| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 789,274 | G→T | 8.0% | intergenic (‑30/+38) | modF ← / ← modE | fused molybdate transporter subunits of ABC superfamily: ATP‑binding components/transcriptional repressor for the molybdenum transport operon modABC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 789,274 | 0 | G | T | 8.0% | 1195.6 / 54.4 | 313 | intergenic (‑30/+38) | modF/modE | fused molybdate transporter subunits of ABC superfamily: ATP‑binding components/transcriptional repressor for the molybdenum transport operon modABC |
| Reads supporting (aligned to +/- strand): ref base G (138/150); new base T (12/13); total (150/163) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.91e-01 | |||||||||||
Only 100 of 314 total aligned reads displayed.
TTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGCTGTCGGCATTAAAGTAGGCCGTGACATTCTGTCCTTGCTGAAGAGAAGTCGCTTCATTTACCGGCACTGTGGCGCACAGTGTTTG > CP009273/789127‑789422 | ttCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATGACATTTTATATCCCACTTTGTGTAGCGATTACTGa > 2:568229/1‑149 (MQ=255)ttCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGa < 1:2804129/149‑1 (MQ=255) cATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAg > 1:4042983/1‑149 (MQ=255) cATTCGAACCGACAAACGCCCAACTAACACCCGCGTTTAACGGTAGCGGAGGCACTTGCAGCGTTTTTGTGTCGATAAGAAGAAACGTGCCTTGCAAAATTTGCAACGATGACATATTATATCCCACTTTGTGCAGCGATTCCTGACAg > 1:4250424/1‑149 (MQ=255) gAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATa < 1:606473/149‑1 (MQ=255) gAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATa < 1:4933726/149‑1 (MQ=255) aaCCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATAc < 1:247759/149‑1 (MQ=255) aCCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACg > 1:5139236/1‑149 (MQ=255) cGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACgtg < 1:4503416/149‑1 (MQ=255) gACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACgtgt > 2:2798977/1‑149 (MQ=255) aCAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATCCGTGtt > 1:4711894/1‑149 (MQ=255) aCAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGtt < 1:1618641/149‑1 (MQ=255) aCAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGtt < 2:4183613/149‑1 (MQ=255) cAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGttt < 1:3874171/149‑1 (MQ=255) aaCGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCa > 1:4103299/1‑149 (MQ=255) cccAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAAc < 1:2895448/149‑1 (MQ=255) tATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTg < 1:4409036/149‑1 (MQ=255) aTCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGt < 2:4001026/149‑1 (MQ=255) cgcgTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTTACAGGGATACGTGTTTCATAACAAATTGTCAacac < 1:4214160/149‑1 (MQ=255) cgTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGc < 1:1912364/149‑1 (MQ=255) gTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCt > 1:662210/1‑149 (MQ=255) tttAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCtt < 2:2911158/149‑1 (MQ=255) tttAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCtt < 2:2463741/149‑1 (MQ=255) ttAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTTACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTa < 2:1843635/149‑1 (MQ=255) aaCGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGc < 2:1562620/149‑1 (MQ=255) aaCGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGc > 1:3454911/1‑149 (MQ=255) aCGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGca > 2:3687766/1‑149 (MQ=255) aCGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGca > 2:2967399/1‑149 (MQ=255) aCGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGca > 2:894836/1‑149 (MQ=255) gTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTTACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGcaca > 1:3362514/1‑149 (MQ=255) ttAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAACTTGTCAACACGCTTAGCACAg > 1:3767536/1‑149 (MQ=255) ttAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAg > 1:1079119/1‑149 (MQ=255) ttAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAg < 1:4993766/149‑1 (MQ=255) aGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCg > 2:2286545/1‑149 (MQ=255) tGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTgg < 1:4368929/149‑1 (MQ=255) tGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTgg < 1:4516855/149‑1 (MQ=255) gAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGc < 1:331814/149‑1 (MQ=255) cAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATa < 1:1230789/149‑1 (MQ=255) aaTTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATaa < 2:2150338/149‑1 (MQ=255) aGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGc > 1:3544073/1‑149 (MQ=255) aGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGc > 2:4430863/1‑149 (MQ=255) aGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGc > 1:1718319/1‑149 (MQ=255) aGCGTTGTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGc < 2:4133233/149‑1 (MQ=255) gCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGCt > 1:633117/1‑149 (MQ=255) tgtgTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGCTGTCGGCa < 1:5115715/149‑1 (MQ=255) tgtgTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGCTGTCGGCa < 2:1515360/149‑1 (MQ=255) gtgtCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGCTGTCGGCAt > 2:2025395/1‑149 (MQ=255) tCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGCTGTCGGCATTaa > 2:3559897/1‑149 (MQ=255) tAAGACGAAACGTGCCTTGCAAAATTTGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGCTGTCGGCATTAAAGTa > 1:2643225/1‑149 (MQ=255) tAAGACGAAACGTGCCTTGCAAAATTTGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGCTGTCGGCATTAAAGTa > 2:2603353/1‑149 (MQ=255) tAAGACGAAACGTGCCTTGCAAAATTTGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGCTGTCGGCATTAAAGTa > 1:2263030/1‑149 (MQ=255) aGACGAAACGTGCCTTGCAAAATTTGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGCTGTCGGCATTAAAGTAgg > 1:1028938/1‑149 (MQ=255) gACGAAACGTGCCTTGCAAAATTTGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGCTGTCGGCATTAAAGTAGGc > 2:3434962/1‑149 (MQ=255) gACGAAACGTGCCTTGCAAAATTTGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGCTGTCGGCATTAAAGTAGGc < 2:183255/149‑1 (MQ=255) gACGAAACGTGCCTTGCAAAATTTGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGCTGTCGGCATTAAAGTAGGc < 2:4554618/149‑1 (MQ=255) aaaCGTGCCTTGCAAAATTTGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGCTGTCGGCATTAAAGTAGGCCGTg < 2:1136085/149‑1 (MQ=255) aaCGTGCCTTGCAAAATTTGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGCTGTCGGCATTAAAGTAGGCCGTGa > 2:5111620/1‑149 (MQ=255) aCGTGCCTTGCAAAATTTGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTTACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGCTGTCGGCATTAAAGTAGGCCGTGAc < 2:385908/149‑1 (MQ=255) gTGCCTTGCAAAATTTGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGCTGTCGGCATTAAAGTAGGCCGTGACAt < 2:3758341/149‑1 (MQ=255) gTGCCTTGCAAAATTTGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGCTGTCGGCATTAAAGTAGGCCGTGACAt < 1:2208676/149‑1 (MQ=255) tGCCTTGCAAAATTTGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGCTGTCGGCATTAAAGTAGGCCGTGACAtt > 2:144123/1‑149 (MQ=255) cTTGCAAAATTTGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGCTGTCGGCATTAAAGTAGGCCGTGACATTCTg > 1:4635852/1‑149 (MQ=255) cTTGCAAAATTTGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGCTGTCGGCATTAAAGTAGGCCGTGACATTCTg > 2:481961/1‑149 (MQ=255) tGCAAAATTTGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGCTGTCGGCATTAAAGTAGGCCGTGACATTCTGTc < 1:1407841/149‑1 (MQ=255) cAAAATTTGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGCTGTCGGCATTAAAGTAGGCCGTGACATTCTGTCCt < 2:852999/149‑1 (MQ=255) cAAAATTTGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGCTGTCGGCATTAAAGTAGGCCGTGACATTCTGTCCt < 1:4623684/149‑1 (MQ=255) cAAAATTTGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGCTGTCGGCATTAAAGTAGGCCGTGACATTCTGTCCt < 1:1972882/149‑1 (MQ=255) aaTTTGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGCTGTCGGCATTAAAGTAGGCCGTGACATTCTGTCCTTGc > 2:4713369/1‑149 (MQ=255) aaTTTGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGCTGTCGGCATTAAAGTAGGCCGTGACATTCTGTCCTTGc < 2:4043007/149‑1 (MQ=255) aaTTTGCAACGATGACATTTTAGATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGCTGTCGGCATTAAAGTAGGCCGTGACATTCTGTCCTTGc < 2:4250424/149‑1 (MQ=255) aTTTGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGCTGTCGGCATTAAAGTAGGCCGTGACATTCTGTCCTTGCt > 2:3281701/1‑149 (MQ=255) tttGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGCTGTCGGCATTAAAGTAGGCCGTGACATTCTGTCCTTGCTg > 1:3155896/1‑149 (MQ=255) gCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGCTGTCGGCATTAAAGTAGGCCGTGACATTCTGTCCTTGCTGAag > 2:4970615/1‑149 (MQ=255) cAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGCTGTCGGCATTAAAGTAGGCCGTGACATTCTGTCCTTGCTGAaga < 1:3235760/149‑1 (MQ=255) aaCGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGCTGTCGGCATTAAAGTAGGCCGTGACATTCTGTCCTTGCTGAagag > 2:2401802/1‑149 (MQ=255) cGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGCTGTCGGCATTAAAGTAGGCCGTGACATTCTGTCCTTGCTGAAGAGaa < 1:2296259/149‑1 (MQ=255) gATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGCTGTCGGCATTAAAGTAGGCCGTGACATTCTGTCCTTGCTGAAGAGAAg > 2:3923315/1‑149 (MQ=255) gATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGCTGTCGGCATTAAAGTAGGCCGTGACATTCTGTCCTTGCTGAAGAGAAg > 1:4752259/1‑149 (MQ=255) gATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGCTGTCGGCATTAAAGTAGGCCGTGACATTCTGTCCTTGCTGAAGAGAAg > 1:1459985/1‑149 (MQ=255) aCATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGCTGTCGGCATTAAAGTAGGCCGTGACATTCTGTCCTTGCTGAAGAGAAGTCGc < 1:3662518/149‑1 (MQ=255) agatCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGCTGTCGGCATTAAAGTAGGCCGTGACATTCTGTCCTTGCTGAAGAGAAGTCGCTTCAttt < 1:550437/147‑1 (MQ=255) tatCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGCTGTCGGCATTAAAGTAGGCCGTGACATTCTGTCCTTGCTGAAGAGAAGTCGCTTCATTTa > 2:1950772/1‑149 (MQ=255) tCCCACTTTGTGCAGCGATTACTTACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGCTGTCGGCATTAAAGTAGGCCGTGACATTCTGTCCTTGCTGAAGAGAAGTCGCTTCATTTAcc < 2:3362514/149‑1 (MQ=255) cccACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGCTGTCGGCATTAAAGTAGGCCGTGACATTCTGTCCTTGCTGAAGAGAAGTCGCTTCATTTACCg > 1:1199075/1‑149 (MQ=255) cACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGCTGTCGGCATTAAAGTAGGCCGTGACATTCTGTCCTTGCTGAAGAGAAGTCGCTTCATTTACCGGc > 1:821747/1‑149 (MQ=255) aCTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGCTGTCGGCATTAAAGTAGGCCGTGACATTCTGTCCTTGCTGAAGAGAAGTCGCTTCATTTACCGGCa > 1:2594564/1‑149 (MQ=255) cTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGCTGTCGGCATTAAAGTAGGCCGTGACATTCTGTCCTTGCTGAAGAGAAGTCGCTTCATTTACCGGCAc > 1:2988461/1‑149 (MQ=255) cTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGCTGTCGGCATTAAAGTAGGCCGTGACATTCTGTCCTTGCTGAAGAGAAGTCGCTTCATTTACCGGCAc < 2:2125903/149‑1 (MQ=255) cTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGCTGTCGGCATTAAAGTAGGCCGTGACATTCTGTCCTTGCTGAAGAGAAGTCGCTTCATTTACCGGCAc < 2:3797780/149‑1 (MQ=255) tttGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGCTGTCGGCATTAAAGTAGGCCGTGACATTCTGTCCTTGCTGAAGAGAAGTCGCTTCATTTACCGGCACt < 1:2325457/149‑1 (MQ=255) tttGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGCTGTCGGCATTAAAGTAGGCCGTGACATTCTGTCCTTGCTGAAGAGAAGTCGCTTCATTTACCGGCACt < 1:4567125/149‑1 (MQ=255) gtgCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGCTGTCGGCATTAAAGTAGGCCGTGACATTCTGTCCTTGCTGAAGAGAAGTCGCTTCATTTACCGGCACtgtg < 2:4313993/149‑1 (MQ=255) gCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGCTGTCGGCATTAAAGTAGGCCGTGACATTCTGTCCTTGCTGAAGAGAAGTCGCTTCATTTACCGGCACTGTGgc > 2:1256046/1‑149 (MQ=255) gATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGCTGTCGGCATTAAAGTAGGCCGTGACATTCTGTCCTTGCTGAAGAGAAGTCGCTTCATTTACCGGCACTGTGGCGcaca > 2:1058576/1‑149 (MQ=255) ttACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGCTGTCGGCATTAAAGTAGGCCGTGACATTCTGTCCTTGCTGAAGAGAAGTCGCTTCATTTACCGGCACTGTGGCGCACAgt < 1:2455844/149‑1 (MQ=255) cTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGCTGTCGGCATTAAAGTAGGCCGTGACATTCTGTCCTTGCTGAAGAGAAGTCGCTTCATTTACCGGCACTGTGGCGCACAGTGtt > 1:2079565/1‑149 (MQ=255) cTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGCTGTCGGCATTAAAGTAGGCCGTGACATTCTGTCCTTGCTGAAGAGAAGTCGCTTCATTTACCGGCACTGTGGCGCACAGTGtt < 2:2834614/149‑1 (MQ=255) cTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGCTGTCGGCATTAAAGTAGGCCGTGACATTCTGTCCTTGCTGAAGAGAAGTCGCTTCATTTACCGGCACTGTGGCGCACAGTGtt < 2:291903/149‑1 (MQ=255) cTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGCTGTCGGCATTAAAGTAGGCCGTGACATTCTGTCCTTGCTGAAGAGAAGTCGCTTCATTTACCGGCACTGTGGCGCACAGTGtt < 2:1693246/149‑1 (MQ=255) cTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGCTGTCGGCATTAAAGTAGGCCGTGACATTCTGTCCTTGCTGAAGAGAAGTCGCTTCATTTACCGGCACTGTGGCGCACAGTGtt < 1:3906918/149‑1 (MQ=255) | TTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGCTGTCGGCATTAAAGTAGGCCGTGACATTCTGTCCTTGCTGAAGAGAAGTCGCTTCATTTACCGGCACTGTGGCGCACAGTGTTTG > CP009273/789127‑789422 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |