| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,170,713 | C→A | 25.5% | intergenic (‑30/+278) | gatY ← / ← fbaB | D‑tagatose 1,6‑bisphosphate aldolase 2, catalytic subunit/fructose‑bisphosphate aldolase class I |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,170,713 | 0 | C | A | 25.5% | 286.8 / 27.3 | 164 | intergenic (‑30/+278) | gatY/fbaB | D‑tagatose 1,6‑bisphosphate aldolase 2, catalytic subunit/fructose‑bisphosphate aldolase class I |
| Reads supporting (aligned to +/- strand): ref base C (27/78); new base A (33/11); total (75/89) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.81e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 170 total aligned reads displayed.
TTGGCAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AATGAAATTATTTGTTTTTAAATATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGT‑GAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCG > CP009273/2170565‑2170861 | ttGGCAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTc < 2:3136857/149‑1 (MQ=255) cAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCaaaa < 1:3814247/149‑1 (MQ=255) cAGCGGTTTCTACCACCACTTGCATCGTTCCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCaaaa < 2:2624963/149‑1 (MQ=255) gCGGTTTCTACCACCACTTGCATCGTTTCGGGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTCAAAata > 2:3918291/1‑149 (MQ=255) gCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTATATTTAAAAata > 2:150929/1‑149 (MQ=255) gCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTTTTTTAGATTTAaaaaaa > 2:1264095/1‑147 (MQ=255) gCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTTTTTTAGATTTAAAAata > 2:151059/1‑149 (MQ=255) tttCTACCACCACTTTCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCATCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AAt < 2:1915855/149‑1 (MQ=255) tttCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AAt < 2:1917281/149‑1 (MQ=255) ttCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AATg < 2:1365078/149‑1 (MQ=255) tcgaccaccACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AATGa < 1:2721691/146‑1 (MQ=255) cTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AATGaa < 1:3624646/149‑1 (MQ=255) tACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AATGaaa < 2:2642790/149‑1 (MQ=255) accaccACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AATGAAat < 2:1840715/149‑1 (MQ=255) ccaccaCTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTCAAAAAAT‑AAATAAatt > 2:840047/1‑149 (MQ=255) accacTTGCATCGTATCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AATGAAattat < 2:4027281/149‑1 (MQ=255) ccacTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTGGATTTAAAAATAT‑aattaaattaat > 1:3812195/1‑147 (MQ=255) ccacTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AATGAAattatt < 2:2184914/149‑1 (MQ=255) ccacTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AATGAAattatt < 2:1111951/149‑1 (MQ=255) cacTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AATGAAATTAttt < 1:52481/149‑1 (MQ=255) cacTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AATGAAATTAttt < 1:2777416/149‑1 (MQ=255) cacTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AATGAAATTAttt < 1:2777409/149‑1 (MQ=255) cacTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AATGAAATTAttt < 2:2496962/149‑1 (MQ=255) cacTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AATGAAATTAttt < 1:861271/149‑1 (MQ=255) cTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTAAAAATAA‑AAATAAATTAttttt > 2:3729134/1‑147 (MQ=255) ttGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTAGATTTAAAAAAAT‑AATGAAAATAtttttt > 2:2266464/1‑149 (MQ=255) ttGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AATGAAATTATTTGtt < 2:904053/149‑1 (MQ=255) cATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTAGATTTAAAAATAT‑AAATAAATTATtttttttt > 2:4233110/1‑149 (MQ=255) aTCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AATGAAATTATTTGTTTTTa < 1:3632154/149‑1 (MQ=255) aTCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AATGAAATTATTTGTTTTTa < 1:3631334/149‑1 (MQ=255) aTCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AATGAAATTATTTGTTTTTa < 2:304314/149‑1 (MQ=255) tCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAAAAT‑AATGAAATTATttttttttta > 2:1757782/1‑147 (MQ=255) tCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGAATTAAAAAAAT‑AAATAAAATATTTTTTTTTaa > 1:1321112/1‑149 (MQ=255) tCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGATTTAAAAAAAT‑AAATAAATTATTTTTTTTTaa > 1:2771344/1‑149 (MQ=255) gTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTAAAAAAAT‑AATTAAAATATTTTTTTTTAAat > 2:4207351/1‑149 (MQ=255) tttCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AATGAAATTATTTGTTTTTAAata < 1:3311312/149‑1 (MQ=255) tttCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AATGAAATTATTTGTTTTTAAata < 2:2472401/149‑1 (MQ=255) tttCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AATGAAATTATTTGTTTTTAAata < 1:995618/149‑1 (MQ=255) tttCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTTTTTTTGATTTAAAAAAAA‑AATTAAAATATtttttttttattt > 1:1154199/1‑144 (MQ=255) ttCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AATGAAATTATTTGTTTTTAAatat < 2:4315258/149‑1 (MQ=255) tCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AATGAAATTATTTGTTTTTAAATATc < 1:2381786/149‑1 (MQ=255) tCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AATGAAATTATTTGTTTTTAAATATc < 1:4374107/149‑1 (MQ=255) gagaTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTTGATTTAAAAAAAA‑AATGAAATTATTTTTTTTTAAaaatata > 1:2129074/1‑146 (MQ=255) agaTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AATGAAATTATTTGTTTTTAAATATCgag < 1:2742318/149‑1 (MQ=255) agaTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTCGATTTAAAAAAAA‑AAATAAAATATTTTTTTTTAAATATAgaa > 1:651819/1‑148 (MQ=255) agaTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGATTTAAAAAAAA‑AAATAAATTATTTGTTTTTAAATATagag > 2:1340175/1‑149 (MQ=255) agaTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACAGTTTCATATCCTGTCGTGTGTTTTAGTTTTAAAAAAAT‑AATGAAATTATTTTTTTTTAAATATagag > 1:651762/1‑149 (MQ=255) aTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AATGAAATTATTTGTTTTTAAATATCGAGAt < 1:3827191/149‑1 (MQ=255) gAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AATGAAATTATTTGTTTTTAAATATCGAGATAACGa < 1:1701450/149‑1 (MQ=255) gAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTTGTTTTGAAAATAT‑AATTAAATTATTTTTTTTTTAATATAGAGATAACGa > 1:3126775/1‑149 (MQ=255) aaTATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AATGAAATTATTTGTTTTTAAATATCGAGATAACGAt < 2:3772621/149‑1 (MQ=255) atatTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTAAAAATAT‑AATGAAATTATTTGTTTTTAAATATAGAGATAACGAta > 2:1070252/1‑148 (MQ=255) atatTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTCAAAATAT‑AATGAAATTATTTGTTTTTAAATATCGAGATAACGATc > 2:1070345/1‑149 (MQ=255) aaTGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGGTTTAGATTTCAAAATAA‑AATGTAATTAATTTTTTTTTAATATAGAGCTAACGATCAC‑aaaa > 2:3387555/1‑149 (MQ=255) aTGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AATGAAATTATTTGTTTTTAAATATCGAGATAACGATCAC‑aaaaa < 2:4416615/149‑1 (MQ=255) ccGTAACCTCATAACCGCCGCGCTGTGCGTTGTTCAGAATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCTATTTAAAAATAT‑AATGAAATTATTTGTTTTTAAATATCGAGATAACGATCAC‑AAAAACGa < 1:1624100/149‑1 (MQ=255) cgtaaCCGAATAACCGCCGCGGGGTGCGTTTTTCAGAATCTGCTTTGTCGATACCACGTAATTTTTAATATCCTGTCGTTTGTTTTCTTTTTAAAAATAT‑AATTAATTTTTTTTTTTTTAAATATCGAGATAACGATCAC‑AAACACGAc < 1:4195801/146‑1 (MQ=255) cGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACTTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AATGAAATTATTTGTTTTTAAATATCGAGATAACGATCAC‑AAAAACGAc < 2:1303781/149‑1 (MQ=255) gAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGGGTGTTAGATTTGAAAATAT‑AATGTAATTATTTTTTTTTTAATATGGTGATAACGTTGAC‑AAAAACGACaa > 1:3479040/1‑149 (MQ=255) gAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGGGGTTTGGGGTTAAAAAAAA‑AATTTAATTATTTTTTTTTTAATTACGTGAGAACCAAAAC‑CAAAAcaacaa > 1:2738855/1‑149 (MQ=255) ccgccgCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTCAAAATAT‑AATGAAAATATTTTTTTTTAAATATAGAGATAAAGATAAC‑AAAAACGAAAATATGAAAatta > 2:703309/1‑149 (MQ=255) ccgcGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGGGTTTTTGTTTTGAAAAAATAAATAAAATAATTTTTTTTTAAA‑ATATAGATAAATATAAA‑AAAAAAAAAAAAAAGAAAaatatta > 1:3923725/1‑148 (MQ=255) gcTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGAGTTCAAAATAT‑TATTAAATTATTTGTTTTTAAATATCGAGATAACGATCAC‑CAAAACGACAAAATGAAAATTATTCgatg > 2:4314236/1‑147 (MQ=255) gtgCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTCCAAATAT‑AATGAAATTATTTGTTTTTAAAAATAGAGAAAACCAACAC‑AAAAAAGACAAAATGTAAATTTTTCgcggagg > 2:2912940/1‑148 (MQ=255) ctgcttCTGTTTTGTCTATACCACTTAAATTTTAATATCCTGTGTTTTTTTTTCTATTTAAAAATAT‑ATTTAAATTATTTGTTTTTAAATATCGATATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGT‑GAAAGGCaaa < 1:2509058/144‑1 (MQ=255) cATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGGTTTGGTTTTGAAAAAAT‑AAATCAAATATTTTTTTTTTAATATATAGATAAACAAAAA‑AAAAAAGAAAAAAAAAAAAATAATAGAGGAGT‑GAAACGCaaaaaa > 2:3327670/1‑149 (MQ=255) atcttttttGTCGATACCAATTAATTTTTCATATCCTGTGTTTTTTTTTCTATTAAAAAATAT‑AATTAAATTTTTTTTTTTTAAATATCGATATAACTAACAC‑AAAAACGACAATATGAAAATTATTCGAGGAGT‑GAAAGGCaaaaaaa < 1:1135069/143‑1 (MQ=255) aTCTGTTTTGTCGACACCACTTAATTTTTCATCTCCTGTTTTTTGTTTTATTTTACAAAATAT‑AATTATATTTTTTTTTTTTAAATATCTATTAAACGAACAC‑AAACACGACAATATGAAAATTATTCGAGGAGT‑GAAAGGCaaaaaaa < 1:3361913/149‑1 (MQ=255) tCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTAGATTTCAAAATAT‑AATGAAATTATTTTTTTTTAAATATAGAGGTAAAGATCAC‑AAAAAAGACAATATTAAAATTATTAGAGGAGT‑GAAAGGCCTAAAAAc > 2:3251891/1‑149 (MQ=255) tCTGCTTTGTCGATACCACGTACATTTTCATAGCCTGTCTTTTGTTTTCGATTTCAAAATAT‑AATGAAATTATTTTTTTTTAAATATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGT‑GAAAGGCAAAAAAAc < 2:3556408/149‑1 (MQ=255) tttGTCGATACCACGTACATTTTCATATCCTGTCGTGTTTTTTCGATTTGAAAATAT‑AAATTAATTATTTTTTTTTTAATATCGAGATAAAGGTAAA‑CAAAACGAAAAAATTTAAAATATTTGAGGTGG‑GGAAGGCAAAAAAAAGGcca > 2:1557034/1‑148 (MQ=255) tttGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGTATTAAAAATAT‑AAATAAAATATTTTTTTTTATATATAGATATAAACAAAAA‑AAAAAAAAAAAAATTAAAAATAATAGTGGAGT‑GTAATGCaaaaaaaatgcca > 2:776357/1‑143 (MQ=255) tttGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGATTTTAAAATAA‑AATTAAATTTTTTTTTTTTTTATATAGAGATAACGATCACAAAAAAAGAAAAAAT‑AAAAATATTAGAGGAGTGGAAGGGCAAAAAAACgcca > 2:776183/1‑146 (MQ=255) ttGTCGATACCACGTACATTTTCATATCCTGTCTTTTGTTTTCTATTTCAAAATAT‑AATTAAATTATTTGTTTTTAAATATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGT‑GAAAGGCAAAAAAACGGCCTc < 2:1376121/149‑1 (MQ=255) gTCTATACCACGTACATTTTCATATCCTGTCTTTTGTTTTCGATTTCAAAATAT‑AATTAAATTATTTTTTTTTAAATATCTAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGT‑GAAAGGCAAAAAAACGGCCTccc < 2:651762/149‑1 (MQ=255) gTCGATACCACTTAAATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑ATTGAAATTATTTGTTTTTAAATATCGAGATACCGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGT‑GAAAGGCAAAAAAACGGCCTccc < 2:651819/149‑1 (MQ=255) cGATACCACGTACATTTTCATATCCTGTCGTGTGGTTTGGGTTTGAAAATAT‑AATGTAAATATTTTTTTTTAAATATAGAGATAAAGATCAC‑AAAAAACAAAAAATTAAAATTATTAGGGGAGT‑GAAAGGCCAAAAAACGGCCTACCGa > 2:2689468/1‑149 (MQ=255) gATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AATGAAATTATTTTTTTTTAAATATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGT‑GAAAGGCAAAAAAACGGCCTCCCGAt < 2:3254494/149‑1 (MQ=255) tACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTAAAAATAT‑AATGAAATTATTTTTTTTTAAATATCGAGATAACCATAAC‑AAAAACGACAAAATGAAAATTATTCTAGGAGT‑GAAAGGCAAAAAAAAGGCCTCCCGagag > 2:2030462/1‑149 (MQ=255) tACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTAAAAATAT‑AATGAAATTATTTTTTTTTAAAAATAGAGATAAACATCAC‑AAAAAAGACAAAATTAAAATTATTCGAGGCGT‑GTAAGGCAAAAAAACGGCCTCCCCATAg > 2:4021648/1‑149 (MQ=255) tACCACGTACATTTTCATATCCTGTCGTGTGTTTTGGATTTAAAAAAAT‑AAATAAATTATTTTTTTTTTAATATCGTGCTAAAGATAAC‑AAAAACCACAAAATGAAAATAATTAGAGGCGT‑GTAAGGCAATAAAAAAGCCAcccccgag > 2:1863939/1‑144 (MQ=255) tACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGATTTCAAAATAT‑AATGAAAATATTTTTTTTTAAATATAGAGATAACGATAAC‑AAAAAAGACAAAATTAAAATTATTCTAGGCGT‑GTAAGGCAAAAAAAAGGCCTCCCGagag > 2:3849375/1‑149 (MQ=255) ccACGTACATTTTCATATCCTGTCGTGTTTTTTAGTTTTGAAAATAT‑AATGAAATTATTTTTTTTTTAATATCGAGATTAAGATAAC‑AAAAAAGCCCAAATGAAACTTATTGGAGGGGT‑GGGAGGCACCAAAAAGGCCAcccccggggg > 2:3839303/1‑142 (MQ=255) aCGTACATTTTCATATCCTGTCGTGTGTTTTCGGTTTGAAAATAT‑AATGAAATTATTTTTTTTTTAATATAGAGATAAAGATCAC‑AAAAAAGACAAAATTGAAATTATTAGAGGGGT‑GAAAGGCCCAAATAAGGCCACCCCAGAGGGaa > 2:2882500/1‑149 (MQ=255) aCGTACATTTTCATATCCTGTCGTGTGTTTTCGATTTCAAAAAAT‑AATGTAAATATTTTTTTTTAAAAATAGAGATAAAGATAAC‑AAAAAAGACAAAAATAAAATTATTAGAGGAGT‑GAAAGGCAAAAAAAAGGCCGCCCCAGAGGGaa > 2:680852/1‑149 (MQ=255) cgtaatttttCATCTCCTGTGTTTTGTTTTCGATTTCAAAATAT‑AATTAATTTTTTTTTTTTTAATTATCGATATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGT‑GAAAGGCAAAAAAACGGCCTCCCGATAGGGAAg < 1:1788648/143‑1 (MQ=255) cGTACATTTTCATAGCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AATGAAATTATTTGTTTTTAAATATCGAGATACCGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGT‑GAAAGGCAAAAAAACGGCCTCCCGATAGGGAAg < 1:1789062/149‑1 (MQ=255) ttaatttttCATATCCTGTCTTTTTTTTTCTTTTTCAAAATAT‑ATTTAATTTTTTTTTTTTTAAATATCGATATAACGATCAA‑AAAAACGACAATATGAAAATTATTCGAGGAGT‑GAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGc < 1:1763180/144‑1 (MQ=255) gttctttttAATATCGTTTCGTTTTTTTTAGATTAAAAAATAA‑AATTAAATTATTTTTTTTTAAATATCTTGATAACTATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGT‑GAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGc < 2:1639348/144‑1 (MQ=255) gTACATTTTCATATCCTGTCGTTTTTTTTCTATTTCAAAATAT‑AATGAAATTATTTGTTTTTAAATATCGAGATAACTATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGT‑GAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGc < 2:723514/149‑1 (MQ=255) tACATTTTCATATCCTGTCGTTTGTTTTCTATTTCAAAATAT‑AATGAAATTATTTGTTTTTAAATATCTATATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGT‑GAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGcc < 2:1673293/149‑1 (MQ=255) tACATGTTCCTCCCCGGTCGTTTGTTTGCGATTTCAAAATCT‑ACTGACATTATTTGTTTTTAACTATCGAGATACCGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGT‑GAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGcc < 2:1673506/149‑1 (MQ=255) cATTTTCATATCCGGTCGTTTGTTTTCTATTACAAAATAT‑AATGAATTTATTTGTTTTTAAATATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGT‑GAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGt < 2:3550617/149‑1 (MQ=255) agccTGTCTTTTGTTTTCGATTTCAAAATAT‑AATTAAATTATTTGTTTTTAAATATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGT‑GAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTg < 2:1258490/147‑1 (MQ=255) gtttgtttTCGATTTCAAAATAT‑AATGAAATTATTTGTTTTTAAATATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGT‑GAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGtt > 2:313867/1‑149 (MQ=255) tttgtttTCGATTTCAAAATAT‑AATGAAATTATTTGTTTTTAAATATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGT‑GAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGttt > 2:3469958/1‑149 (MQ=255) aTTTCAAAATAT‑AATGAAATTATTTGTTTTTAAATATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGT‑GAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGa > 1:2445489/1‑149 (MQ=255) tCAAAATAT‑AATGAAATTATTTGTTTTTAAATATCGAGATACCGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGT‑GAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGc < 2:2790004/149‑1 (MQ=255) cAAAATAT‑AATGAAATTATTTGTTTTTAAATATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGT‑GAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCg > 1:4424526/1‑149 (MQ=255) cAAAATAT‑AATGAAATTATTTGTTTTTAAATATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGT‑GAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCg > 2:75019/1‑149 (MQ=255) | TTGGCAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AATGAAATTATTTGTTTTTAAATATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGT‑GAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCG > CP009273/2170565‑2170861 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |