| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,118,506 | A→T | 10.6% | L75Q (CTA→CAA) | yceB ← | lipoprotein, DUF1439 family |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,118,506 | 0 | A | T | 10.6% | 771.9 / 17.4 | 263 | L75Q (CTA→CAA) | yceB | lipoprotein, DUF1439 family |
| Reads supporting (aligned to +/- strand): ref base A (119/107); new base T (3/33); total (122/141) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.30e-07 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 264 total aligned reads displayed.
TGTACCGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCTTGTTCGGTGATGGT > CP009273/1118359‑1118654 | tACCGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAggg > 2:2488131/1‑149 (MQ=255) aCCGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGt > 2:2742966/1‑149 (MQ=255) cGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTATGACTACCGAACAGGGAGTTGATGTCCAGATTGGCGTCTCCGGGTAGGGTaa > 1:3149167/1‑149 (MQ=255) gTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAAc > 1:4594762/1‑149 (MQ=255) tCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAAcc > 2:4458510/1‑149 (MQ=255) cGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCt > 2:4709868/1‑149 (MQ=255) gaaTCGACCACTTCAATCTCTTTCAGGAATATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCtt < 2:1910322/147‑1 (MQ=255) gCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCtt < 2:2892531/149‑1 (MQ=255) gCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGGTCATGTACAGATTGGCGTCTCCGGTTAGGGTAAccat > 1:2332158/1‑147 (MQ=255) gACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCg > 2:3178150/1‑149 (MQ=255) gACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCg < 1:769665/149‑1 (MQ=255) aCCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCgg > 2:1180755/1‑149 (MQ=255) cATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGGTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTGATTCGGCTCTTcgc > 2:4435546/1‑149 (MQ=255) tctcTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTGTGACTAACGAACAGGGAGTTAATGTCCAGATTGGGGTCTACGGGTAGGGTAACCTTATTAGGCTCTTCGCGa > 1:4427135/1‑149 (MQ=255) tctcTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGa > 2:1134170/1‑149 (MQ=255) ctctTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGAc > 2:3845513/1‑149 (MQ=255) tctTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCCTGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGAcc > 2:1574620/1‑149 (MQ=255) tctTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGAcc > 2:2945422/1‑149 (MQ=255) ttCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAAt < 1:4242011/149‑1 (MQ=255) tCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAAtt < 2:1344095/149‑1 (MQ=255) cAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAAttt < 1:1951435/149‑1 (MQ=255) ggAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGCGTTCATGTCCAGATTGGGGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCACGTTgg > 2:4125464/1‑149 (MQ=255) ggAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTgg > 2:2981989/1‑149 (MQ=255) ggAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCCAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTgg > 1:2860423/1‑149 (MQ=255) ggAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTATGTCTAACGAAAAGGGAGTTCATGTCCAGATTGTCGTCTACGGGTAGGGTAAACTTATTAGGCTATTAGCGACCCAttttg > 1:939448/1‑147 (MQ=255) gAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGc < 2:1874003/149‑1 (MQ=255) gAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGc > 2:2800046/1‑149 (MQ=255) gAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGc < 1:4553743/149‑1 (MQ=255) gAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGc < 1:1797882/149‑1 (MQ=255) aaGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCt > 2:316893/1‑149 (MQ=255) gATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTgg < 2:128071/149‑1 (MQ=255) gATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTgg < 1:107154/149‑1 (MQ=255) cACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCGTATTCGGCTCTTCGCGACCAATTTTGCTGGTCAgg > 1:2550050/1‑149 (MQ=255) aCCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGt < 2:258540/149‑1 (MQ=255) ttCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTGTGACTAACGAACAGGGAGTTAATGTACCGATTGTCGTCTCCGGTGTGGGTAAACTTATTGGGCGGTTAGCGACCAAATTTGGTGGTGAGGtttttta > 1:3076539/1‑145 (MQ=255) ttATCAAACTCGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTTGCTGGTCAGGTTTGTCAGAAc < 1:4824687/149‑1 (MQ=255) ttATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAAc < 1:1722996/149‑1 (MQ=255) tATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAAATTGGCTGGTCAGGTTTGTCAGAACa > 2:3092277/1‑149 (MQ=255) aTCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACaa < 2:2218703/149‑1 (MQ=255) aaaCACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTGTGTCTACCCAACAGGGAGTTCATTTGCAGATTTGCGTCGCCGGGTAGGGTAACCTTATTAGGCTCTTCGCGACCAAATTTGGTGGTGAGGGTTGTCAGAACAaaat > 1:2254579/1‑149 (MQ=255) cacGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATggg < 2:5171162/149‑1 (MQ=255) acGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGc < 1:1292632/149‑1 (MQ=255) acGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTAACGAACAGGGAGTTAATGTCCAGATTGGCGTCTCCGGTTATGGTAAACTGATTAGGCTCTTAGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGc > 1:2020689/1‑149 (MQ=255) ggCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTc < 1:5076996/149‑1 (MQ=255) ggCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTAGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTAAGAACAAAATGGGCGTc > 2:4786281/1‑149 (MQ=255) gCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCa < 1:373258/149‑1 (MQ=255) gcgcTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGcc < 1:110709/149‑1 (MQ=255) gcgcTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTAACGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATTGGCGTCAGcc > 2:1011368/1‑149 (MQ=255) gcTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGCACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCAc < 2:2545309/149‑1 (MQ=255) cTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGGGTTCATGTCCAGATTTGCGTCTCCGGTTAGGGTAACCGTATTCGGCTCTTCGCGACCAATTTTGCGGGTCAGGTTTGTCAGAACAAAATGGGCGTCAGCCACg > 1:4218324/1‑149 (MQ=255) tttCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCCAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTAGGCTCGTCGCGACCAAATTGGCTGGTCAGGTTTGTCAGAACAATAAGGGCGTCAGCCACGc > 1:3156583/1‑149 (MQ=255) ttCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTTGCGTCTCCGGTTAGGGTAACCTTATTCGGCGCTTCGCGACCAAATTGGCTGGTCAGGTTTTTCAGAAAAATATGGGCGTCAGCCACGcc > 1:4766762/1‑149 (MQ=255) cAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCgg > 2:2287819/1‑149 (MQ=255) cAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTAGCGACCAATTTTGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCgg > 2:4890967/1‑149 (MQ=255) aGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCggg > 2:205403/1‑149 (MQ=255) gCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGt > 2:3736104/1‑149 (MQ=255) gCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGACAGCCACGCCGGGt < 2:269331/149‑1 (MQ=255) cTTCTGTTTAATGGTCGCTTTCTGACTACCGAACAGGTTGTTCATGTCCAGATTGGCGTCTCGGGTTAGGGTAACCTTATTGGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTa < 2:4572852/149‑1 (MQ=255) ctttttCTTGGTCGTTTTCTGACTACCTAACTGGGTTTTCTTTTCCAGTTTGGCGTCTCGGTTTTGGTTAACCTTTTTCGGCTCTTCGCGACAATTTTGGCTGGTCAGGTTTGTCATAACAATTTGGGCGTCAGCCACGCCGGGTAAAc < 1:5188751/146‑1 (MQ=255) ttCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTTGGGTAACCTTATTCGGCTCTTCGCGACCAATTGGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGat < 2:1091102/149‑1 (MQ=255) ttCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGat < 2:2991822/149‑1 (MQ=255) tCATGGTCGCTTTCGGACTACCGAACAGGGTTTTCTTGTCCAGATTGGCGTCTCCGGTTTGGGTAACCTTTTTCGGCTCTTCGCGACCATTTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGata < 2:1417267/149‑1 (MQ=255) ggTCGCTTTCTGACTACCGAACCGGGTGTTCATGTCCATATTGGCGTCTCCGGTTAGGTTAACCTTATTCGGCTCTCCGCGACAAATTTGGCTGGTCTGGTTTGTCATAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCtt < 2:457937/149‑1 (MQ=255) gTCGTTTTCTGACTACCTAACAGGGTTTTCATGTCCAGTTTGGCGTCGCCGGTTAGGTTACCCTTATGCGGATCTTCGCGACAATTTTGGGTGGTCTGTTTTGTCACAACAATTGGGGCCTCACCCACGCCGGGTAAACCGATATCttt < 1:100182/149‑1 (MQ=255) gTCGCTTTCTGACTACCTAACTGGTATTTATTGTCCTGATGGGCGTCTCCGGTTAGGTTAACCTTATTCGGCTATTCGCGACAAATTTGGCTGGTCTGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCttt < 1:1180755/149‑1 (MQ=255) tCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGTTTGGCGTCTCCGGTTTGGGTAACCTTATTCGGCTCTTCGCGACAATTTTGGCTGTTCAGTTTTGTCAGAACAATTTGGGCGTCAGCCACGCCGGGTAAACCGATATCtttt < 1:4634380/149‑1 (MQ=255) tttCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTgaga > 2:168815/1‑149 (MQ=255) ttCTGACTACCGAACTGGGAGTTCATGTCCTGTTTGGCGTCTCCGGTTTGGGTAACTTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCTGGTTTGTCAGAACAATTTGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGaa < 1:3845513/149‑1 (MQ=255) ttCTGACTACCGAACAGGGAGTTCATTTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTAAGCCACGCCGGGTAAACCGATATCTTTTGAGaa < 2:4909589/149‑1 (MQ=255) ttCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGaa > 1:1505903/1‑149 (MQ=255) ttCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGaa > 2:2938834/1‑149 (MQ=255) cTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAat < 2:5102537/149‑1 (MQ=255) ttaCTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTTGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCTGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAatt < 2:1589440/147‑1 (MQ=255) tGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAatt > 2:2436932/1‑149 (MQ=255) gACTACCGAACTGGGTTTTCTTGTCCCGATTGGCGTCTCCGTTTTGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGTTTTGTCATAACAATTTGGGCTACAGCCACGCCGGGTAAACCGATATCTTTTGAGAAatta < 2:4344543/149‑1 (MQ=255) gACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCTGGGTAAACCGATATCTTTTGAGAAatta < 2:3680925/149‑1 (MQ=255) gACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAatta > 1:3471222/1‑149 (MQ=255) aatACCTAACTGGGATTTAATGTCCAGTTTGGCTTCTCGGTTTTGGTTAACATTATTCGGATCTTCGCGACAATTTTGGTTGTTCAGGTTTTACATAACATTTTGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAattat < 1:2271252/147‑1 (MQ=255) aCAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTc < 2:777676/149‑1 (MQ=255) aCAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTc < 2:939448/149‑1 (MQ=255) aCAGGGAGTTCATGTCCAGATGGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTc < 2:2850100/149‑1 (MQ=255) ggAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCaa < 2:3331248/149‑1 (MQ=255) gAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAg > 1:2628580/1‑149 (MQ=255) gTTCTTGTCCAGTTTGGCGTCTCGGTTTTGGTTAACTTTATTCGGCTCTTCGCGACAATTTTGGCTGGTCTGGTTTGTCAGAACAATCTGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCg < 1:2988166/149‑1 (MQ=255) gTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACATTATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTAGCAAGCg > 2:3047058/1‑149 (MQ=255) gTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCg > 1:1558691/1‑149 (MQ=255) ttCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGa > 2:2781635/1‑149 (MQ=255) tCATGTCCTGATTGGCGTCTCCGTTTTGGGTAACCTTATTCGGCTCTTCGCGACAATTTTGGCTGGTAAGTTTTGTCAGAACAATTTGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGAc < 1:4299432/149‑1 (MQ=255) tgATTGGCGTCTCGGGTTTGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGTTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAAt < 2:3453079/148‑1 (MQ=255) aGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAAt > 1:3915520/1‑149 (MQ=255) aGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAAt > 2:3275990/1‑149 (MQ=255) tatgggggTCTCCGTTTTGGGTAACCTTATTCGGCTCTTCGCGACCATTTTGGGTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAAtt < 2:4594762/142‑1 (MQ=255) gATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAAtt > 1:2770127/1‑149 (MQ=255) ttGGCGTCTCCGTTTTGGGTAACCTTATTCGGCTCTTCGCGACCATTTTGGCTGGTCTGTTTGGTCAGAACAATATGGGCGACAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTc < 2:4095625/149‑1 (MQ=255) ttGGCGTCTCCGGTTTGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAATCGACGGGTTAATTTc > 1:918216/1‑149 (MQ=255) tgggCGTCTCCGTTTTGGGTAACCTTTTTCGGATCTGCGCGACAATTTGGGCGGGTCTGTTTTGTCATAAAAATTTGGGCGTCACCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTc < 1:2107024/147‑1 (MQ=255) cGTCTCCGTTTTGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTAAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCTTGt < 2:2143889/149‑1 (MQ=255) ttctcCGTTTTGGTTAACTTTTTTGGGCTCTTCGCTACAATTTTGGTTGTTATGTTTTTTATTAAAAATTTGGGCGTCACCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCTTGtt < 1:1626415/148‑1 (MQ=255) tctcCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCTTGTTc > 1:3221728/1‑149 (MQ=255) gTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCTTGTTCGGTGAt > 2:4833591/1‑149 (MQ=255) | TGTACCGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCTTGTTCGGTGATGGT > CP009273/1118359‑1118654 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |