Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 599,256 C→T 5.4% A288A (GCG→GCA ybdG ← mechanosensitive channel protein, miniconductance

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP009273599,2560CT 5.4% 1278.7 / 38.7 350A288A (GCG→GCAybdGmechanosensitive channel protein, miniconductance
Reads supporting (aligned to +/- strand):  ref base C (168/162);  new base T (10/9);  total (178/172)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.92e-01

Only 100 of 362 total aligned reads displayed.

GGTTACGCAGATATTCGTTCAGATAGGCACGAAAGGTTCCAATATTGGTCATTCGGCGCAGATTTAATACCGACTCCGTAGAACCTTGCTGGCGATTCCACTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGCGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGAAAACGAATACTGGTGACATCAATACTGATACTGCGCTTAATACGTCGCCCGCCAGATGCTGACATCCCGCTCCAGTTTTTAAAGGAGTCAGAAACCAGAGACCAGGTGGGAA  >  CP009273/599108‑599404
                                                                                                                                                    |                                                                                                                                                    
ggTTACGCAGATATTCGTTCAGATAGGCACGAAAGGTTCCAATATTGGTCATTCGGCGCAGATTTAATACCGACTCCGTAGAACCTTGCTGGCGATTCCACTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATgc                                                                                                                                                      >  2:2998447/1‑149 (MQ=255)
ggTTACGCAGATATTCGTTCAGATAGGCACGAAAGGTTCCAATATTGGTCATTCGGCGCAGATTTAATACCGACTCCGTAGAACCTTGCTGGCGATTCCACTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATgc                                                                                                                                                      >  2:2407296/1‑149 (MQ=255)
   tACGCAGATATTCGTTCAGATAGGCACGAAAGGTTCCAATATTGGTCATTCGGCGCAGATTTAATACCGACTCCGTAGAACCTTGCTGGCGATTCCACTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGCGCt                                                                                                                                                   >  1:2959527/1‑149 (MQ=255)
    aCGCAGATATTCGTTCAGATAGGCACGAAAGGTTCCAATATTGGTCATTCGGCGCAGATTTAATACCGACTCCGTAGAACCTTGCTGGCGATTCCACTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGCGCtt                                                                                                                                                  <  2:1165581/149‑1 (MQ=255)
     cGCAGATATTCGTTCAGATAGGCACGAAAGGTTCCAATATTGGTCATTCGGCGCAGATTTAATACCGACTCCGTAGAACCTTGCTGGCGATTCCACTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGCGCttt                                                                                                                                                 <  1:2729433/149‑1 (MQ=255)
      gCAGATATTCGTTCAGATAGGCACGAAAGGTTCCAATATTGGTCATTCGGCGCAGATTTAATACCGACTCCGTAGAACCTTGCTGGCGATTCCACTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGCGCTTTa                                                                                                                                                <  2:3559841/149‑1 (MQ=255)
        aGATATTCGTTCAGATAGGCACGAAAGGTTCCAATATTGGTCATTCGGCGCAGATTTAATACCGACTCCGTAGAACCTTGCTGGCGATTCCACTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGCGCTTTAtt                                                                                                                                              >  1:5151862/1‑149 (MQ=255)
        aGATATTCGTTCAGATAGGCACGAAAGGTTCCAATATTGGTCATTCGGCGCAGATTTAATACCGACTCCGTAGAACCTTGCTGGCGATTCCACTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGCGCTTTAtt                                                                                                                                              >  2:1646823/1‑149 (MQ=255)
         gATATTCGTTCAGATAGGCACGAAAGGTTCCAATATTGGTCATTCGGCGCAGATTTAATACCGACTCCGTAGAACCTTGCTGGCGATTCCACTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGCGCTTTATTc                                                                                                                                             >  2:5126026/1‑149 (MQ=255)
              tCGTTCAGATAGGCACGAAAGGTTCCAATATTGGTCATTCGGCGCAGATTTAATACCGACTCCGTAGAACCTTGCTGGCGATTCCACTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGCGCTTTATTCAGACg                                                                                                                                        >  1:2447622/1‑149 (MQ=255)
                 ttCAGATAGGCACGAAAGGTTCCAATATTGGTCATTCGGCGCAGATTTAATACCGACTCCGTAGAACCTTGCTGGCGATTCCACTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGCGCTTTATTCAGACGTTg                                                                                                                                     >  2:3679454/1‑149 (MQ=255)
                  tCAGATAGGCACGAAAGGTTCCAATATTGGTCATTCGGCGCAGATTTAATACCGACTCCGTAGAACCTTGCTGGCGATTCCACTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGCGCTTTATTCAGACGTTGc                                                                                                                                    <  1:900208/149‑1 (MQ=255)
                    aGATAGGCACGAAAGGTTCCAATATTGGTCATTCGGCGCAGATTTAATACCGACTCCGTAGAACCTTGCTGGCGATTCCACTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGCGCTTTATTCAGACGTTGCAt                                                                                                                                  <  2:296368/149‑1 (MQ=255)
                     gATAGGCACGAAAGGTTCCAATATTGGTCATTCGGCGCAGATTTAATACCGACTCCGTAGAACCTTGCTGGCGATTCCACTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGCGCTTTATTCAGACGTTGCAtt                                                                                                                                 <  2:3828079/149‑1 (MQ=255)
                     gATAGGCACGAAAGGTTCCAATATTGGTCATTCGGCGCAGATTTAATACCGACTCCGTAGAACCTTGCTGGCGATTCCACTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGCGCTTTATTCAGACGTTGCAtt                                                                                                                                 <  2:2153811/149‑1 (MQ=255)
                       tAGGCACGAAAGGTTCCAATATTGGTCATTCGGCGCAGATTTAATACCGACTCCGTAGAACCTTGCTGGCGATTCCACTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGCGCTTTATTCAGACGTTGCATTTc                                                                                                                               >  1:3729523/1‑149 (MQ=255)
                           cACGAAAGGTTCCAATATTGGTCATTCGGCGCAGATTTAATACCGACTCCGTAGAACCTTGCTGGCGATTCCACTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGCGCTTTATTCAGACGTTGCATTTCGTCt                                                                                                                           >  2:4147340/1‑149 (MQ=255)
                             cGAAAGGTTCCAATATTGGTCATTCGGCGCAGATTTAATACCGACTCCGTAGAACCTTGCTGGCGATTCCACTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGCGCTTTATTCAGACGTTGCATTTCGTCTtc                                                                                                                         >  2:1291523/1‑149 (MQ=255)
                               aaaGGTTCCAATATTGGTCATTCGGCGCAGATTTAATACCGACTCCGTAGAACCTTGCTGGCGATTCCACTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGCGCTTTATTCAGACGTTGCATTTCGTCTtcat                                                                                                                       >  2:1475287/1‑149 (MQ=255)
                                 aGGTTCCAATATTGGTCATTCGGCGCAGATTTAATACCGACTCCGTAGAACCTTGCTGGCGATTCCACTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGCGCTTTATTCAGACGTTGCATTTCGTCTtcatca                                                                                                                     >  2:3481482/1‑149 (MQ=255)
                                 aGGTTCCAATATTGGTCATTCGGCGCAGATTTAATACCGACTCCGTAGAACCTTGCTGGCGATTCCACTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGCGCTTTATTCAGACGTTGCATTTCGTCTtcatca                                                                                                                     >  1:777081/1‑149 (MQ=255)
                                  ggTTCCAATATTGGTCATTCGGCGCAGATTTAATACCGACTCCGTAGAACCTTGCTGGCGATTCCACTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGCGCTTTATTCAGACGTTGCATTTCGTCTTCATCaa                                                                                                                    >  1:3687544/1‑149 (MQ=255)
                                      ccAATATTGGTCATTCGGCGCAGATTTAATACCGACTCCGTAGAACCTTGCTGGCGATTCCACTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGCGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGaaa                                                                                                                <  1:4902907/149‑1 (MQ=255)
                                       cAATATTGGTCATTCGGCGCAGATTTAATACCGACTCCGTAGAACCTTGCTGGCGATTCCACTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGCGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGaaaa                                                                                                               <  1:222045/149‑1 (MQ=255)
                                        aaTATTGGTCATTCGGCGCAGATTTAATACCGACTCCGTAGAACCTTGCTGGCGATTCCACTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGCGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGAAAAc                                                                                                              >  2:3516718/1‑149 (MQ=255)
                                         atatTGGTCATTCGGCGCAGATTTAATACCGACTCCGTAGAACCTTGCTGGCGATTCCACTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGCGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGAAAACg                                                                                                             >  1:1949756/1‑149 (MQ=255)
                                          tatTGGTCATTCGGCGCAGATTTAATACCGACTCCGTAGAACCTTGCTGGCGATTCCACTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGCGCTTTATTCAGACGTTGCATATCGTCTTCATCAAGAAAACGa                                                                                                            >  2:2252879/1‑149 (MQ=255)
                                           atTGGTCATTCGGCGCAGATTTAATACCGACTCCGTAGAACCTTGCTGGCGATTCCACTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGCGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGAAAACGaa                                                                                                           <  2:3332473/149‑1 (MQ=255)
                                           atTGGTCATTCGGCGCAGATTTAATACCGACTCCGTAGAACCTTGCTGGCGATTCCACTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGCGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGAAAACGaa                                                                                                           >  1:4342818/1‑149 (MQ=255)
                                           atTGGTCATTCGGCGCAGATTTAATACCGACTCCGTAGAACCTTGCTGGCGATTCCACTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGCGCTTTATTAAGACGTTGCATTTCGTCTTCATCAAGAAAACGaa                                                                                                           >  1:455619/1‑149 (MQ=255)
                                              ggTCAGTCGGCGCAGATTTAATACCGACTCCGTAGAACCTTGCTGGCGATTCCACTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGCGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGAAAACGAATAc                                                                                                        <  2:4799544/149‑1 (MQ=255)
                                                    tCGGCGCAGATTTAATACCGACTCCGTAGAACCTTGCTGGCGATTCCACTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGCGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGAAAACGAATACTGGTGa                                                                                                  <  1:679115/149‑1 (MQ=255)
                                                     cGGCGCAGATTTAATACCGACTCCGTAGAACCTTGCTGGCGATTCCACTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGCGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGAAAACGAATACTGGTGAc                                                                                                 <  2:4744399/149‑1 (MQ=255)
                                                      ggCGCAGATTTAATACCGACTCCGTAGAACCTTGCTGGCGATTCCACTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGCGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGAAAACGAATACTGGTGAcc                                                                                                <  1:1213269/149‑2 (MQ=255)
                                                          cAGATTTAATACCGACTCCGTAGAACATTGCTGTCGATTCCACTCATTAATTTCCTGATGGCGGCTGGTTAAATAATGCTTTAACAAATGCGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGAAAACGAATACTGGTGACATCaa                                                                                            <  1:436195/149‑1 (MQ=255)
                                                           aGATTTAATCCCGACTCCGTAGAACCTTGCTGGCGATTCCACTCATTAATGTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGCGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGAAAACGAATACTGGTGACATCAat                                                                                           <  1:1310152/149‑1 (MQ=255)
                                                           aGATTTAATACCGACTCCGTAGAACCTTGCTGGCGATTCCACTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGCGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGAAAACGAATACTGGTGACATCAat                                                                                           <  2:95379/149‑1 (MQ=255)
                                                             aTTTAATACCGACTCCGTAGAACCTTGCTGGCGATTCCACTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGCGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGAAAACGAATACTGGTGACATCAatac                                                                                         <  2:635306/149‑1 (MQ=255)
                                                             aTTTAATACCGACTCCGTAGAACCTTGCTGGCGATTCCACTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGCGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGAAAACGAATACTGGTGACATCAatac                                                                                         <  1:1074927/149‑1 (MQ=255)
                                                                   tACCGACTCCGTAGAACCTTGCTGGCGATTCCACTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGCGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGAAAACGAATACTGGTGACATCAatactgatac                                                                                   >  1:5094447/1‑149 (MQ=255)
                                                                    gataaCTCCGTAGAACCTTGCTGGCGATTCCACTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGCGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGAAAACGAATACTGGTGACATCAatactgatact                                                                                  <  2:698053/145‑1 (MQ=255)
                                                                         cTCCGTAGAACCTTGCTGGCGATTCCACTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGCGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGAAAACGAATACTGGTGACATCAATACTGATACTGCGCt                                                                             <  2:5200940/149‑1 (MQ=255)
                                                                         cTCCGTAGAACCTTGCTGGCGATTCCACTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGCGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGAAAACGAATACTGGTGACATCAATACTGATACTGCGCt                                                                             <  2:4091725/149‑1 (MQ=255)
                                                                         cTCCGTAGAACCTTGCTGGCGATTCCACTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGCGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGAAAACGAATACTGGTGACATCAATACTGATACTGCGCt                                                                             >  1:126714/1‑149 (MQ=255)
                                                                         cTCCGTAGAACCTTGCTGGCGATTCCACTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGCGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGAAAACGAATACTGGTGACATCAATACTGATACTGCGCt                                                                             >  1:2264804/1‑149 (MQ=255)
                                                                           ccGTAGAACCTTGCTGGCGATTCCACTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGCGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGAAAACGAATACTGGTGACATCAATACTGATACTGCGCTTa                                                                           <  2:2462018/149‑1 (MQ=255)
                                                                             gTAGAACCTTGCTGGCGATTCCACTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGCGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGAAAACGAATACTGGTGACATCAATACTGATACTGCGCTTAAt                                                                         >  1:2336498/1‑149 (MQ=255)
                                                                              tAGAACCTTGCTGGCGATTCCACTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGCGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGAAAACGAATACTGGTGACATCAATACTGATACTGCGCTTAATa                                                                        <  1:352935/149‑1 (MQ=255)
                                                                                 aaCCTTGCTGGCGATTCCACTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGCGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGAAAACGAATACTGGTGACATCAATACTGATACTGCGCTTAATACGt                                                                     >  2:4538138/1‑149 (MQ=255)
                                                                                  aCCTTGCTGGCGATTCCACTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGCGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGAAAACGAATACTGGTGACATCAATACTGATACTGCGCTTAATACGTc                                                                    >  2:1556183/1‑149 (MQ=255)
                                                                                  aCCTTGCTGGCGATTCCACTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGCGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGAAAACGAATACTGGTGACATCAATACTGATACTGCGCTTAATACGTc                                                                    >  2:4961169/1‑149 (MQ=255)
                                                                                    cTTGCTGGCGATTCCTCTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGCGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGAAAACGAATACTGGTGACATCAATACTGATACTGCGCTTAATACGTcgc                                                                  <  1:218199/149‑1 (MQ=255)
                                                                                    cTTGCTGGCGATTCCACTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGTGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGAAAACGAATACTGGTGACATCAATACTGATACTGCGCTTAATACGTcgc                                                                  <  1:4115193/149‑1 (MQ=255)
                                                                                     ttGCTGGCGATTCCACTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGCGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGAAAACGAATACTGGTGACATCAATACTGATACTGCGCTTAATACGTcgcc                                                                 >  2:2432630/1‑149 (MQ=255)
                                                                                        cTGGCGATTCCACTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGCGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGAAAACGAATACTGGTGACATCAATACTGATACTGCGCTTAATACGTcgcccgc                                                              <  1:2388110/149‑1 (MQ=255)
                                                                                          ggCGATTCCACTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGCGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGAAAACGAATACTGGTGACATCAATACTGATACTGCGCTTAATACGTCGCCCGCCa                                                            >  1:2829831/1‑149 (MQ=255)
                                                                                            cGATTCCACTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGCGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGAAAACGAATACTGGTGACATCAATACTGATACTGCGCTTAATACGTCGCCCGCCAGa                                                          <  2:4579788/149‑1 (MQ=255)
                                                                                            cGATTCCACTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGCGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGAAAACGAATACTGGTGACATCAATACTGATACTGCGCTTAATACGTCGCCCGCCAGa                                                          <  2:1985789/149‑1 (MQ=255)
                                                                                             gATTCCACTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGCGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGAAAACGAATACTGGTGACATCAATACTGATACTGCGCTTAATACGTCGCCCGCCAGAt                                                         >  1:4823337/1‑149 (MQ=255)
                                                                                             gATTCCACTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGCGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGAAAACGAATACTGGTGACATCAATACTGATACTGCGCTTAATACGTCGCCCGCCAGAt                                                         >  2:3631439/1‑149 (MQ=255)
                                                                                                  cACTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGCGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGAAAACGAATACTGGTGACATCAATACTGATACTGCGCTTAATACGTCGCCCGCCAGATGCTGa                                                    <  2:1504937/149‑1 (MQ=255)
                                                                                                  cACTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGCGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGAAAACGAATACTGGTGACATCAATACTGATACTGCGCTTAATACGTCGCCCGCCAGATGCTGa                                                    <  2:1914792/149‑1 (MQ=255)
                                                                                                  cACTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGCGCTTTATTCAGACGGTGCATTTCGTCTTCATCAAGAAAACGAATACTGGTGACATCAATACTGATACTGCGCTTAATACGTCGCCCGCCAGATGCTGa                                                    <  2:1196244/149‑1 (MQ=255)
                                                                                                     tCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGCGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGAAAACGAATACTGGTGACATCAATACTGATACTGCGCTTAATACGTCGCCCGCCAGATGCTGACAt                                                 >  1:827160/1‑149 (MQ=255)
                                                                                                       aTTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGCGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGAAAACGAATACTGGTGACATCAATACTGATACTGCGCTTAATACGTCGCCCGCCAGATGCTGACATcc                                               <  1:4538138/149‑1 (MQ=255)
                                                                                                       aTTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGCGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGAAAACGAATACTGGTGACATCAATACTGATACTGCGCTTAATACGTCGCCCGCCAGATGCTGACATcc                                               >  2:1090682/1‑149 (MQ=255)
                                                                                                          aaTTTCCTGATGGCGGCTGGTTAACTAAGGCTTTAACAAATGCGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGAAAACGAATACTGGTGACATCAATACTGATACTGCGCTTAATACGTCGCCCGCCAGATGCTGACATCCCGc                                            <  1:2291793/149‑1 (MQ=255)
                                                                                                             ttCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGCGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGAAAACGAATACTGGTGACATCAATACTGATACTGCGCTTAATACGTCGCCCGCCAGATGCTGACATCCCGCTcc                                         >  1:567388/1‑149 (MQ=255)
                                                                                                               ccTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGCGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGAAAACGAATACTGGTGACATCAATACTGATACTGCGCTTAATACGTCGCCCGCCAGATGCTGACATCCCGCTCCAg                                       >  2:175151/1‑149 (MQ=255)
                                                                                                                 tGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGCGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGAAAACGAATACTGGTGACATCAATACTGATACTGCGCTTAATACGTCGCCCGCCAGATGCTGACATCCCGCTCCAGtt                                     >  1:1456498/1‑149 (MQ=255)
                                                                                                                    tGGCGGCTGGTTAAATAAGGCTTTAACAAATGCGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGAAAACGAATACTGGTGACATCAATACTGATACTGCGCTTAATACGTCGCCCGCCAGATGCTGACATCCCGCTCCAGttttt                                  >  2:2898591/1‑149 (MQ=255)
                                                                                                                     ggcggcTGGTTAAATAAGGCTTTAACAAATGCGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGAAAACGAATACTGGTGACATCAATACTGATACTGCGCTTAATACGTCGCCCGCCAGATGCTGACATCCCGCTCCAGTTTTTa                                 >  1:981935/1‑149 (MQ=255)
                                                                                                                       cggcTGGTTAACTAAGGCTTTAACAAATGCGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGAAAACGAATACTGGTGACATCAATACTGATACTGCGCTTAATACGTCGCCCGCCAGATGCTGACATCCCGCTCCAGTTTTTaaa                               <  2:4336038/149‑1 (MQ=255)
                                                                                                                        ggcTGGTTAAATAAGGCTTTAACAAATGCGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGAAAACGAATACTGGTGACATCAATACTGATACTGCGCTTAATACGTCGCCCGCCAGATGCTGACATCCCGCTCCAGTTTTTAAAg                              >  2:1772458/1‑149 (MQ=255)
                                                                                                                           tGGTTAAATAAGGCTTTAACAAATGCGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGAAAACGAATACTGGTGACATCAATACTGATACTGCGCTTAATACGTCGCCCGCCAGATGCTGACATCCCGCTCCAGTTTTTAAAGGAg                           >  1:1545103/1‑149 (MQ=255)
                                                                                                                            ggTTAAATAAGGCTTTAACAAATGCGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGAAAACGAATACTGGTGACATCAATACTGATACTGCTCTTAATACGTCGCCCGCCAGATGCTGACATCCCGCTCCAGTATTTAAAGGAGt                          >  1:2579700/1‑149 (MQ=255)
                                                                                                                             gTTAAATAAGGCTTTAACAAATGCGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGAAAACGAATACTGGTGACATCAATACTGATACTGCGCTTAATACGTCGCCCGCCAGATGCTGACATCCCGCTCCAGTTTTTAAAGGAGTc                         >  1:3169729/1‑149 (MQ=255)
                                                                                                                               tAAATAAGGCTTTAACAAATGCGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGAAAACGAATACTGGTGACATCAATACTGATACTGCGCTTAATACGTCGCCCGCCAGATGCTGACATCCCGCTCCAGTTTTTAAAGGAGTCAg                       <  1:3854638/149‑1 (MQ=255)
                                                                                                                                aaaTAAGGCTTTAACAAATGCGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGAAAACGAATACTGGTGACATCAATACTGATACTGCGCTTAATACGTCGCCCGCCAGATGCTGACATCCCGCTCCAGTTTTTAAAGGAGTCAGa                      >  2:3274974/1‑149 (MQ=255)
                                                                                                                                  aTAAGGCTTTAACAAATGCGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGAAAACGAATACTGGTGACATCAAGACTGATACTGCGCTTAATACGTCGCCCGCCAGATGCTGACATCCCGCTCCAGTTTTTAAAGGAGTCAGaaa                    <  2:2119862/149‑1 (MQ=255)
                                                                                                                                   tAAGGCTTTAACAAATGCGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGAAAACGAATACTGGTGACATCAATACTGATACTGCGCTTAATACGTCGCCCGCCAGATGCTGACATCCCGCTCCAGTTTTTAAAGGAGTCAGAAAc                   >  2:306878/1‑149 (MQ=255)
                                                                                                                                   tAAGGCTTTAACAAATGCGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGAAAACGAATACTGGTGACATCAATACTGATACTGCGCTTAATACGTCGCCCGCCAGATGCTGACATCCCGCTCCAGTTTTTAAAGGAGTCAGAAAc                   >  1:1756695/1‑149 (MQ=255)
                                                                                                                                    aaGGCTTTAACAAATGCGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGAAAACGAATACTGGTGACATCAATACTGATACTGCGCTTAATACGTCGCCCGCCAGATGCTGACATCCCGCTCCAGTTTTTAAAGGAGTCAGAAAcc                  >  1:1478433/1‑149 (MQ=255)
                                                                                                                                    aaGGCTTTAACAAATGCGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGAAAACGAATACTGGTGACATCAATACTGATACTGCGCTTAATACGTCGCCCGCCAGATGCTGACATCCCGCTCCAGTTTTTAAAGGAGTCAGAAAcc                  >  1:4946901/1‑149 (MQ=255)
                                                                                                                                    aaGGCTTTAACAAATGCGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGAAAACGAATACTGGTGACATCAATACTGATACTGCGCTTAATACGTCGCCCGCCAGATGCTGACATCCCGCTCCAGTTTTTAAAGGAGTCAGAAAcc                  <  1:4198957/149‑1 (MQ=255)
                                                                                                                                    aaGGCTTTAACAAATGCGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGAAAACGAATACTGGTGACATCAATACTGATACTGCGCTTAATACGTCGCCCGCCAGATGCTGACATCCCGCTCCAGTTTTTAAAGGAGTCAGAAAcc                  >  1:3458526/1‑149 (MQ=255)
                                                                                                                                     aGGCTTTAACAAATGTGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGAAAACGAATACTGGTGACATCAATACTGATACTGCGCTTAATACGTCGCCCGCCAGATGCTGACATCCCGCTCCAGTTTTTAAAGGAGTCAGAAACCa                 >  1:111491/1‑149 (MQ=255)
                                                                                                                                       tcTTTAACAAATGCGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGAAAACGAATACTGGTGACATCAATACTGATACTGCGCTTAATACGTCGCCCGCCAGATGCTGACATCCCGCTCCAGTTTTTAAAGGAGTCAGAAACCaga               >  1:351283/2‑149 (MQ=255)
                                                                                                                                       gCTTTAACAAATGCGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGAAAACGAATACTGGTGACATCAATACTGATACTGCGCTTAATACGTCGCCCGCCAGATGCTGACATCCCGCTCCAGTTTTTAAAGGAGTCAGAAACCaga               <  2:827160/149‑1 (MQ=255)
                                                                                                                                         tttAACAAATGCGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGAAAACGAATACTGGTGACATCAATACTGATACTGCGCTTAATACGTCGCCCGCCAGATGCTGACATCCCGCTCCAGTTTTTAAAGGAGTCAGAAACCAgaga             >  1:3425798/1‑149 (MQ=255)
                                                                                                                                         tttAACAAATGCGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGAAAACGAATACTGGTGACATCAATACTGATACTGCGCTTAATACGTCGCCCGCCAGATGCTGACATCCCGCTCCAGTTTTTAAAGGAGTCAGAAACCAgaga             >  1:928172/1‑149 (MQ=255)
                                                                                                                                          ttAACAAATGCGCTATATTCAGACGTTGCATTTCGTCTTCATCAAGAAAACGAATACTGGTGACATCAATACTGATACTGCGCTTAATACGTCGCCCGCCAGATGCTGACATCCCGCTCCAGTTTTTAAAGGAGTCAGAAACCAGAGAc            <  2:1398825/149‑1 (MQ=255)
                                                                                                                                           tAACAAATGCGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGAAAACGAATACTGGTGACATCAATACTGATACTGCGCTTAATACGTCGCCCGCCAGATGCTGACATCCCGCTCCAGTTTTTAAAGGAGTCAGAAACCAGAGAcc           <  1:3558380/149‑1 (MQ=255)
                                                                                                                                           tAACAAATGCGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGAAAACGAATACTGGTGACATCAATACTGATACTGCGCTTAATACGTCGCCCGCCAGATGCTGACATCCCGCTCCAGTTTTTAAAGGAGTCAGAAACCAGAGAcc           <  2:399645/149‑1 (MQ=255)
                                                                                                                                             aCAAATGCGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGAAAACGAATACTGGTGACATCAATACTGATACTGCGCTTAATACGTCGCCCGCCAGATGCTGACATCCCGCTCCAGTTTTTAAAGGAGTCAGAAACCAGAGACCAg         >  1:2094933/1‑149 (MQ=255)
                                                                                                                                              cAAATGCGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGAAAACGAATACTGGTGACATCAATACTGATACTGCGCTTAATACGTCGCCCGCCAGATGCTGACATCCCGCTCCAGTTTTTAAAGGAGTCAGAAACCAGAGACCAgg        >  2:1865890/1‑149 (MQ=255)
                                                                                                                                               aaaTGTGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGAAAACGAATACTGGTGACATCAATACTGATACTGCGCTTAATACGTCGCCCGCCAGATGCTGACATCCCGCTCCAGTTTTTAAAGGAGTCAGAAACCAGAGACCAGGt       >  1:1884895/1‑149 (MQ=255)
                                                                                                                                                 aTGCGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGAAAACGAATACTGGTGACATCAATACTGATACTGCGCTTAATACGTCGCCCGCCAGATGCTGACATCCCGCTCCAGTTTTTAAAGGAGTCAGAAACCAGAGACCAGGTgg     >  2:2663119/1‑149 (MQ=255)
                                                                                                                                                  tGCGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGAAAACGAATACTGGTGACATCAATACTGATACTGCGCTTAATACGTCGCCCGCCAGATGCTGACATCCCGCTCCAGTTTTTAAAGGAGTCAGAAACCAGAGACCAGGTggg    >  2:4452853/1‑149 (MQ=255)
                                                                                                                                                    cgcTTTATTCAGACGTTGCATTTCGTCTTCATCAAGAAAACGAATACTGGTGACATCAATACTGATACTGCGCTTAATACGTCGCCCGCCAGATGCTGACATCCCGCTCCAGTTTTTAAAGGAGTCAGAAACCAGAGACCAGGTGGGaa  <  1:4759430/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
GGTTACGCAGATATTCGTTCAGATAGGCACGAAAGGTTCCAATATTGGTCATTCGGCGCAGATTTAATACCGACTCCGTAGAACCTTGCTGGCGATTCCACTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGCGCTTTATTCAGACGTTGCATTTCGTCTTCATCAAGAAAACGAATACTGGTGACATCAATACTGATACTGCGCTTAATACGTCGCCCGCCAGATGCTGACATCCCGCTCCAGTTTTTAAAGGAGTCAGAAACCAGAGACCAGGTGGGAA  >  CP009273/599108‑599404

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: