| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,080,755 | T→G | 26.1% | F231V (TTC→GTC) | metK → | S‑adenosylmethionine synthetase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,080,755 | 0 | T | G | 26.1% | 287.4 / 62.2 | 199 | F231V (TTC→GTC) | metK | S‑adenosylmethionine synthetase |
| Reads supporting (aligned to +/- strand): ref base T (48/96); new base G (53/2); total (101/98) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.71e-17 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 213 total aligned reads displayed.
CGATGCTGTCGTGCTTTCCACTCAGCACTCTGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATCCATCAAAAGTGGACCGTTCCGCAGCCTACGCAGCAC > CP009273/3080607‑3080902 | cGATGCTGTCGTGCTTTCCACTCAGCACTCTGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGtcgtt < 2:1060270/149‑1 (MQ=255)cGATGCTGTCGTGCTTTCCACTCAGCACTCTGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGtcgtt < 2:4179837/149‑1 (MQ=255) aTGCTGTCGTGCTTTCCACTCAGCACTCTGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGtcgtttg > 1:1016140/1‑148 (MQ=255) tGTCGTGCTTTCCACTCAGCACTCTGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTa < 1:2111534/149‑1 (MQ=255) tGTCGTGCTTTCCACTCAGCACTCTGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGTCGTTa > 1:3207930/1‑149 (MQ=255) tGCTTTCCACTCAGCACTCTGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGt < 1:278122/149‑1 (MQ=255) gCTTTCCACTCAGCACTCTGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTg > 2:3354598/1‑149 (MQ=255) ccACTCAGCACTCTGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGGCGTTATCGGTGGcccc > 1:1558432/1‑148 (MQ=255) cAGCACTCTGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGGCCCAATggg < 1:1335094/149‑1 (MQ=255) cAGCACTCTGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGGGGCCCAAAggg > 2:2988536/1‑149 (MQ=255) cAGCACTCTGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGTCGTTATCGGTGGCCCaaatgg > 2:2577389/1‑145 (MQ=255) aGCACTCTGATGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGGCCCAATGGGt < 1:1146333/149‑1 (MQ=255) aGCACTCTGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGGCCCAATGGGt > 2:612720/1‑149 (MQ=255) aCTCTGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGGCCCAATGGGTGAc < 1:3106271/149‑1 (MQ=255) aCTCTGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGGCCCAATGGGTGAc < 2:706589/149‑1 (MQ=255) ctctGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGTCGTTATCGGTGGCCCAAATGGTGACt > 1:3400046/1‑149 (MQ=255) ctctGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGTCGTTATAGGGGGCCCAATGGGTGaaa > 1:688276/1‑147 (MQ=255) tctGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGGCCCAATGGGTGACTg > 2:3158337/1‑149 (MQ=255) ctGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGTCGGTTTCGGTGGCCCCATGGGGGGCTGc > 2:407521/1‑149 (MQ=255) tGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGGCCCAATGGGTGACTGCg > 2:2391660/1‑149 (MQ=255) tGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGGCCCAATGGGTGACTGCg > 2:2357598/1‑149 (MQ=255) agagATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGGCCCAATGGGTGACTGCGGTc < 2:3809737/149‑1 (MQ=255) agagATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGGCCCAATGGGTGACTGCGGTc < 1:1640749/149‑1 (MQ=255) agaTCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGGCCCAATGGGTGACTGCGGTCTg < 2:104139/149‑1 (MQ=255) tCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTAGTTATAGGTGGCCCAATGGGTGACTGCGGTCTGACt > 2:2344367/1‑149 (MQ=255) aCCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGGCCCAATGGGTGACTGCGGTCTGACTGGt < 2:3587759/149‑1 (MQ=255) aCCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGGCCCAATGGGTGACTGCGGTCTGACTGGt < 2:73504/149‑1 (MQ=255) aCCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGTAGTTATAGGTGGCCCAAAGGGTTTCTGCGGTCTGACTGGt > 1:3194607/1‑149 (MQ=255) ccAGACATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGGCCCAATGGGTGACTGCGGTCTGACTGGTc < 1:3407270/149‑1 (MQ=255) cAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGGCCCAATGGGTGACTGCGGTCTGACTGGTCg < 1:773740/149‑1 (MQ=255) gAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGTCGTTATCGGTGGCCCAATGGGTGACTGCGGTCTGACTGGTCGTa > 1:2399812/1‑149 (MQ=255) cGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGGCGGTTTCGGTGGGCCCAGGGGTGGCAGCCGTCGGAGTGGGCGGGAAAtt > 1:163313/1‑149 (MQ=255) gCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTa < 1:1519318/149‑1 (MQ=255) tGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATc < 2:3654456/149‑1 (MQ=255) gCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCg < 1:1014664/149‑1 (MQ=255) gCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCg < 2:1321101/149‑1 (MQ=255) cAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGt < 2:1268337/149‑1 (MQ=255) aagaagCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGtt < 2:2011556/149‑1 (MQ=255) aagaagCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGtt < 2:3885002/149‑1 (MQ=255) gaagCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGGGGTTATCGGTGGCCCACAGGGTGTCTGCGGTCTGACTGGGCGTAAAATTATCGTTGa > 1:3901821/1‑149 (MQ=255) aagCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATAGGTGGCCCAATGGGTGTATGCGGTCTGACTGGTCGTAAAAATATAGttttt > 1:4294139/1‑146 (MQ=255) gCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATAc < 2:2002968/149‑1 (MQ=255) gCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGTGGGTATAGGTGGGCCCATGGGTGACTGGGGGCTTGCGTGTGGTGTAATTATCGttttttg > 1:1956174/1‑144 (MQ=255) gCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGTCGGTATAGGTGGCCCCAAGGGTGCCTGCGGTCTGACTGGTCGTAAAAATAACGTTGATaa > 2:3378570/1‑148 (MQ=255) gTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGTCGTTATCGGTGGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTa > 2:2889687/1‑149 (MQ=255) tAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGGTATAGGTGGCCCAAAGGGTGACAGCGGTCTGACTGGTCGTAAAAATATAGTTTATAACTAc > 1:2189082/1‑149 (MQ=255) aaTGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGTCGTTATAGGTGGGCCCATGGGTGACGGCGGTCTGGATGGTCGTAAAATTATAGTTTATAACTAcc > 1:199972/1‑148 (MQ=255) ggAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTAcggcg < 2:358838/149‑1 (MQ=255) aaGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATAGGTGGCCCAATGGGTGAAAGCGGTCTGACTGGTCGTAAAATTATAGTTGATACCTACggcggc > 1:4038116/1‑149 (MQ=255) gaTCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTGGTTATCGGTGGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATgg > 2:2116588/1‑149 (MQ=255) atcatcAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATAGGTGGCCCCAAGGGTGACTGCGGTCTGGCGGGTCGTAAAAATATCGTTGTTACCTACCGCGGCATGgc > 1:2863683/1‑149 (MQ=255) tcatcaAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTAGTTATAGGTGGCCCAATGGGTGACTGCGGTCTTACTTGTCGGAAAATTATAGTTGATAACTACGGCGGCATTgcg > 1:3242764/1‑149 (MQ=255) atcaAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGGCCCAATGGGTGACTGCGGTCTGCCTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGcgcg > 2:3196366/1‑149 (MQ=255) atcaAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGTCGTTATCGGTGGCCCAAAGGGTGGCTGCGGTCTGGCTGGTCGGAAAAATATAGTTGTTAACAAAGGCGGCCTGGcgcg > 2:1867374/1‑149 (MQ=255) caAGCCAAGTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAAGTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTc < 2:2713834/149‑1 (MQ=255) aaGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGTGGGTTTGGGTGGGCCCAAGGGTGTGTGCGGGGTGTCTGGTGGGTAAAATATAGTTGTTAAAAAAGGCGGCAAGGcgcggga > 1:75374/1‑146 (MQ=255) aGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGTGGTTATAGGTGGGCCAATGGGTGACGGCGGTGTGACAGGTCGTGAAAATATGGTTGTTTCCAACGGCGGCCAGGCGCGTCAc > 1:539739/1‑149 (MQ=255) aGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGGGGTTATAGGTGGGCCAATGGGTGTGTGCGGTCGGACTGGTCGGAAAAATATCGTTGTTAACAACGGCGGCCTGGCGCGGCAc > 1:458413/1‑149 (MQ=255) aGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGGGGTTATAGGTGGCCCAAAGGGTGGCGGCGGGGTGTCGGGTGGGAAAATTATAGTTTATACCTACGGCGGCATGGCGCGGCaa > 1:983199/1‑148 (MQ=255) cAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGt < 1:2337729/149‑1 (MQ=255) aaTTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATTCCTACGGCGGCATGGCGCGTCACGGTg > 2:1778899/1‑149 (MQ=255) aTTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGTGGGTATCGGTGGCCCCAAGGGTGTCGGCGGTGTGTCAGGTGGGTAAAATATAGTTGATTAAGAAGGCGGCCTGGCGCGTCACGGTgg > 1:851587/1‑149 (MQ=255) ttCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGc < 1:529319/149‑1 (MQ=255) ttCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGTCGTTATAGGTGGCCCAAAGGGTGACAGCGGTCTGACGGGGCGGAAAAATATCGTTTTTAACGAAGGCGGCATGGCGCGTCACGGTGGc > 1:1786213/1‑149 (MQ=255) tGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGt < 1:1923732/149‑1 (MQ=255) gCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGTCGTTATCGGTGGCCCAATGGGTGACTGCGGTCTGACGGGTCGGAAAATTATCGGTGATACCTACCGCGGCAAGGCGCGGCACGGTGGCGGTg > 2:42561/1‑149 (MQ=255) ccGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCa < 2:3950097/149‑1 (MQ=255) gAATGGCTGACTTCTGCCACCAACTTCTTCATCAACCCGACCGGTCGTGTCGTTATCGGTGGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATtctc < 1:4225067/149‑1 (MQ=255) aaTGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATAGGTGGCCCAATGGGTGACTGCGGTCTGTCTGGTCGTAAAATTATAGTTGATACCAAAGGCGGCATGGCGCGTCAAGGTGGCGGTGCATTctct > 2:1249979/1‑149 (MQ=255) aaTGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATACGTGGCCCAAAGGGTGAAGGCGGTCTGTCTGGGCGGAAAATTATAGTTGTTACCAACGGCGGCATGGCGCGTCACCGTGGCGGTGCATTctct > 1:2497649/1‑149 (MQ=255) aTGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGTAGTTATCGGTTGCCCAATGGGTGACTGCCGTATGAATGGTCGTAAAAATATAGGTTATACCTACGGCGGCAAGGCGCGTCACCGTGGCGGGGCATtctcag > 1:371568/1‑147 (MQ=255) gCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGGCCCAAAGGGTGACTGCGGTCTGACAGGTCGTAAAAATATCGTTGATACCAACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTa > 2:2839366/1‑149 (MQ=255) tGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTaaa < 1:3127284/149‑1 (MQ=255) gACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGGCCCAATGGGTGACTGCGGTCTGACGGGTCGTTAAATTATCGTTTATACCAACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAg > 2:1920268/1‑149 (MQ=255) aCTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGTAGTTATAGGTGGCCCCAGGGGTGACTGCGGTCTGACTGGGCGTAAAATTATAGTTGATACCTACCGCGGCCATGCGCGTCACGGTGGCGGTGCCTTCTCTGGTaaata > 2:2607529/1‑147 (MQ=255) cTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGAt < 1:1727602/149‑1 (MQ=255) cTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGAt > 2:2515350/1‑149 (MQ=255) cTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGAt < 2:2103362/149‑1 (MQ=255) cTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGAt < 2:1562415/149‑1 (MQ=255) cTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATAGGTGGCCCAATGGGTGACTGCGGTCTGAATGGTCGTAAAAATATAGTTTTTACCTAAGGCGGCATTGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGAt > 2:144062/1‑149 (MQ=255) ttCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATc < 1:1280412/149‑1 (MQ=255) cTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATCCa < 2:444343/149‑1 (MQ=255) cTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATCCa < 1:25457/149‑1 (MQ=255) cTGCCACCAAATTCGTCATCAACCCGACCGGTCGTTTCGTTATCGGTGGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATCCa < 2:2482577/149‑1 (MQ=255) tGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATCCAt < 2:1389874/149‑1 (MQ=255) gCCACCAAATTCTTCATCAACCCGACCGGTCGTGTCGTTAAAGGTGGCCCAAAGGGTGACTTCGGTCTGACTGGTCGTAAAAATAAAGTTTATAACAACCGCGGCAATGCCCGTCACCGGGGCGGTGCAATCACTGGTAAATATACaac > 1:2896296/1‑147 (MQ=255) accaAATTCTTCATCAACCCGACCGGTCGTGTCGTTATCGGTGGCCCAATGGGTGACAGCGGGCTGACTGGTCGTAAAATTATAGTTGATAACTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATCCATaaaa > 2:219401/1‑149 (MQ=255) tcttcATCAACCCGACCGGTCGTTTCGTTATCGGTGGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATCCATCAAAAGTGGAc < 2:3341693/149‑1 (MQ=255) tcttcATCAACCCGACCGGTCGTTTCGTTATCGGTGGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATCCATCAAAAGTGGAc < 1:731749/149‑1 (MQ=255) tcatcaACCCGACCGGTCGTTTCGTTATCGGTGGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATCCATCAAAAGTGGACCGt < 2:3235222/149‑1 (MQ=255) tcatcaACCCGACCGGTCGTTTCGTTATCGGTGGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATCCATCAAAAGTGGACCGt < 2:3624149/149‑1 (MQ=255) aCCCGACCGGTCGTTTCGTTATCGGTGGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATAGTTGATAACTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATCCCTCAAAAGTGGACCGTTCCGCa > 2:3982024/1‑149 (MQ=255) aCCCGACCGGTCGTTTCGTTATCGGTGGCCCAAAGGGTGACTGCGGTCTGACGGGTCGTAAAATTATCGTTGATACCAACCGCGGCAAGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATCCAACAAAAGTGGACCGTTCCGCa > 2:2881810/1‑149 (MQ=255) aCCCGACCGGTCGTTTAGTTATAGGTTGCCCAATGGGTGAATGCGGTCTGACTGGTAGTAAAATTATAGTTTATAACAAACGCGGCAAGGCGCGTCACGGTGGCGGTGCATTATATGGTAAAGATACATAAAAAGTGGACCGTTACGCa > 2:1265653/1‑149 (MQ=255) cccGACCGGTCGTGTAGTTATCGGTGGCCCAAAGGGTGACTGCGGTCTGACAGGTCGTAAAATTATACTTTATACCTACCGCGGCATTGCGCGGCACGGTGGCGGTGCAATATAAGGTAAAGATCCATCAAAAGTGGACCGTTCCGCac > 2:887995/1‑148 (MQ=255) ccGGTCGTTTCGTTATCGGTGGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATCCATCAAAAGTGGACCGTTCCGCAGCCTAc < 2:412517/149‑1 (MQ=255) ggTCGTTTCGTTATAGGTGGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATAGTTGATACCTAAGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATCCATCAAAACTGGACCGTTACGCAGCCAAccc > 2:2289719/1‑147 (MQ=255) ggTCGTGTCGTTATAGGTGGCCCCAAGGGTGACAGCGGTCTTACTGGTCGTAAAATTATCGTTGATAACAAAGGCGGCATGGCCCGTCACCGTGGCGGTGCAATCACAGGTAAATATACATAAAAAATGGACCGTTCCGCAGCCAAccc > 2:1845792/1‑147 (MQ=255) tcgtttcgttATCGGTGGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATCCATCAAAAGTGGACCGTTCCGCAGCCTACgcag > 1:1258143/1‑149 (MQ=255) gtttcgttATCGGTGGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATCCATCAAAAGTGGACCGTTCCGCAGCCTACgcagca < 2:3801039/149‑1 (MQ=255) | CGATGCTGTCGTGCTTTCCACTCAGCACTCTGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATCCATCAAAAGTGGACCGTTCCGCAGCCTACGCAGCAC > CP009273/3080607‑3080902 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |