| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,170,757 | T→A | 11.4% | intergenic (‑74/+234) | gatY ← / ← fbaB | D‑tagatose 1,6‑bisphosphate aldolase 2, catalytic subunit/fructose‑bisphosphate aldolase class I |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,170,757 | 0 | T | A | 11.4% | 412.2 / 6.1 | 152 | intergenic (‑74/+234) | gatY/fbaB | D‑tagatose 1,6‑bisphosphate aldolase 2, catalytic subunit/fructose‑bisphosphate aldolase class I |
| Reads supporting (aligned to +/- strand): ref base T (71/61); new base A (6/14); total (77/75) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.67e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 157 total aligned reads displayed.
AATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGACGC > CP009273/2170609‑2170904 | aaTATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTCAAAATAT‑AATGAAATTATTTGTTTTTAAATATCGAGATAACGAt > 2:3241470/1‑149 (MQ=255) atatTGACTGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AATGAAATTATTTGTTTTTAAATATCGAGATAACGATc < 2:3894727/149‑1 (MQ=255) atatTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTAAAAATAT‑AATGAAATTATTTGTTTTTAAATATAGAGATAACGAta > 2:1070252/1‑148 (MQ=255) atatTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTCAAAATAT‑AATGAAATTATTTGTTTTTAAATATCGAGATAACGATc > 2:1070345/1‑149 (MQ=255) aaTGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGGTTTAGATTTCAAAATAA‑AATGTAATTAATTTTTTTTTAATATAGAGCTAACGATCACaaaa > 2:3387555/1‑149 (MQ=255) aTGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTGGATTTAAAAATAT‑AATGTAATTATTTTTTTTTTAATATAGAGATAAAGATCCCaaaaa > 2:3640011/1‑149 (MQ=255) ccGTAACCTCATAACCGCCGCGCTGTGCGTTGTTCAGAATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCTATTTAAAAATAT‑AATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGa < 1:1624100/149‑1 (MQ=255) cgtaaCCGAATAACCGCCGCGGGGTGCGTTTTTCAGAATCTGCTTTGTCGATACCACGTAATTTTTAATATCCTGTCGTTTGTTTTCTTTTTAAAAATAT‑AATTAATTTTTTTTTTTTTAAATATCGAGATAACGATCACAAACACGAc < 1:4195801/146‑1 (MQ=255) cGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACTTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGAc < 2:1303781/149‑1 (MQ=255) gAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTGGATTTCAAAATAT‑AATGAAATTATTTTTTTTTTTATATAGAGGTTACGATAAAAAAAAAGACaa > 1:2932719/1‑149 (MQ=255) gAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTGGATTTCAAAAAAA‑AATTAAAATATTTTTTTTTTAATATTGAGATAAAGATAACAAAAAAAACaa > 1:3481317/1‑149 (MQ=255) gAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTGTTGGTTTTAAAAATAT‑AAAGAAATTATATTTTTTTTAATATATATATAAAGATAACaaaaaacaaca > 1:2738843/1‑143 (MQ=255) gAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGGGTGTTAGATTTGAAAATAT‑AATGTAATTATTTTTTTTTTAATATGGTGATAACGTTGACAAAAACGACaa > 1:3479040/1‑149 (MQ=255) gAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGGGGTTTGGGGTTAAAAAAAA‑AATTTAATTATTTTTTTTTTAATTACGTGAGAACCAAAACCAAAAcaacaa > 1:2738855/1‑149 (MQ=255) ccgccgCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTCAAAATAT‑AATGAAAATATTTTTTTTTAAATATAGAGATAAAGATAACAAAAACGAAAATATGAAAatta > 2:703309/1‑149 (MQ=255) cgccgcGCTGTGCGTTGTACAGCATCTGCTTTGACGATACCACGTACATTTTCATATCCTGTCTTTTGTTTTCTATTTCAAAATAT‑AATCAATTTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAattat < 2:112490/149‑1 (MQ=255) ccgcGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGGGTTTTTGTTTTGAAAAAATAAATAAAATAATTTTTTTTTAAA‑ATATAGATAAATATAAAAAAAAAAAAAAAAAGAAAaatatta > 1:3923725/1‑148 (MQ=255) cgcgCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTAGATTTAAAAATAT‑AATGAAATTATTTTTTTTTAAATATCGAGATAAAGATAACAAAAAAGAAAATATGAAAattattag > 2:1074007/1‑147 (MQ=255) gcTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTGGTTTTCAAAATAT‑AATGAAATTATTTTTTTTTTAATATCGTGATAACGATAACAAAAACGACAAAAGTAAAAGTATTAgagg > 2:4314238/1‑149 (MQ=255) gtgCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTCCAAATAT‑AATGAAATTATTTGTTTTTAAAAATAGAGAAAACCAACACAAAAAAGACAAAATGTAAATTTTTCgcggagg > 2:2912940/1‑148 (MQ=255) gtacAGCATAGGATTTGTCGACACCCCTAAATTTTTAATATCGGGTGGTTTGTTTTCTATTAAAAAATAA‑AATGAAATTTTTTGTTTTTAAATAGCGATATAACGAAAAAAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGc < 1:479899/146‑1 (MQ=255) cttgtGCTTTGTCTAACCCACGTAATTTTTCATTTCCTGTGGTTTTTTTTCTATTTCAAAATAT‑ATTCAATTTTTTTTTTTTTAAATATCTATATACCTAAAAAAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGCaaaaaa < 1:1264095/145‑1 (MQ=255) cATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGGTTTGGTTTTGAAAAAAT‑AAATCAAATATTTTTTTTTTAATATATAGATAAACAAAAAAAAAAAGAAAAAAAAAAAAATAATAGAGGAGTGAAACGCaaaaaa > 2:3327670/1‑149 (MQ=255) tCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTAGATTTCAAAATAT‑AATGAAATTATTTTTTTTTAAATATAGAGGTAAAGATCACAAAAAAGACAATATTAAAATTATTAGAGGAGTGAAAGGCCTAAAAAc > 2:3251891/1‑149 (MQ=255) tCTGCTTTGTCGATACCACGTACATTTTCATAGCCTGTCTTTTGTTTTCGATTTCAAAATAT‑AATGAAATTATTTTTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAAc < 2:3556408/149‑1 (MQ=255) tCTGATTTGGCTATACCACTTAAATTTTCATATCCTTTCGTTTGTTTTCTATTTCAAAATAT‑AATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAAc < 2:1330671/149‑1 (MQ=255) tttGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTAAAAAAAT‑AATTAAAATATTTTTTTTTTAATATAGAGATAACGAAAACAACAAAAAAAAAAAGAAAATTTTTGGTGGGGTGTAAGGCcaaaaaaactcct > 2:776366/1‑143 (MQ=255) tttGTCGATACCACGTACATTTTCATATCCTGTCGTGTTTTTTCGATTTGAAAATAT‑AAATTAATTATTTTTTTTTTAATATCGAGATAAAGGTAAACAAAACGAAAAAATTTAAAATATTTGAGGTGGGGAAGGCAAAAAAAAGGcca > 2:1557034/1‑148 (MQ=255) tttGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGTATTAAAAATAT‑AAATAAAATATTTTTTTTTATATATAGATATAAACAAAAAAAAAAAAAAAAAATTAAAAATAATAGTGGAGTGTAATGCaaaaaaaatgcca > 2:776357/1‑143 (MQ=255) ttGTCGATACCACGTACATTTTCATATCCTGTCTTTTGTTTTCTATTTCAAAATAT‑AATTAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTc < 2:1376121/149‑1 (MQ=255) ttGTCGATACCACGAACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AATTAAATTATTTTTTTTTAAATATCGCTATAACGATCACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTc < 2:1374092/149‑1 (MQ=255) ttCGATACCACGAAAATTTTAATATCCTGTCGTTTGTTTTCTATTTAAAAATAT‑AATTAAATTATTTTTTTTTAAATATCTAGATAACTAACACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTccc < 2:899847/148‑1 (MQ=255) gTCTATACCACGTACATTTTCATATCCTGTCTTTTGTTTTCGATTTCAAAATAT‑AATTAAATTATTTTTTTTTAAATATCTAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTccc < 2:651762/149‑1 (MQ=255) gTCGATACCACTTAAATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑ATTGAAATTATTTGTTTTTAAATATCGAGATACCGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTccc < 2:651819/149‑1 (MQ=255) cGATACCACGTACATTTTCATATCCTGTCGTGTGGTTTGGGTTTGAAAATAT‑AATGTAAATATTTTTTTTTAAATATAGAGATAAAGATCACAAAAAACAAAAAATTAAAATTATTAGGGGAGTGAAAGGCCAAAAAACGGCCTACCGa > 2:2689468/1‑149 (MQ=255) gATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AATTAAATTATTTTTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGAt < 2:4415302/149‑1 (MQ=255) gATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AATGAAATTATTTTTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGAt < 2:3254494/149‑1 (MQ=255) tACCACGTACATTTTCATATCCTGTCGTGTGTTTTGGATTTAAAAAAAT‑AAATAAATTATTTTTTTTTTAATATCGTGCTAAAGATAACAAAAACCACAAAATGAAAATAATTAGAGGCGTGTAAGGCAATAAAAAAGCCAcccccgag > 2:1863939/1‑144 (MQ=255) tACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGATTTCAAAATAT‑AATGAAAATATTTTTTTTTAAATATAGAGATAACGATAACAAAAAAGACAAAATTAAAATTATTCTAGGCGTGTAAGGCAAAAAAAAGGCCTCCCGagag > 2:3849375/1‑149 (MQ=255) aCGTACATTTTCATATCCTGTCGTGTGTTTTCGATTTCAAAAAAT‑AATGTAAATATTTTTTTTTAAAAATAGAGATAAAGATAACAAAAAAGACAAAAATAAAATTATTAGAGGAGTGAAAGGCAAAAAAAAGGCCGCCCCAGAGGGaa > 2:680852/1‑149 (MQ=255) cgtaatttttCATCTCCTGTGTTTTGTTTTCGATTTCAAAATAT‑AATTAATTTTTTTTTTTTTAATTATCGATATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAg < 1:1788648/143‑1 (MQ=255) gttctttttAATATCGTTTCGTTTTTTTTAGATTAAAAAATAA‑AATTAAATTATTTTTTTTTAAATATCTTGATAACTATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGc < 2:1639348/144‑1 (MQ=255) gTACATTTTCATATCCTGTCGTTTTTTTTCTATTTCAAAATAT‑AATGAAATTATTTGTTTTTAAATATCGAGATAACTATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGc < 2:723514/149‑1 (MQ=255) tACATTTTCATATCCTGTCGTTTGTTTTCTATTTCAAAATAT‑AATGAAATTATTTGTTTTTAAATATCTATATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGcc < 2:1673293/149‑1 (MQ=255) tACATGTTCCTCCCCGGTCGTTTGTTTGCGATTTCAAAATCT‑ACTGACATTATTTGTTTTTAACTATCGAGATACCGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGcc < 2:1673506/149‑1 (MQ=255) cATATCCGGTGGTTTGTTTTCGATTTCAAAATAT‑AATTAATTTATTTTTTTTTAATTATCGAGTTAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCaaa < 2:2642042/149‑1 (MQ=255) agccTGTCTTTTGTTTTCGATTTCAAAATAT‑AATTAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTg < 2:1258490/147‑1 (MQ=255) tttgtttTCGATTTCAAAATAT‑AATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTCGCAAAGTGCGCGTGttt > 2:4196399/1‑149 (MQ=255) tttgtttTCGATTTCAAAATAT‑AATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGttt > 2:3469958/1‑149 (MQ=255) tttgtttTCGATTTCAAAATAT‑AATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGttt > 2:3470425/1‑149 (MQ=255) aTTTCAAAATAT‑AATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGa > 1:2445489/1‑149 (MQ=255) tCAAAATAT‑AATGAAATTATTTGTTTTTAAATATCGAGATACCGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGc < 2:2790004/149‑1 (MQ=255) tCAAAATAT‑AATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGc > 2:3836139/1‑149 (MQ=255) cAAAATAT‑AATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCg > 1:4424526/1‑149 (MQ=255) cAAAATAT‑AATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCg > 2:75019/1‑149 (MQ=255) cAAAATAT‑AATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCg > 2:75123/1‑149 (MQ=255) aaaaTAT‑AATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCgg > 2:3888704/1‑149 (MQ=255) atat‑AATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGgtgt > 2:2359320/1‑149 (MQ=255) tat‑aAGTAATTTTTTTTTTTTTAAATATCGAGATAACGAACACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTa < 1:1996270/149‑1 (MQ=255) taaaaTCAATTTTTTTTTTTTAAAATATCGATATAACGAACACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTa < 1:3387555/146‑1 (MQ=255) aaTGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAAc > 1:2187905/1‑149 (MQ=255) atcaaaTTTTTTTTTTTTAAATATCTATATAACTAACACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACa < 1:405811/146‑1 (MQ=255) tGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAAc < 1:1050620/147‑1 (MQ=255) tGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACAt < 2:4174942/149‑1 (MQ=255) aatttattTTTTTTTAAATATCTATATAACTATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATAc < 1:2520685/146‑1 (MQ=255) aaaTTATTTTTTTTAAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATAc < 1:2520898/149‑1 (MQ=255) aaTTATTTTTTTTTAAATATCTATAAAACTAACAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACg < 1:3774885/149‑1 (MQ=255) attattTGTTTTTAAATATCGAGATAACGATCACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGt < 2:2215042/149‑1 (MQ=255) attattTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGt > 2:4315419/1‑149 (MQ=255) ttattTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAATCGGCCTCCCGATAGGGAGGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTg > 1:2129462/1‑149 (MQ=255) ttattTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAGGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTg > 1:2129501/1‑149 (MQ=255) ttattTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTg > 1:4349941/1‑149 (MQ=255) tattTTTTTTTAAATATCGATATAACTATCAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTgg < 1:536784/149‑1 (MQ=255) tattTGTTTTTAATTATCTAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTgg < 2:1930268/149‑1 (MQ=255) tattTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTgg > 2:1268195/1‑149 (MQ=255) attTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGc < 2:3923725/149‑1 (MQ=255) attTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGc < 2:1704690/149‑1 (MQ=255) attTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGc > 2:2505905/1‑149 (MQ=255) attTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGc > 2:2729281/1‑149 (MQ=255) attTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGc > 2:3014338/1‑149 (MQ=255) tttGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCa > 1:4275170/1‑149 (MQ=255) ttGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAg > 2:2775547/1‑149 (MQ=255) tGTTTTTAAATATCTAGATAACGATCAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGt < 2:2770285/149‑1 (MQ=255) ttttttAAATATCGAGATAACGAACACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTg < 1:1074007/148‑1 (MQ=255) tttttAAATATCGATAAAACTAACAAAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGc < 1:2266464/149‑1 (MQ=255) tttttAAATATCGAGATAACGATCACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGc < 2:4421398/149‑1 (MQ=255) ttttAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCt < 1:1016682/149‑1 (MQ=255) tatAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTa < 1:3285227/147‑1 (MQ=255) aaaTATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAATCATACGTGGCAGTGCTATGt > 2:2176155/1‑149 (MQ=255) aaaTATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGt > 2:2175127/1‑149 (MQ=255) aaTATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTa > 2:2951280/1‑149 (MQ=255) atatCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAg > 1:1065902/1‑149 (MQ=255) atCGATAAAACTATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGc < 1:3729156/149‑1 (MQ=255) tctagaTAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCa < 2:3127715/146‑1 (MQ=255) gagaTAACGATCAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATg < 1:1433196/149‑1 (MQ=255) agaTAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGa > 1:1831892/1‑149 (MQ=255) agaTAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGa < 1:4371320/149‑1 (MQ=255) taactaacACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATaa < 1:1298749/149‑1 (MQ=255) aTCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGACGc > 2:492760/1‑149 (MQ=255) aTCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGACGc < 2:3035890/149‑1 (MQ=255) | AATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGACGC > CP009273/2170609‑2170904 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |