGATGAATGTCTAAAAGAATAATGGTGAGCGATAAGAAAACGACTGAATAACTGCACATTTTCGCTCGAAAGCTTCCTGTCAGATCCATAGCGAATCAAGTGCTGAATGTCACAGTa > 1:3071785/1‑149 (MQ=255) gTTCCCACCACCAACTTTGCGGCAGTTTCATAGGATGAATGTCTAAAAGAATAATGGTGAGCGATAAGAAAACGACTGAATAACTGCACATTTTCGCTCGAAAGCTTCCTGTCAGATCCATAGCGAATCAAGTGCTGAATGTCACAGTa > 2:4354948/1‑149 (MQ=255) cccACCACCAACTTTGCGGCAGTTTCATAGGATGAATGTCTAAAAGAATAATGGTGAGCGATAAGAAAACGACTGAATAACTGCACATTTTCGCTCGAAAGCTTCCTGTCAGATCCATAGCGAATCAAGTGCTGAATGTCACAGTATCg < 2:2756459/149‑1 (MQ=255) cccACCACCAACTTTGCGGCAGTTTCATAGGATGAATGTCTAAAAGAATAATGGTGAGCGATAAGAAAACGACTGAATAACTGCACATTTTCGCTCGAAAGCTTCCTGTCAGATCCATAGCGAATCAAGTGCTGAATGTCACAGTATCg > 1:1685170/1‑149 (MQ=255) caccaccaACTTTGCGGCAGTTTCATAGGATGAATGTCTAAAAGAATAATGGTGAGCGATAAGAAAACGACTGAATAACTGCACATTTTCGCTCGAAAGCTTCCTGTCAGATCCATAGCGAATCAAGTGCTGAATGTCACAGTATCGaa > 2:2051870/1‑149 (MQ=255) ccaccaACTTTGCGGCAGTTTCATAGGATGAATGTCTAAAATAATAATGGTGAGCGATAAGAAAACGACTGAATAACTGCACATTTTCGCTCGAAAGCTTCCTGTCAGATCCATAGCGAATCAAGTGCTGAATGTCACAGTATCGAACa < 1:965992/149‑1 (MQ=255) caACTTTGCGGCAGTTTCATAGGATGAATGTCTAAAAGAATAATGGTGAGCGATAAGAAAACGACTGAATAACTGCACATTTTCGCTCGAAAGCTTCCTGTCAGATCCATAGCGAATCAAGTGCTGAATGTCACAGTATCGAACAGaaa > 2:1601773/1‑149 (MQ=255) cTTTGCGGCAGTTTCATAGGATGAATGTCTAAAAGAATAATGGTGAGCGATAAGAAAACGACTGAATAACTGCACATTTTCGCTCGAAAGCTTCCTGTCAGATCCATAGCGAATCAAGTGCTGAATGTCACAGTATCGAACAGAAAACa > 2:1936540/1‑149 (MQ=255) cTTTGCGGAAGTTTAATAGTATGAATGTCTAAAATAATATTGGTGAGCGATAAGAAAACGACTGAATAACTGCACATTTTCGCTCGAAAGCTTCCTGTCAGATCCATAGCGAATCAAGTGCTGAATGTCACAGTATCGAACAGAAAACa < 1:1643055/149‑1 (MQ=255) gCGGCATTTTAATTGGTTGAATGTCTAAAATAATAAGGGTGAGCTATAAGAAAACGACTGAATAACTGCACATTTTCGCTCGAAAGCTTCCTGTCAGATCCATAGCGAATCAAGTGCTGAATGTCACAGTATCGAACAGAAAACAGTGa < 1:1102385/149‑1 (MQ=255) gCGGCATTTTAATAGGATGAATGTCTAAAAGAATAATGGTGAGCGATAAGAAAACGACTGAATAACTGCACATTTTCGCTCGAAAGCTTCCTGTCAGATCCATAGCGAATCAAGTGCTGAATGTCACAGTATCGAACAGAAAACAGTGa < 1:3139776/149‑1 (MQ=255) cGGCAGTTTCATAGGATGAATGTCTAAAAGAATAATGGTGAGCGATAAGAAAACGACTGAATAACTGCACATTTTCGCTCGAAAGCTTCCTGTCAGATCCATAGCGAATCAAGTGCTGAATGTCACAGTATCGAACAGAAAACAGTGAc < 2:1689475/149‑1 (MQ=255) gCAGTTTCATAGGATGAATGTCTAAAAGAATAATGGTGAGCGATAAGAAAACGACTGAATAACTGCACATTTTCGCTCGAAAGCTTCCTGTCAGATCCATAGCGAATCAAGTGCTGAATGTCACAGTATCGAACAGAAAACAGTGACGa > 1:18022/1‑149 (MQ=255) cattttCATAGGATGAATGTCTAAAAGAATAATGGTGAGCGATAAGAAAACGACTGAATAACTGCACATTTTCGCTCGAAAGCTTCCTGTCAGATCCATAGCGAATCAAGTGCTGAATGTCACAGTATCGAACAGAAAACAGTGACGAt < 2:4001582/146‑1 (MQ=255) gTTTCATCGGTTTAATGTCTAAAATATTATGGGTGAGCGATACGAAAACGACTGAATAACTGCACATTTTCGCTCGAAAGCTTCCTGTCAGATCCATAGCGAATCAAGTGCTGAATGTCACAGTATCGAACAGAAAACAGTGACGATCt < 1:3414041/149‑1 (MQ=255) gTTTCATAGTATTAATGTCTAAAAGAATAATGTTGAGCGATAAGAAAACGACTGAATAACTGCACATTTTCGCTCGAAAGCTTCCTGTCAGATCCATAGCGAATCAAGTGCTGAATGTCACAGTATCGAACAGAAAACAGTGACGATCt < 2:3050798/149‑1 (MQ=255) gTTTCATAGGATGAATGTCTAAAAGAATAATGGTGAGCGATAAGAAAACGACTGAATAACTGCACATTTTCGCTCGAAAGCTTCCTGTCAGATCCATAGCGAATCAAGTGCTGAATGTCACAGTATCGAACAGAAAACAGTGACGATCt > 1:3422945/1‑149 (MQ=255) tttCATAGGATGAATGTCTAAAAGAATAATGGTGAGCGATAAGAAAACGACTGAATAACTGCACATTTTCGCTCGAAAGCTTCCTGTCAGATCCATAGCGAATCAAGTGCTGAATGTCACAGTATCGAACAGAAAACAGTGACGATCTa > 2:2148813/1‑149 (MQ=255) aGGATGAATGTCTAAAAGAATAATGGTGAGCGATAAGAAAACGACTGAATAACTGCACATTTTCGCTCGAAAGCTTCCTGTCAGATCCATAGCGAATCAAGTGCTGAATGTCACAGTATCGAACAGAAAACAGTGACGATCTAACCCtt > 2:512576/1‑149 (MQ=255) ggATGAATGTCTAAAAGAATAATGGTGAGCGATAAGAAAACGACTGAATAACTGCACATTTTCGCTCGAAAGCTTCCTGTCAGATCCATAGCGAATCAAGTGCTGAATGTCACAGTATCGAACAGAAAACAGTGACGATCTAACCCTTc > 1:4415543/1‑149 (MQ=255) gATGAATGTCTAAAAGAATAATGGTGAGCGATAAGAAAACGACTGAATAACTGCACATTTTCGCTCGAAAGCTTCCTGTCAGATCCATAGCGAATCAAGTGCTGAATGTCACAGTATCGAACAGAAAACAGTGACGATCTAACCCTTCa < 1:4050169/149‑1 (MQ=255) aTGAATGTCTAAAAGAATAATGGTGAGCGATAAGAAAACGACTGAATAACTGCACATTTTCGCTCGAAAGCTTCCTGTCAGATCCATAGCGAATCAAGTGCTGAATGTCACAGTATCGAACAGAAAACAGTGACGATCTAACCCTTCaa < 2:3418150/149‑1 (MQ=255) tGAATGTCTAAAAGAATAATGGTGAGCGATAAGAAAACGACTGAATAACTGCACATTTTCGCTCGAAAGCTTCCTGTCAGATCCATAGCGAATCAAGTGCTGAATGTCACAGTATCGAACAGAAAACAGTGACGATCTAACCCTTCAAg > 2:509623/1‑149 (MQ=255) tGAATGTCTAAAAGAATAATGGTGAGCGATAAGAAAACGACTGAATAACTGCACATTTTCGCTCGAAAGCTTCCTGTCAGATCCATAGCGAATCAAGTGCTGAATGTCACAGTATCGAACAGAAAACAGTGACGATCTAACCCTTCAAg > 2:1371857/1‑149 (MQ=255) tGAATGTCTAAAAGAATAATGGTGAGCGATAAGAAAACGACTGAATAACTGCACATTTTCGCTCGAAAGCTTCCTGTCAGATCCATAGCGAATCAAGTGCTGAATGTCACAGTATCGAACAGAAAACAGTGACGATCTAACCCTTCAAg > 2:1323209/1‑149 (MQ=255) gAATGTCTAAAAGAATAATGGTGAGCGATAAGAAAACGACTGAATAACTGCACATTTTCGCTCGAAAGCTTCCTGTCAGATCCATAGCGAATCAAGTGCTGAATGTCACAGTATCGAACAGAAAACAGTGACGATCTAACCCTTCAAGa < 2:1024646/149‑1 (MQ=255) aatttatAAAAGAATAATGGTGAGCGATAATAAAACGACTGAATAACTGCACATTTTCGCTCGAAAGCTTCCTGTCAGATCCATAGCGAATCAAGTGCTGAATGTCACAGTATCGAACAGAAAACAGTGACGATCTAACCCTTCAAGaa < 2:3704673/143‑1 (MQ=255) aTGTATAAAAGAATAATGGTGAGCTATAAGAAAACGACTGAATAACTGCACATTTTCGCTCGAAAGCTTCCTGTCAGATCCATAGCGAATCAAGTGCTGAATGTCACAGTATCGAACAGAAAACAGTGACGATCTAACCCTTCAAGAat < 2:1976996/149‑1 (MQ=255) tGTCTAAAAGAATAATGGTGAGCGATAAGAAAACGACTGAATAACTGCACATTTTCGCTCGAAAGCTTCCTGTCAGATCCATAGCGAATCAAGTGCTGAATGTCACAGTATCGAACAGAAAACAGTGACGATCTAACCCTTCAAGAata > 2:2195841/1‑149 (MQ=255) cTAAAAGAATAATGGTGAGCGATAAGAAAACGACTGAATAACTGCACATTTTCGCTCGAAAGCTTCCTGTCAGATCCATAGCGAATCAAGTGCTGAATGTCACAGTATCGAACAGAAAACAGTGACGATCTAACCCTTCAAGAATATTc < 2:1336666/149‑1 (MQ=255) tAAAAGAATAATGGTGAGCGATAAGAAAACGACTGAATAACTGCACATTTTCGCTCGAAAGCTTCCTGTCAGATCCATAGCGAATCAAGTGCTGAATGTCACAGTATCGAACAGAAAACAGTGACGATCTAACCCTTCAAGAATATTCt > 2:14208/1‑149 (MQ=255) aaGAATAATGGTGAGCGATAAGAAAACGACTGAATAACTGCACATTTTCGCTCGAAAGCTTCCTGTCAGATCCATAGCGAATCAAGTGCTGAATGTCACAGTATCGAACAGAAAACAGTGACGATCTAACCCTTCAAGAATATTCTACg > 1:1627238/1‑149 (MQ=255) gAATAATGGTGAGCGATAAGAAAACGACTGAATAACTGCACATTTTCGCTCGAAAGCTTCCTGTCAGATCCATAGCGAATCAAGTGCTGAATGTCACAGTATCGAACAGAAAACAGTGACGATCTAACCCTTCAAGAATATTCTACGAt < 1:1070970/149‑1 (MQ=255) | AACAACTCTTGGAAATTATGGACTTTGTCCCGCGGCTTTAATCTGACGGCCGCGTTCCTTTTTTGACTCAATTATTGAACCCTTCTCTACGCAACTTCAGTTCCCACCACCAACTTTGCGGCAGTTTCATAGGATGAATGTCTAAAAGAATAATGGTGAGCGATAAGAAAACGACTGAATAACTGCACATTTTCGCTCGAAAGCTTCCTGTCAGATCCATAGCGAATCAAGTGCTGAATGTCACAGTATCGAACAGAAAACAGTGACGATCTAACCCTTCAAGAATATTCTACGAT > CP009273/2036599‑2036894 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |