| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,602,367 | T→A | 9.2% | intergenic (‑11/‑210) | tusA ← / → yhhQ | mnm(5)‑s(2)U34‑tRNA 2‑thiolation sulfurtransferase/DUF165 family inner membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,602,367 | 0 | T | A | 9.2% | 686.9 / 7.0 | 229 | intergenic (‑11/‑210) | tusA/yhhQ | mnm(5)‑s(2)U34‑tRNA 2‑thiolation sulfurtransferase/DUF165 family inner membrane protein |
| Reads supporting (aligned to +/- strand): ref base T (102/102); new base A (2/20); total (104/125) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.82e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 238 total aligned reads displayed.
CGGATCGTCGGCGATAATCAGCAACGTTTCGCCAGGCTGCATATTGCGCACGGTTTTGCGCACCATCATCACCGGTTCCGGGCAGCGCAGGCCAAGCGCGTCGAGTGTGTGGTCAGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTT‑AACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATGCGGCGGCTCGAAAAAAGGGTAAGCACGTTATTATGTTAAG > CP009273/3602219‑3602514 | cGGATCGTCGGCGATAATCAGCAACGTTTCGCCAGGCTGCATATTGCGCACGGTTTTGCGCACCATCATCACCGGTTCCGGGCAGCGCAGGCCAAGCGCGTCGAGTGTGTGGTCAGGGCTGGAAAAGAGATCGGTCATTTTCTTCtcat < 1:2902045/149‑1 (MQ=255) ggATCGTCGGCGATAATCAGCAACGTTTCGCCAGGCTGCATATTGCGCACGGTTTTGCGCACCATCATCACCGGTTCCGGGCAGCGCAGGCCAAGCGCGTCGAGTGTGTGGTCAGGGCTGGAAAAGAGATCGGTCATTTTCTTCtcatc < 1:3583234/149‑1 (MQ=255) aTCGTCGGCGATAATCAGCAACGTTTCGCCAGGCTGCATATTGCGCACGGTTTTGCGCACCATCATCACCGGTTCCGGGCAGCGCAGGCCAAGCGCGTCGAGTGTGTGGTCAGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCAc > 2:1628979/1‑149 (MQ=255) aTCGTCGGCGATAATCAGCAACGTTTCGCCAGGCTGCATATTGCGCACGGTTTTGCGCACCATCATCACCGGTTCCGGGCAGCGCAGGCCAAGCGCGTCGAGTGTGTGGTCAGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCAc < 1:3515703/149‑1 (MQ=255) aTCGTCGGCGATAATCAGCAACGTTTCGCCAGGCTGCATATTGCGCACGGTTTTGCGCACCATCATCACCGGTTCCGGGCAGCGCAGGCCAAGCGCGTCGAGTGTGTGGTCAGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCAc > 2:3844818/1‑149 (MQ=255) cgtcgGCGATAATCAGCAACGTTTCGCCAGGCTGCATATTGCGCACGGTTTTGCGCACCATCATCACCGGTTCCGGGCAGCGCAGGCCAAGCGCGTCGAGTGTGTGGTCAGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACtt < 1:4348463/149‑1 (MQ=255) ggCGATAATCAGCAACGTTTCGCCAGGCTGCATATTGCGCACGGTTTTGCGCACCATCATCACCGGTTCCGGGCAGCGCAGGCCAAGCGCGTCGAGTGTGTGGTCAGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACTTaaaa > 2:3941768/1‑149 (MQ=255) ggCGATAATCAGCAACGTTTCGCCAGGCTGCATATTGCGCACGGTTTTGCGCACCATCATCACCGGTTCCGGGCAGCGCAGGCCAAGCGCGTCGAGTGTGTGGTCAGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACTTaaaa > 2:3942281/1‑149 (MQ=255) gCGATAATCAGCAACGTTTCGCCAGGCTGCATATTGCGCACGGTTTTGCGCACCATCATCACCGGTTCCGGGCAGCGCAGGCCAAGCGCGTCGAGTGTGTGGTCAGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACTTaaaaa > 1:2915439/1‑149 (MQ=255) gATAATCAGCAACGTTTCGCCAGGCTGCATATTGCGCACGGTTTTGCGCACCATCATCACCGGTTCCGGGCAGCGCAGGCCAAGCGCGTCGAGTGTGTGGTCAGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACTTaaaaaaa > 2:3731884/1‑149 (MQ=255) gCAACGTTTCGCCAGGCTGCATATTGCGCACGGTTTTGCGCACCATCATCACCGGTTCCGGGCAGCGCAGGCCAAGCGCGTCGAGTGTGTGGTCAGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTa > 2:2901553/1‑149 (MQ=255) gCAACGTTTCGCCAGGCTGCATATTGCGCACGGTTTTGCGCACCATCATCACCGGTTCCGGGCAGCGCAGGCCAAGCGCGTCGAGTGTGTGGTCAGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTa > 2:3021032/1‑149 (MQ=255) aCGTTTCGCCAGGCTGCATATTGCGCACGGTTTTGCGCACCATCATCACCGGTTCCGGGCAGCGCAGGCCAAGCGCGTCGAGTGTGTGGTCAGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGtt > 2:3448670/1‑149 (MQ=255) aCGTTTCGCCAGGCTGCATATTGCGCACGGTTTTGCGCACCATCATCACCGGGTCCGGGCAGCGCAGGCCAAGCGCGTCGAGTGTGTGGTCAGGGCTGGAAAAGAGATCGGTCATATTCTTCTCATCACTTAAAAAAACGGCGCTAGtt > 2:2241469/1‑149 (MQ=255) cGTTTCGCCAGGCTGCATAGTGCGCACGGTTTTGCGCACCATCATCACCGGTTCCGGGCAGCGCTGGCCAAGCGCGTCGAGTGTGTGGTCTGGGCTGGAAAATAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGttt < 2:2934077/149‑1 (MQ=255) tttCGCCAGGCTTCATATTGCGATGGTTTTTGCGCACAATCATCACGGGTTCCGGGCTGCGCAGGCCACGCGCTTGGTGTGTGTGGTCTGGGCTGTAAAATTGATCGGTAATTTTCTTCTCATAACTTAAAAAAACGGCGCTAGTTTAc < 1:3942717/149‑1 (MQ=255) cGCCAGGCTGCATATTGCGCACGGTTTTGCGCACCATCATCACCGGTTCCGGGCAGCGCAGGCCAAGCGCGTCGAGTGTGTGGTCAGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGcc > 1:613482/1‑149 (MQ=255) gCCTGGCTGCATATTGCGCACGTTTTTGCGCACCATAATCACCGGTTCCGGGCAGCGCAGGCCAAGCGCGTCGTGTTTGTGGTCTGGGCTGGAAAAGAGATCGGTCTTTTTCTACTCATCACTTAAAAAAACGGCGCTAGTTTACGccc < 2:562109/149‑1 (MQ=255) gCCAGGCTGCATATTGCGCACGGTTTTGCGCACCATCATCACCGGTTCCGGGCAGCGCAGGCCAAGCGCGTCGAGTGTGTGGTCTGGGCTGTAAAAGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGccc < 2:282391/149‑1 (MQ=255) gCCAGGCTGCATATTGCGCACGGTTTTGCGCACCATCATCACCGGTTCCGGGCAGCGCAGGCCAAGCGCGTCGAGTGTGTGGTCAGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGccc > 1:3691143/1‑149 (MQ=255) tggCTGAATTTTGCGCCGGTTTTTGCGCACCATCATCACGGGTTCCGGGCAGCGCTGGCCAAGCGCGTCGTGTGTGTGGTCTGGGTTGTAAAATAGATCGTTCTTTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCtgt < 1:3662234/148‑1 (MQ=255) aGGCTGCATATTGCGCACGGTTTTGCGCACCATCATCACCGGTTCCGGGCAGCGCAGGCCAAGCGCGTCGAGTGTGTGGTCAGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCtgt > 1:843958/1‑149 (MQ=255) aGGCTGCATATTGCGCACGGTTTTGCGCACCATCATCACCGGTTCCGGGCAGCGCAGGCCAAGCGCGTCGAGTGTGTGGTCAGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCtgt > 2:2344334/1‑149 (MQ=255) gCATATTGCGCTCGGTTTTGCGCACCATCATCACCGGTTCCGGGCTGCGCTGGCCAAGCGCGTCGTGTGTGTGGTCCGGGCTGGAAAAGAGTTGGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTc < 2:1953323/149‑1 (MQ=255) aattttGCGCACGGTTTTGCGCACCATCATCACGGGTTCCGGGCAGCGCTGGCAAAGCGCGTCGTGTGTGTGGTCTGGGCTGTAAAAGAGATCGTTCTTTTTCTTCTCACCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTcc < 2:3691143/145‑1 (MQ=255) tatTGCGCACGGTTTTGCGCACCATCATCACCGGTTCCGGGCAGCGCAGGCCAAGCGCGTCGTGTGTGTGGTCAGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGt < 2:1755214/149‑1 (MQ=255) tatTGCGCACGGTTTTGCGCACCATCATCACCGGTTCCGGGCAGCGCAGGCCAAGCGCGTCGAGTGTGTGGTCAGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGt > 2:1863466/1‑149 (MQ=255) taatGCGCAAGGTTTTGCGCACCATCATCACCGGTTCCGTGCAGCGCAGGCCAAGCGCGTCGAGTGTGTGGTCAGGGATGGAAAAGAGATAGGTCATTTTCATATCAACACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCga > 2:1862928/4‑148 (MQ=255) ttGCGCACGGTTTTGCGCACCATCATCACCGGTTCCGGGCAGCGCAGGCCAAGCGCGTCGAGTGTGTGGTCAGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTaa > 1:480490/1‑149 (MQ=255) ttGCGCACGGTTTTGCGCACCATCATCACCGGTTCCGGGCAGCGCAGGCCAAGCGCGTCGAGTGTGTGGTCAGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTaa > 1:3996304/1‑149 (MQ=255) gcgcACGGTTTTGCGCACAAACATCACCGGTTCCGGGCTGCGCTGGCCACGCGCGTGGTGTGTGTGGTCAGGGCTGTAAAAGTGATCGTTCATTTTCTTCTAATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGc < 1:1766814/149‑1 (MQ=255) cGGTTTTGCGCACCATCATCACCGGTTCCGGGCAGCGCAGGCCAAGCGCGTCGAGTGTGTGGTCAGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACt > 1:1262113/1‑149 (MQ=255) ggTTTTGCGCACCATCAACCCGGGTGCCGGGCCGCGCGGGCCACGCGCGTCGTGTGTGTGGTCTGGGCTGGAAAATTTATCGGTCTTTTTTTCCTCATCAATTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTa < 1:2252425/149‑1 (MQ=255) tttttGCGCACCATCATCACCGGTTCCGGGCAGCGCAGGCCAAGCGCGTCGTGTGTGTGGTATGGGCTGGAAAATAGATGGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAg < 2:804797/148‑1 (MQ=255) ttGCGCACCATCATCACCGGTTCCGGGCAGCGCAGGCCAAGCGCGTCGAGTGTGTGGTCCGGGATGTAAAATAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGtt < 2:2147487/149‑1 (MQ=255) tGCGCACCATCATCACCGGTGCCGGGCAGCGCAGGCCAAGCGCGTCGAGTGTGTGGTCAGGGCTGGAAAAGAGATCGTTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTT‑a < 2:203361/149‑1 (MQ=255) gcgcACCATCATCACGGGTTCCGGGCAGCGCTGGCCACGCGCGTGGTGTGTGTGGTCCGGGCTGTAAAAGAGATCGGTATTTTTCTTCTCATCAATTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTT‑aa < 1:1732967/149‑1 (MQ=255) gcgcACCATCATCACCGGTTCCGGGCAGCGCAGGCCACGCGCGTCGTGTGTGTGGTCTGGGCTGTAAAAGATATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTT‑aa < 1:1038121/149‑1 (MQ=255) gcgcACCATCATCACCGGTTCCGGGCAGCGCAGGCCAAGCGCGTCGAGTGTGTGGTCAGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTT‑aa < 2:2561890/149‑1 (MQ=255) cgcACCATCATCCCCGGTTCGGGGCAGCGCAGGCCAAGCGCGTCGAGTGTGTGGTCTGGGCTGGAAAAGAGATCGGTAATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTT‑AAc < 2:1965227/149‑1 (MQ=255) cgcACCAACATCCCGGGTTCGGGGACGCGCAGGCCAAGCGCTTCGAGTGTGGGTTCAGGGCTGTAAAATATATCGGTAATTTTCTTCTCATCAATTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTT‑AAc < 1:2007908/149‑1 (MQ=255) cgaaCCATCATCACCGGTTCCGGGCAGCGCTGGCCACGCGCGTCGAGTGTGTGGTCAGGGCTGTAAAAGAGATCGGTACTTTTCTTCTAATCAATTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTT‑AAc < 1:2008178/146‑1 (MQ=255) ccATCATCACCGGTTCCGGGCAGCGCAGGCCAAGCGCGTCGAGTGTGTGGTCAGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTT‑AACGAtt > 2:2742371/1‑149 (MQ=255) atcatcACCGGTTCCGGGCAGCGCAGGCCAAGCGCGTCGAGTGTGTGGTCAGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTT‑AACGATTGc > 1:2804362/1‑149 (MQ=255) tcaCCGGTTCCGGGCAGCGCAGGCCAAGCGCGTCGAGTGTGTGGTCAGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTT‑AACGATTGCGTGa > 1:1600860/1‑149 (MQ=255) caCCGGTTCCGGGCAGCGCAGGCCAAGCGCGTCGAGTGTGTGGTCAGGGCTGTAAAAGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTT‑AACGATTGCGTGaa < 2:4249502/149‑1 (MQ=255) aCCGGTTCCGGGCAGCGCAGGCCAAGCGCGTCGAGTGTGTGGTCAGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTT‑AACGATTGCGTGaaa > 2:3177315/1‑149 (MQ=255) cgggTGCCGGGCAGCGCTGGCCACGCGCGTCGTGTGTGTGGGCTGGGCTGTAAAAGATATCGGTAATTTTATTCTCATCAATTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTT‑AACGATTGCGTGaaaa < 1:3940212/147‑1 (MQ=255) cGGTTCCGGGCAGCGCCGGCCACGCGCGTCGAGTGTGTGGTCTGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTT‑AACGATTGCGTGAAAAt < 1:1045387/149‑1 (MQ=255) ttCCGGGCCGCGCCGGCCAGGGGGGTCGTTTGTTTGGTCTGGGATTTAAAATAGATGGTTCTTTTTCTTAACAAAAATAAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTT‑AACGATTGCGTGAAAATTaa < 1:118430/149‑1 (MQ=255) tggcgggccgggcCGGCCACGGGGGTGGTGGGTGTGGTCTGGGCTGTAAAATTTATGGGTCTTTTTCTTCTAAACAATTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTT‑AACGATTGCGTGAAAATTaa < 1:3807081/146‑1 (MQ=255) gtcggggCCGCGCTGGCCCCGGGCGTGGTGTGTGTGGTCTGGGCTGGAAATGTGTTGGGTCTTTTTTTTCACATCAATTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTT‑AACGATTGCGTGAAAATTaa < 1:3807043/145‑1 (MQ=255) gggCAGCGCAGGCCACGCGCGTCGAGTGTGTGGTCAGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTT‑AACGATTGCGTGAAAATTAACcat < 2:1363351/149‑1 (MQ=255) cgcgcCGGCCATGGGCGTGGTGTGTGGGGTCCGGGTTGAAAAAGTGTTCGGTAATTTTCTAATAAACAATAAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTT‑AACGATTGCGTGAAAATTAACcattgca < 1:1864888/148‑1 (MQ=255) gcgcAGGCCAAGCGCGTCGAGTGTGTGGTCAGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTT‑AACGATTGCGTGAAAATTAACcattgcat > 2:96357/1‑149 (MQ=255) cgcAGGCCAAGCGCGTCGAGTGTGTGGTCAGGGCTGGAAAACATATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTT‑AACGATTGCGTGAAAATTAACcattgcatt < 2:2520455/149‑1 (MQ=255) ggCCAAGCGCGTCGAGTGTGTGGTCAGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTT‑AACGATTGCGTGAAAATTAACCATTGCATTGTCa > 2:4320633/1‑149 (MQ=255) aaGCGCTTCGTGTGTGTGGTCTGGGCTGTAAATGAGATGGGTCATTTTCTTCTCAACACTAAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTT‑AACGATTGCGTGAAAATTAACCATTGCATTGTCAACGt < 1:196214/149‑1 (MQ=255) aGCGCGTCGAGTGTGTGGTCAGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTT‑AACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTa > 2:870987/1‑149 (MQ=255) gcgcGTCGAGTGTGTGGTCAGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTT‑AACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTaa > 2:2444216/1‑149 (MQ=255) cgcgTCGTGTGTGTGGTCAGGGCTTTAAAAGAGTTGTGTCTTTTTCTCCACATCAATAAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTT‑AACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTaaa < 1:4095215/149‑1 (MQ=255) gcgTCGATTGTGTGGTCAGGGCTGTAAAAGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTT‑AACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAg < 2:2740782/149‑1 (MQ=255) cttCGAGTGTGTGGTCAGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTT‑AACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGc < 2:2813644/147‑1 (MQ=255) cgTCGAGTGTGTGGTCTGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCAACACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTT‑AACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGc < 1:2180573/149‑1 (MQ=255) gTCGAGTGTGTGGTCAGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTT‑AACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCa > 1:2191947/1‑149 (MQ=255) aGTGTGTGGTCAGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTT‑AACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTAt > 1:5697/1‑149 (MQ=255) gtgtgtgtTCTGGGCTGTAAAAGAGATCGTTAATTTTCTTCACAACAATAAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTT‑AACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATc < 1:2341463/149‑1 (MQ=255) gtgtgGTCAGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTT‑AACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCAt > 2:2846494/1‑149 (MQ=255) gtgtgGTCAGGGCTGGAAAAGAGAGCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTT‑AACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCAt < 2:2321411/149‑1 (MQ=255) tgtgGTCAGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTT‑AACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATg > 2:3050372/1‑149 (MQ=255) tgtgGTCAGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTT‑AACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATg > 1:2506919/1‑149 (MQ=255) tggggTCAGGGCTGTAAAAGAGATCGGTCATTTTCTTCTCATCAATTAAAAAAACGGCGCGAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTT‑AACGATTGCGTGAAAATTAACCAGTGCATTGTCAACGTAAAGCAGTATCATg < 2:3139699/146‑1 (MQ=255) gtgGTCTGGGATGTAAATTAGATGGGTAATTTACTTCTCATCAATTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTT‑AACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATgc < 2:3396754/149‑1 (MQ=255) tgttCAGGGGTGTAAAAGTTTTGGGTCATTTTTTTAACATACCTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTT‑AACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATgcg < 1:2901553/146‑1 (MQ=255) gggCTGTAAAAGAGCTCGGTCATTTTCTACTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTT‑AACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATGCGGCGGCt < 1:3150156/149‑1 (MQ=255) gggCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTT‑AACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATGCGGCGGCt < 2:82959/149‑1 (MQ=255) ggCTGGAAAAGAGATCGGTCATTTTCTTCTCAACACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTT‑AACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATGCGGCGGCTc < 1:3663244/149‑1 (MQ=255) aaaGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGT‑AGCAAACAAAGTTAAACAATTCCTTAAAAATAAACAATT‑CAATTTAAAACTAAAGCAATAAAATGCGGCCGCTACaaaaaaa > 2:1139119/1‑148 (MQ=255) aaaGAGATCGGTCATTTTCTTCTAATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTT‑AACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATGCGGCGGCTCGaaaaaa < 1:1420995/149‑1 (MQ=255) aaaGAGATCGGTAATTTTCTTCTCATAACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTT‑AACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATGCGGCGGCTCGaaaaaa < 2:4102135/149‑1 (MQ=255) aaGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTT‑AACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATGCGGCGGCTCGAAAAAAg > 2:662008/1‑149 (MQ=255) aaGAGATCGGTCATTTTCTTCTCAACACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTT‑AACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATGCGGCGGCTCGAAAAAAg < 1:2171765/149‑1 (MQ=255) agagATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTT‑AACGATTGCGTGAAAATTAACCATTGAATTTTCAACGTAAAGCAGTATCATGCGGCGGCTCGAAAAAAgg > 2:2340963/1‑149 (MQ=255) gagaTCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTT‑AACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATGCGGCGGCTCGAAAAAAggg > 2:789864/1‑149 (MQ=255) tCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTT‑AACGATTGCGTGAAAATTAACCAATGCATTGTCAACGAAAAGCAGTATCATGCGGCGGCTCGAAAAAAGGCTAAg > 2:4046215/1‑149 (MQ=255) gttatttttATTCTAATAACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTT‑AACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATGCGGCGGCTCGAAAAAAGGGTAAGCa < 1:4159042/144‑1 (MQ=255) ggTCATTTTCTTATCATCCCTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTT‑AACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATGCGGCGGCTCGAAAAAAGGGTAAGCa < 1:3630132/149‑1 (MQ=255) gacATTTTCTTCACATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTT‑AACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATGCGGCGGCTCGAAAAAAGGGTAAGCAc < 2:105076/147‑1 (MQ=255) tCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTT‑AACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATGCGGCGGCTCGAAAAAAGGGTAAGCACg > 1:2727167/1‑149 (MQ=255) tCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTT‑AACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATGCGGCGGCTCGAAAAAAGGGTAAGCACg > 1:3136119/1‑149 (MQ=255) aTTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTT‑AACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATGCGGCGGCTCGAAAAAAGGGTAAGCACGtt > 1:1678294/1‑149 (MQ=255) aTTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTT‑AACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATGCGGCGGCTCGAAAAAAGGGTAAGCACGtt < 2:350476/149‑1 (MQ=255) ttcttcAAATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTT‑AACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATGCGGCGGCTCGAAAAAAGGGTAAGCACGttatt < 1:3942254/149‑1 (MQ=255) ttctCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTT‑AACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATGCGGCGGCTCGAAAAAAGGGTAAGCACGTTATTATg < 2:3996304/149‑1 (MQ=255) ttctCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTT‑AACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATGCGGCGGCTCGAAAAAAGGGTAAGCACGTTATTATg < 2:480490/149‑1 (MQ=255) acacatcaCTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTT‑AACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATGCGGCGGCTCGAAAAAAGGGTAAGCACGTTATTATGt < 1:1069300/146‑1 (MQ=255) tcatcaCTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTT‑AACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATGCGGCGGCTCGAAAAAAGGGTAAGCACGTTATTATGTTa > 1:2114123/1‑149 (MQ=255) tcatcaCTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTT‑AACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATGCGGCGGCTCGAAAAAAGGGTAAGCACGTTATTATGTTa > 2:3435844/1‑149 (MQ=255) catcaCTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTT‑AACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATGCGGCGGCTCGAAAAAAGGGTAAGCACGTTATTATGTTaa < 1:2856180/149‑1 (MQ=255) atcaCTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTT‑AACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATGCGGCGGCTCGAAAAAAGGGTAAGCACGTTATTATGTTAAg < 2:1434300/149‑1 (MQ=255) | CGGATCGTCGGCGATAATCAGCAACGTTTCGCCAGGCTGCATATTGCGCACGGTTTTGCGCACCATCATCACCGGTTCCGGGCAGCGCAGGCCAAGCGCGTCGAGTGTGTGGTCAGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTT‑AACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATGCGGCGGCTCGAAAAAAGGGTAAGCACGTTATTATGTTAAG > CP009273/3602219‑3602514 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |