| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,170,720 | T→A | 8.2% | intergenic (‑37/+271) | gatY ← / ← fbaB | D‑tagatose 1,6‑bisphosphate aldolase 2, catalytic subunit/fructose‑bisphosphate aldolase class I |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,170,720 | 0 | T | A | 8.2% | 497.2 / 2.1 | 163 | intergenic (‑37/+271) | gatY/fbaB | D‑tagatose 1,6‑bisphosphate aldolase 2, catalytic subunit/fructose‑bisphosphate aldolase class I |
| Reads supporting (aligned to +/- strand): ref base T (61/83); new base A (17/2); total (78/85) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.15e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 166 total aligned reads displayed.
TTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGT‑GAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTA > CP009273/2170575‑2170866 | tttCTACCACCACTTTCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCATCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAAt < 2:1915855/149‑1 (MQ=255)tttCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAAt < 2:1917281/149‑1 (MQ=255) ttCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATg < 2:1365078/149‑1 (MQ=255) tcgaccaccACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGa < 1:2721691/146‑1 (MQ=255) cTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGaa < 1:3624646/149‑1 (MQ=255) tACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGaaa < 2:2642790/149‑1 (MQ=255) accaccACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAat < 2:3970511/149‑1 (MQ=255) accaccACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAat < 2:1840715/149‑1 (MQ=255) ccaccaCTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTCAAAAAATAAATAAatt > 2:840047/1‑149 (MQ=255) caccacTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGTTTTCAAAATATaattaaatta > 2:1433196/1‑149 (MQ=255) accacTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAattat < 2:3445946/149‑1 (MQ=255) ccacTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTGGATTTAAAAATATaattaaattaat > 1:3812195/1‑147 (MQ=255) ccacTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAattatt < 2:1111951/149‑1 (MQ=255) ccacTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAattatt < 2:2185493/149‑1 (MQ=255) cacTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTAttt < 1:2777416/149‑1 (MQ=255) cacTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTAttt < 1:2777409/149‑1 (MQ=255) cacTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTAttt < 1:52481/149‑1 (MQ=255) cacTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTAttt < 1:861271/149‑1 (MQ=255) cacTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTAttt < 2:2496962/149‑1 (MQ=255) cTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTAAAAATAAAAATAAATTAttttt > 2:3729134/1‑147 (MQ=255) ttGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGtt < 2:904053/149‑1 (MQ=255) gtGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGtt < 2:3113150/148‑1 (MQ=255) gCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGtttt < 2:1288096/149‑1 (MQ=255) cATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTAGATTTAAAAATATAAATAAATTATtttttttt > 2:4233110/1‑149 (MQ=255) cATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGttttt < 1:3688081/149‑1 (MQ=255) aTCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTa < 1:3631334/149‑1 (MQ=255) tCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAAAATAATGAAATTATttttttttta > 2:1757782/1‑147 (MQ=255) tCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGAATTAAAAAAATAAATAAAATATTTTTTTTTaa > 1:1321112/1‑149 (MQ=255) tCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGATTTAAAAAAATAAATAAATTATTTTTTTTTaa > 1:2771344/1‑149 (MQ=255) gTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTCAAAAAATAATGAAATTATTTTTTTTTAAat > 2:4207362/1‑149 (MQ=255) gTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGGTTTAGATTTTAAAAAAAAAAAAAAATATTTTTTTTTtaaa > 1:1506671/1‑148 (MQ=255) tttCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAata < 1:3311981/149‑1 (MQ=255) tttCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAata < 1:3311312/149‑1 (MQ=255) tttCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAata < 1:995618/149‑1 (MQ=255) tttCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTTTTTTTGATTTAAAAAAAAAATTAAAATATtttttttttattt > 1:1154199/1‑144 (MQ=255) ttCGAGATAGAGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAatat < 2:2715123/149‑1 (MQ=255) tCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATc < 1:2381786/149‑1 (MQ=255) tCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATc < 1:4374107/149‑1 (MQ=255) gagaTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTTGATTTAAAAAAAAAATGAAATTATTTTTTTTTAAaaatata > 1:2129074/1‑146 (MQ=255) agaTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCgag < 1:2742318/149‑1 (MQ=255) agaTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACAGTTTCATATCCTGTCGTGTGTTTTAGTTTTAAAAAAATAATGAAATTATTTTTTTTTAAATATagag > 1:651762/1‑149 (MQ=255) ttGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTATATTTAAAAATAAAAATAAAATATTTTTTTTTTAATATAGAGATa > 2:28695/1‑149 (MQ=255) gAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGa < 1:1701450/149‑1 (MQ=255) gAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTTGTTTTGAAAATATAATTAAATTATTTTTTTTTTAATATAGAGATAACGa > 1:3126775/1‑149 (MQ=255) gAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGTTTTAAAAATATAATTAAATTTTTTTTTTTTTAATATAGAGGTTACGa > 1:694345/1‑149 (MQ=255) gAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGTTTTAAAAAAATAAATAAATTATTTTTTTTTTAATATAGAGTTaaaaa > 1:1782074/1‑146 (MQ=255) aaTATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGAt < 2:3772621/149‑1 (MQ=255) atatTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATTAAATTATTTTTTTTTAAATATAGAGATAACGATc > 2:1704330/1‑149 (MQ=255) atatTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATc > 2:1070345/1‑149 (MQ=255) atatTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTCGATTTCAAAATATAATGAAATTATTTTTTTTTTAATATAGAGATAAAGAta > 2:1070283/1‑148 (MQ=255) aaTGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGGTTTAGATTTCAAAATAAAATGTAATTAATTTTTTTTTAATATAGAGCTAACGATCAC‑aaaa > 2:3387555/1‑149 (MQ=255) aTGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCAC‑aaaaa < 2:4416615/149‑1 (MQ=255) aTGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTGGATTTAAAAATATAATGTAATTATTTTTTTTTTAATATAGAGATAAAGATCCC‑aaaaa > 2:3640011/1‑149 (MQ=255) cgtaaCCGAATAACCGCCGCGGGGTGCGTTTTTCAGAATCTGCTTTGTCGATACCACGTAATTTTTAATATCCTGTCGTTTGTTTTCTTTTTAAAAATATAATTAATTTTTTTTTTTTTAAATATCGAGATAACGATCAC‑AAACACGAc < 1:4195801/146‑1 (MQ=255) gAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTGGATTTCAAAAAAAAATTAAAATATTTTTTTTTTAATATTGAGATAAAGATAAC‑AAAAAAAACaa > 1:3481317/1‑149 (MQ=255) gAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGGGGTTTGGGGTTAAAAAAAAAATTTAATTATTTTTTTTTTAATTACGTGAGAACCAAAAC‑CAAAAcaacaa > 1:2738855/1‑149 (MQ=255) tAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTGGTCGATACCACGTACATTTTCATTTCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCAC‑AAAAACGACAATATGaaaa < 2:2917011/149‑1 (MQ=255) ccgccgCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTCAAAATATAATGAAAATATTTTTTTTTAAATATAGAGATAAAGATAAC‑AAAAACGAAAATATGAAAatta > 2:703309/1‑149 (MQ=255) gcgcTGTGCGTTGTTCAGCATCTGCTTTGTCGATCCCCCGTACTTTTTCCTATCCTGTCTTTTGTTTTCGATTTAAAAATATATTGAATTTATTTTTTTTTAAATATCTAGATAACTAACAC‑AAAAACGACAATATGAAAATTATTCga < 1:2055130/149‑1 (MQ=255) gcTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTGGTTTTCAAAATATAATGAAATTATTTTTTTTTTAATATCGTGATAACGATAAC‑AAAAACGACAAAAGTAAAAGTATTAgagg > 2:4314238/1‑149 (MQ=255) gtacAGCATAGGATTTGTCGACACCCCTAAATTTTTAATATCGGGTGGTTTGTTTTCTATTAAAAAATAAAATGAAATTTTTTGTTTTTAAATAGCGATATAACGAAAAA‑AAACACGACAATATGAAAATTATTCGAGGAGT‑GAAAGGc < 1:479899/146‑1 (MQ=255) ttCAGCTTCTGCTTTGTCTAAACCACTTAATTTTTCATATCCTTTCTTTTTTTTTCTATTAAAAATTATAATAAATTTTTTTTTTTTTAAATATCTATATACCTAAAAA‑AAACACGACAATATGAAAATTATTCGAGGAGT‑GAAAGGCa < 1:4185428/149‑1 (MQ=255) ctgcttCTGTTTTGTCTATACCACTTAAATTTTAATATCCTGTGTTTTTTTTTCTATTTAAAAATATATTTAAATTATTTGTTTTTAAATATCGATATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGT‑GAAAGGCaaa < 1:2509058/144‑1 (MQ=255) attgtgttttGTCTATCCCACTTACATTTTCATATCGTGTGTTTTTTTTTCTATTTAAAAATATAATGAATTTATTTTTTTTTAAATATCTATATAACTATCAA‑AAAAACGACAATATGAAAATTATTCGAGGAGT‑GAAAGGCaaaaaa < 1:3918291/142‑1 (MQ=255) atcttttttGTCGATACCAATTAATTTTTCATATCCTGTGTTTTTTTTTCTATTAAAAAATATAATTAAATTTTTTTTTTTTAAATATCGATATAACTAACAC‑AAAAACGACAATATGAAAATTATTCGAGGAGT‑GAAAGGCaaaaaaa < 1:1135069/143‑1 (MQ=255) tCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTAGATTTCAAAATATAATGAAATTATTTTTTTTTAAATATAGAGGTAAAGATCAC‑AAAAAAGACAATATTAAAATTATTAGAGGAGT‑GAAAGGCCTAAAAAc > 2:3251891/1‑149 (MQ=255) tCTGATTTGGCTATACCACTTAAATTTTCATATCCTTTCGTTTGTTTTCTATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGT‑GAAAGGCAAAAAAAc < 2:1330671/149‑1 (MQ=255) tttGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTAAAAAAATAATTAAAATATTTTTTTTTTAATATAGAGATAACGAAAAC‑AACAAAAAAAAAAAGAAAATTTTTGGTGGGGT‑GTAAGGCcaaaaaaactcct > 2:776366/1‑143 (MQ=255) tttGTCGATACCACGTACATTTTCATATCCTGTCGTGTTTTTTCGATTTGAAAATATAAATTAATTATTTTTTTTTTAATATCGAGATAAAGGTAAA‑CAAAACGAAAAAATTTAAAATATTTGAGGTGG‑GGAAGGCAAAAAAAAGGcca > 2:1557034/1‑148 (MQ=255) tttGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGATTTTAAAATAAAATTAAATTTTTTTTTTTTTTATATAGAGATAACGATCACAAAAAAAGAAAAAAT‑AAAAATATTAGAGGAGTGGAAGGGCAAAAAAACgcca > 2:776183/1‑146 (MQ=255) ttGTCGATACCACGAACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATTAAATTATTTTTTTTTAAATATCGCTATAACGATCAC‑AAACACGACAATATGAAAATTATTCGAGGAGT‑GAAAGGCAAAAAAACGGCCTc < 2:1374092/149‑1 (MQ=255) gTCTATACCACGTACATTTTCATATCCTGTCTTTTGTTTTCGATTTCAAAATATAATTAAATTATTTTTTTTTAAATATCTAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGT‑GAAAGGCAAAAAAACGGCCTccc < 2:651762/149‑1 (MQ=255) gATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATTAAATTATTTTTTTTTAAATATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGT‑GAAAGGCAAAAAAACGGCCTCCCGAt < 2:4415302/149‑1 (MQ=255) gATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTTTTTTTAAATATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGT‑GAAAGGCAAAAAAACGGCCTCCCGAt < 2:3254494/149‑1 (MQ=255) gATACCACGTAAATTTTCATATCCTGTCTTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGT‑GAAAGGCAAAAAAACGGCCTCCCGAt < 2:3254596/149‑1 (MQ=255) tACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTAAAAATATAATGAAATTATTTTTTTTTAAATATCGAGATAACCATAAC‑AAAAACGACAAAATGAAAATTATTCTAGGAGT‑GAAAGGCAAAAAAAAGGCCTCCCGagag > 2:2030462/1‑149 (MQ=255) tACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTAAAAATATAATGAAATTATTTTTTTTTAAAAATAGAGATAAACATCAC‑AAAAAAGACAAAATTAAAATTATTCGAGGCGT‑GTAAGGCAAAAAAACGGCCTCCCCATAg > 2:4021648/1‑149 (MQ=255) tACCACGTACATTTTCATATCCTGTCGTGTGTTTTGGATTTAAAAAAATAAATAAATTATTTTTTTTTTAATATCGTGCTAAAGATAAC‑AAAAACCACAAAATGAAAATAATTAGAGGCGT‑GTAAGGCAATAAAAAAGCCAcccccgag > 2:1863939/1‑144 (MQ=255) tACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGATTTCAAAATATAATGAAAATATTTTTTTTTAAATATAGAGATAACGATAAC‑AAAAAAGACAAAATTAAAATTATTCTAGGCGT‑GTAAGGCAAAAAAAAGGCCTCCCGagag > 2:3849375/1‑149 (MQ=255) ccACGTACATTTTCATATCCTGTCGTGTTTTTTAGTTTTGAAAATATAATGAAATTATTTTTTTTTTAATATCGAGATTAAGATAAC‑AAAAAAGCCCAAATGAAACTTATTGGAGGGGT‑GGGAGGCACCAAAAAGGCCAcccccggggg > 2:3839303/1‑142 (MQ=255) aCGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTGAAAATATAATGAAATTATTTTTTTTTTAATATAGAGATAAAGATCAC‑AAAAACGACAATATGTAAAATAATGGAGGTGT‑GTAAGGCAAAAAAAAGGCCTCCCCATTgggta > 2:680810/1‑147 (MQ=255) aCGTACATTTTCATATCCTGTCGTGTGTTTTCGGTTTGAAAATATAATGAAATTATTTTTTTTTTAATATAGAGATAAAGATCAC‑AAAAAAGACAAAATTGAAATTATTAGAGGGGT‑GAAAGGCCCAAATAAGGCCACCCCAGAGGGaa > 2:2882500/1‑149 (MQ=255) aCGTACATTTTCATATCCTGTCGTGTGTTTTCGATTTCAAAAAATAATGTAAATATTTTTTTTTAAAAATAGAGATAAAGATAAC‑AAAAAAGACAAAAATAAAATTATTAGAGGAGT‑GAAAGGCAAAAAAAAGGCCGCCCCAGAGGGaa > 2:680852/1‑149 (MQ=255) cGTACATTTTCATAGCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATACCGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGT‑GAAAGGCAAAAAAACGGCCTCCCGATAGGGAAg < 1:1789062/149‑1 (MQ=255) ttaatttttCATATCCTGTCTTTTTTTTTCTTTTTCAAAATATATTTAATTTTTTTTTTTTTAAATATCGATATAACGATCAA‑AAAAACGACAATATGAAAATTATTCGAGGAGT‑GAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGc < 1:1763180/144‑1 (MQ=255) gttctttttAATATCGTTTCGTTTTTTTTAGATTAAAAAATAAAATTAAATTATTTTTTTTTAAATATCTTGATAACTATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGT‑GAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGc < 2:1639348/144‑1 (MQ=255) gTACTTTTTCATCGCGTGTCGTTTGTTTTCGATTTCAAAATATACTGAAATTATTTGTTTTTAAATATCGAGATAACGATCAC‑AAACACGACAATATGAAAATTATTCGAGGAGT‑GAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGc < 2:2415618/149‑1 (MQ=255) tACATTTTCATATCCTGTCGTTTGTTTTCTATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCTATATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGT‑GAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGcc < 2:1673293/149‑1 (MQ=255) cATTTTCATATCCGGTCGTTTGTTTTCTATTACAAAATATAATGAATTTATTTGTTTTTAAATATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGT‑GAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGt < 2:3550617/149‑1 (MQ=255) cATATCCGGTGGTTTGTTTTCGATTTCAAAATATAATTAATTTATTTTTTTTTAATTATCGAGTTAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGT‑GAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCaaa < 2:2642042/149‑1 (MQ=255) agccTGTCTTTTGTTTTCGATTTCAAAATATAATTAAATTATTTGTTTTTAAATATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGT‑GAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTg < 2:1258490/147‑1 (MQ=255) gtttgtttTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGT‑GAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGtt > 2:313867/1‑149 (MQ=255) tttgtttTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGT‑GAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTCGCAAAGTGCGCGTGttt > 2:4196399/1‑149 (MQ=255) tttgtttTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGT‑GAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGttt > 2:3469958/1‑149 (MQ=255) aTTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGT‑GAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGa > 1:2445489/1‑149 (MQ=255) cAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGT‑GAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCg > 2:73074/1‑149 (MQ=255) cAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGT‑GAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCg > 2:75019/1‑149 (MQ=255) aaaaTATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGT‑GAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCgg > 2:3888781/1‑149 (MQ=255) atatAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGT‑GAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGgtgt > 1:3427982/1‑149 (MQ=255) atatAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGT‑GAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGgtgt > 2:2359320/1‑149 (MQ=255) | TTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGT‑GAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTA > CP009273/2170575‑2170866 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |