| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,603,125 | A→C | 7.9% | T300P (ACG→CCG) | yjjU → | putative patatin‑like family phospholipase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,603,125 | 0 | A | C | 7.9% | 432.6 / 3.6 | 181 | T300P (ACG→CCG) | yjjU | putative patatin‑like family phospholipase |
| Reads supporting (aligned to +/- strand): ref base A (86/74); new base C (19/2); total (105/76) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.61e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 181 total aligned reads displayed.
CAATTTATTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGC‑TTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAGGCGAACGACC > CP009273/4602978‑4603272 | ttATTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGtt < 1:1526767/149‑1 (MQ=255) ttATTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGtt < 1:3380254/149‑1 (MQ=255) tATTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTg < 1:2361392/149‑1 (MQ=255) aTTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTAGCCACGGTTgg > 2:1266748/1‑149 (MQ=255) gagaAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCaa < 2:597057/149‑1 (MQ=255) gagaAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCaa < 1:2028244/149‑1 (MQ=255) aaaCCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCt < 2:660924/149‑1 (MQ=255) aaaCCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCt < 1:3617248/149‑1 (MQ=255) aaCCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTGATTTAATAGCCACGGTTGGCAAGCTa > 2:4085630/1‑149 (MQ=255) accaccGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTGTGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTAt < 2:4134623/149‑1 (MQ=255) ccaccGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTACTCGCCACGGTTGGCAAGCGAtt > 1:4033868/1‑149 (MQ=255) ccaccGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTGGTTTTAGCGCCACCGGTGGCACGCGAtt > 1:3776865/1‑149 (MQ=255) caccGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTa < 1:2669454/149‑1 (MQ=255) accGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTaa < 2:242774/149‑1 (MQ=255) gggCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAAATg > 2:3206028/1‑149 (MQ=255) ggCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTACTCGCCACGGTTGGCAAGCTATTAACTGa > 2:4298896/1‑149 (MQ=255) aGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTCTAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCCCGGGTGGCAAGCGCTTAACTGaaaaa > 2:2080318/1‑149 (MQ=255) aGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTTTTTAAACGCCCCCGTTTGCAAGCGATTTACAGtaaaa > 1:3762969/1‑149 (MQ=255) aGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTAGCCCCGGTTGGCAAGCTATTAACTGaaaaa > 2:1383400/1‑149 (MQ=255) tGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAgcg < 1:3466470/149‑1 (MQ=255) atatTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTACACGCCACGGTTGGCAAGCTATTAAAGGAAAAAGcgccgca > 1:2178906/1‑148 (MQ=255) atTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGC‑TTa < 2:2095540/149‑1 (MQ=255) atTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTGATTTCCACGCCACGGTTGGCAAGCTATTAACAGAAAAATCGCCGC‑ATa > 2:1570989/1‑149 (MQ=255) ttCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGGTGGCAAGCTATTAACTGAAAAAGCGCCGC‑TTaa > 2:1603681/1‑148 (MQ=255) ttCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTACTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGC‑TTAc > 1:2806424/1‑149 (MQ=255) ttCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTAAAAGCCACGGTTTGCCAGCAATTAACTTAAAAACCACCGC‑ATAc > 2:2261089/1‑149 (MQ=255) gAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAACAGCGCCGC‑TTACCCg > 2:3226748/1‑149 (MQ=255) gAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTAGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGC‑TTAACCg > 2:921981/1‑149 (MQ=255) tttATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCGATTAACTGAAAAAGCGCCGC‑TTACCCGCCAt > 2:214724/1‑149 (MQ=255) ttATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGC‑TTACCCGCCATc < 2:1334501/149‑1 (MQ=255) aTCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTAAAAGCCACGGGTGGCAATCTATTAACTGAAAAAGCGCCGC‑ATACCCCCCaaaag > 1:742536/1‑145 (MQ=255) gccgAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGC‑TTACCCGCCATCTGGTGc > 2:2542402/1‑149 (MQ=255) ccgAAGCCTTTACATAGTATCGCGGTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGGGTTTTTGGGGTGGTTATTTCCTCGCCAGGGTTGGCAAGCTATTAACTCAAAAAGCGCCGC‑TTACCCGCCATCTGGTGcc < 1:865425/149‑1 (MQ=255) ccgAAGCCATTACATTGTTTCGCGAGTGGCTGTCGGATTCCGGGGCTGCGTGAAGACTATAAACTGGGGGTTTTTGGCGGTGGTTATTTCCTCGCCCCGGTTGGCAAGCTTTTAACTGAAAAAGCGCCGC‑TTACCCGCCATCTGGTGcc < 1:865442/149‑1 (MQ=255) ccgAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTTTTTACAAGCCCCCGTTGGCCAGCGATTAACAGAAAAAACGCCGC‑ATACCCCCCAACTGGTGcc > 2:770377/1‑149 (MQ=255) cgAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTGTTTTACTCGCCCCGGTTGGCAAGCGATTAACAGAAAAAGCGCCGC‑GTAACCGCCCACTGGTGGCa > 2:1126480/1‑149 (MQ=255) gAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGC‑TTAACCGCCAACTGGTGcccg > 2:4026422/1‑147 (MQ=255) aaGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCACGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGC‑TTACCCGCCATCTGGTGCCAgg > 2:3659265/1‑148 (MQ=255) aaGCCATTAAATCGTATCGCGCTTGGCTGTGGGATTCCGGCGCTGCGTGAAGAATATAAACTTGGGGGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGAAAGCTATTAACTTAAAAAGCGCCGC‑TTACCCGCCATCTGGTGCCAgt < 1:1268402/149‑1 (MQ=255) gCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGC‑TTACCCGCCATCTGGTGCCAgtgg < 2:641478/149‑1 (MQ=255) gCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTGATTTGCACGCCACCGGTGGGAAGCTATTAAAGGAAAAAGCGGCCC‑GTACCCCCCATAATGTGCCActgg > 2:4887/1‑149 (MQ=255) aTTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACCGTTGGCAAGCTATTAACTGAAAAAGCGCCGC‑TTACCCCCCATCTGGTGCCCGTGGTGa > 2:1025360/1‑149 (MQ=255) tACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTACACGCCACCGGTGGCAAGCGATTAAAAGAAAAAAACCCCC‑GTACCCCCCCACAGGTGCCCCTGGGGACg > 1:2730735/1‑149 (MQ=255) aCATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTACTCGCCACCGGTGGCAACCAATTAACAGAAAAAACGCCGC‑TTAAACCCCAACAGGTGCCACGGGTGACGc > 2:3349377/1‑149 (MQ=255) ttagtagCGCGCGTGGCAGTCGGATTCCGGCGCTGCGTTAAGAATATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTTAAAAAGCGCCGC‑TTACCCGCCATCTGGTGCCAGTGGTGACGCCg < 1:125322/148‑1 (MQ=255) gTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTACTCGCCACGGGTTGCAAGCTATTAACTGAAAAAAAGCCGC‑TTTACCGCCATATTGTTGCAGTGGTGACGCCGGaa > 1:1017632/1‑149 (MQ=255) tATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTGATTTACTCGCCACGGTTGGCAAGCGATTAACAGAAAAAGCGCCGC‑TTACCCGCCAACTGGGGCCAGGGGTGACGCCGGAAt > 2:3868211/1‑149 (MQ=255) tCGCGCTTGGCTGTGGGAGTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGGGGTCGTTTTTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGC‑TTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCg < 2:137981/149‑1 (MQ=255) tCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTTTTTACACGCCACCGGTGGCAAGCTATTAAAAGAAAAAAAGCCCC‑TTTCCCGCCAACTTGTTCAACTGGTTTAGCCGGaaaag > 1:304707/1‑146 (MQ=255) tCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTACACGCCCCCGTTGGGAAGCGAATAAATGAAAAAACGCCCC‑ATACCCCCCAACAGGTTCCAGAGGTGACGCCCGAATCg > 1:304253/1‑149 (MQ=255) tCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTGTTTTGCTCGCCCCCGGTGGCAAGCTAATAAAATAAAAAACCCCCC‑GTACCCCCCCAAAGGGGCCCGGGGTGTCGCCGGCATCg > 1:599269/1‑149 (MQ=255) tCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTGTTTTGCTAGCCCCCGTTGGCCAGCTAATAACAGAAAAAACGCCGC‑GTACCCCCCCACAGGTGGCACGGGGGTCGCCGGCAtac > 1:599373/1‑147 (MQ=255) cgcTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGC‑TTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGAtt < 1:2501103/149‑1 (MQ=255) ttGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTTTTTACGCGCCCCGGTTGGGAAGCGATTAACTGTAAAATCGCCCC‑GTAACCCCCAAATGGTTGCAGGGGTGAAGCCCGAATCGCtttta > 1:2378652/1‑146 (MQ=255) tGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTTCTAGCCACCGTTTGCCAGCTATTTACAGAAAAAGCCCCGC‑GTTACCGCCCAATGGGGCCCGTGGTGACGCCCGAATCGAttttga > 1:1287995/1‑145 (MQ=255) tGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTACTCGCCACGGGTGGGAAGCTATTAACTGAAAAATCGCCGC‑TTTCCCGCCCTCTGGTGCCACTGGTGACGCCGGAATCGATTGtaa > 2:3452031/1‑147 (MQ=255) gTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCGCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGC‑TTAACCCCCAACTGGTGCCAGTGGTGAAGCCGGAATCGATTGTCATTACg > 1:2940403/1‑149 (MQ=255) ggATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGC‑TTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCt < 2:1226148/149‑1 (MQ=255) gATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTACTCGCCCCGGTTTGCAAGCTATTAAATGAAAAAGCGCCCCATTACCC‑CCATCTGGTGGCAGAGGTGAAGCCGGAATAGAATGTAATTACGccag > 1:4382243/1‑147 (MQ=255) gATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTGTTTTCCTCGCCCCCGGTTGCAAGCGATTAACTGAAAAAGCGCCGC‑GTACCCGCCCACAGGTGGCCGGGGTGGCGCCGGACTCGATTGTCAttaccccgg > 1:4036599/1‑142 (MQ=255) ccGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGC‑TTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGcc < 1:2870527/149‑1 (MQ=255) cgcTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGC‑TTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTc < 2:1721519/149‑1 (MQ=255) cgcTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGC‑TTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTc < 1:4397958/149‑1 (MQ=255) cgcTGCGTGAAGAATATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGC‑TTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTc < 1:4397875/149‑1 (MQ=255) gcTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTAGCCACCGTTTGCAAGCTATTAACTGAAAAATCGCCGC‑TTAAACGCCATCTGGGGCCCGTGGTGTCGCCGGAATAGATTGTGATTACGCCAGCGCCAGTCg > 2:174741/1‑149 (MQ=255) tGAAGACTATAAACTTGGGCGTTTATGCGGTCGTGATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAATCGCCGC‑TTACCCCCCATCGGGTGCCCGTGGTGACGCCGGAATCGATTGTCAATACGCCTGCGCCAGTCCCCAACg > 2:3944070/1‑149 (MQ=255) aaGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACCGTTGGCAAGCGATTAACAGAAAAACCGCCGC‑TTACCCCCCCACAGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCACTCCCCAACCAt > 2:3542367/1‑149 (MQ=255) aGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACAGAAAAAGCGCCGC‑TTACCCCCCATATGGTGCCAGTGTTGACGCCGGAATCGATTTTCATTACGCCTCCGCCAGTCGCCAACGATa > 2:1714419/1‑149 (MQ=255) gACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGC‑TTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATAc < 1:3281922/149‑1 (MQ=255) aCTTGGGCGTTTATGCGGTCGTTTTTTGCTCGCCACGGTTGGCAAGCTATTAAATGAAAAATCGCCGC‑TTAACCGCCATATGGTGGCAGTGGTGACGCCGGAATAGATTGTAATTACGCCTTCGCCAGTCGCCAACGATACGCTGGttt > 2:4335920/1‑148 (MQ=255) aCTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGC‑TTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTg < 2:2601966/149‑1 (MQ=255) aCTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGC‑TTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTg < 2:1888840/149‑1 (MQ=255) cTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTTGCAAGCTATTAACAGAAAAAGCGCCGC‑GTACCCCCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCCCCAGCGCCAGTCGCCAACGATACGCTGGTTGc > 2:314014/1‑149 (MQ=255) ttGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGC‑TTACCCGCCATCTGGTGCCACTGGTGACGCCGGAATCGATTGTCATTACGCCAGCGCCCGTCGCCCACCATACGCAGGTTTcc > 2:2411141/1‑149 (MQ=255) tGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGC‑TTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTTTAATTACGCCAGCGCCAGTCGCCAACGATAAGCTGGTTGCCg > 2:722642/1‑149 (MQ=255) tGGGCGTTTATGCGGTCGTTATTTCCACGCCACGGTTGGCAAGCGATTAACTGACAAAGCGCCGC‑TTACCCGCCAACGGGTGCCAGTGGTGACGCCGGAATCCATTGTCATTACGCCAGCGCCAGTCGCCAACGATACGCTGGTTTCCg > 2:1355193/1‑149 (MQ=255) gggCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCAATTAAAAGAAAAATCGCCGC‑TTACCCCCCAACGGGTGCCAGTGGTGACGCCGGAAAAGATTTTCATTACGCCTGCGCCAGTCGCCAACCATACGCTGGTTGGCGa > 2:153591/1‑149 (MQ=255) cttttATGCGGTCGTTATTGCCTCGCCAGGTTGGGAAAGCTTTTAACTGAAAAAGCGCCGC‑TTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGt < 1:4124503/147‑1 (MQ=255) gTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGC‑TTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTg < 2:827639/149‑1 (MQ=255) tttATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAAATGAAAAAGCGCCGC‑TTACCCCCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTAAATACGCCTGCGCCAGTCGCCAACGATACCCTGGTTGCCGAAGTgt > 2:2522168/1‑148 (MQ=255) ttATGCGGTCTTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGC‑TTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAg < 1:1685518/149‑1 (MQ=255) tGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGC‑TTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGa < 1:1739553/149‑1 (MQ=255) tGCGGTCGTGATTTACTCGCCACGGTTGGCAAGCTATTAACTGAAAAATCGCCGC‑TTACCCCCCAACTGGTGCCCGTGGTGACGCCGGAATCGATTTTCATTCCGCCTGCGCCAGTCGCCCACGATACGCTGGTTGCCGGAGTGAGCGa > 2:1788768/1‑149 (MQ=255) cGTTAGTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGC‑TTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTcc < 2:3773756/149‑1 (MQ=255) ttATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGC‑TTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGc > 1:3039865/1‑149 (MQ=255) tATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGC‑TTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCa < 2:4190742/149‑1 (MQ=255) aTTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGC‑TTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAg < 2:2992018/149‑1 (MQ=255) tttCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGC‑TTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAgg > 2:3338010/1‑149 (MQ=255) tttCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGC‑TTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAgg > 1:1977418/1‑149 (MQ=255) cTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGC‑TTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAGGCGaa > 1:4100540/1‑149 (MQ=255) cTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGC‑TTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAGGCGaa > 1:4100443/1‑149 (MQ=255) cTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGC‑TTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAGGCGaa < 2:2688463/149‑1 (MQ=255) cTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGC‑TTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAGGCGaa < 2:2501335/149‑1 (MQ=255) tCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGC‑TTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAGGCGAAc > 1:4141562/1‑149 (MQ=255) cGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGC‑TTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAGGCGAACg < 1:2501156/149‑1 (MQ=255) gCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGC‑TTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAGGCGAACGa > 2:1711755/1‑149 (MQ=255) ccACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGC‑TTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAGGCGAACGAc > 2:3219071/1‑149 (MQ=255) ccACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGC‑TTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAGGCGAACGAc > 1:4024525/1‑149 (MQ=255) cACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGC‑TTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAGGCGAACGAcc > 2:2841127/1‑149 (MQ=255) cACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGC‑TTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTAGCCGAAGTGAGCGACGCTCCGCAGGCGAACGAcc > 2:318656/1‑149 (MQ=255) | CAATTTATTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGC‑TTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAGGCGAACGACC > CP009273/4602978‑4603272 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |