| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,243,278 | G→A | 14.1% | S431S (AGC→AGT) | dhaM ← | putative dihydroxyacetone‑specific PTS enzymes: HPr component/EI component |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,243,278 | 0 | G | A | 14.1% | 900.6 / 108.3 | 304 | S431S (AGC→AGT) | dhaM | putative dihydroxyacetone‑specific PTS enzymes: HPr component/EI component |
| Reads supporting (aligned to +/- strand): ref base G (108/152); new base A (19/24); total (128/176) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.42e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 307 total aligned reads displayed.
ACGATGCCATCCGAACAGTGGCTTAACCCTGACGGTTGAAACGTTGCGTTTTAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTTCTCCGCCAGTAGAATAGTTGGCGAGTTAAACTGCGGGAGTTCTTCTTTCGTTTGGGTCAGGT > CP009273/1243130‑1243426 | aCGATGCCATCCGAACAGTGGCTTAACCCTGACGGTTGAAACGTTGCGTTTTAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGgcg > 2:4727968/1‑149 (MQ=255) aTGCCATCCGAACAGTGGCTTAACCCTGACGGTTGAAACGTTGCGTTTTAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCtg > 1:77035/1‑149 (MQ=255) gCCATCCGAACAGTGGCTGAACCCTGACGGTTGAAACGTTGCGTTTTAACGTCCAGCGTTAGCGTTTCTTCTGGTTTTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGTCGCtgtg < 2:2191266/149‑1 (MQ=255) aTCCGAACAGTGGCTTAACCCTGACGGTTGAAACGTTGCGTTTTAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCACTGTGGGa < 1:3372666/149‑1 (MQ=255) cGAACAGTGGCTTAACCCTGACGGTTGAAACGTTGCGTTTTAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCACTGTGGGATAc < 1:3241149/149‑1 (MQ=255) aaCAGTGGCTTAACCCTGACGGTTGAAACGTTGCGTTTTAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCg > 2:4829867/1‑149 (MQ=255) aaCAGTGGCTTAACCCTGACGGTTGAAACGTTGCGTTTTAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCg > 2:1354244/1‑149 (MQ=255) aCAGTGGCTTAACCCTGACGGTTGAAACGTTGCGTTTTAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCgg > 1:3313413/1‑149 (MQ=255) aGTGGCTTAACCCTGACGGTTGAAACGTTGCGTTTTAACGTCCAGCGTTATCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGAc < 1:1926814/149‑1 (MQ=255) aGTGGCTTAACCCTGACGGTTGAAACGTTGCGTTTTAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGAc > 2:5140088/1‑149 (MQ=255) gTGGCTTAACCCTGACGGTTGAAACGTTGCGTTTTAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACt > 2:1530339/1‑149 (MQ=255) gTGGCTTAACCCTGACGGTTGAAACGTTGCGTTTTAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACt > 2:114707/1‑149 (MQ=255) gTGGCTTAACCCTGACGGTTGAAACGTTGCGTTTTAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATGAGGGCGCTGTGGGATACCGGACt > 2:444107/1‑149 (MQ=255) gTGGCTTAACCCTGACGGTTGAAACGTTGCGTTTTAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATGAGGGCGCGGTGGGATACCGGACt > 1:3150364/1‑149 (MQ=255) ggCTTAACCCTGACGGTTGAAACGTTGCGTTTTAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTc < 1:821010/149‑1 (MQ=255) ggCTTAACCCTGACGGTTGAAACGTTGCGTTTTAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTc < 2:1770899/149‑1 (MQ=255) ggCTTAACCCTGACGGTTGAAACGTTGCGTTTTAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTc > 2:226430/1‑149 (MQ=255) ggCTTAACCCTGACGGTTGAAACGTTGCGTTTTAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTc > 2:3413428/1‑149 (MQ=255) tcTTAACCCTGACGGTTGAAACGTTGCGTTTTAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTcc < 1:4259963/148‑1 (MQ=255) gCTTAACCCTGACGGTTGAAACGTTGCGTTTTAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTcc > 1:2913370/1‑149 (MQ=255) gCTTAACCCTGACGGTTGAAACGTTGCGTTTTAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTcc < 2:4223754/149‑1 (MQ=255) gCTTAACCCTGACGGTTGAAACGTTGCGTTTTAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCACTGTGGGATACCGGACTTcc < 1:4293445/149‑1 (MQ=255) tAACCCTGACGGTTGAAACGTTGCGTTTTAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGgc < 1:956087/149‑1 (MQ=255) cccTGACGGTTGAAACGTTGCGTTTTAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCt < 1:525587/149‑1 (MQ=255) ccTGACGGTTGAAACGTTGCGTTTTAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTa < 2:879417/149‑1 (MQ=255) cTGACGGTTGAAACGTTGCGTTTTAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTaa > 2:3631916/1‑149 (MQ=255) gACGGTTGAAACGTTGCGTTTTAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAACTCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAgg < 2:2071028/149‑1 (MQ=255) aCGGTTGAAACGTTGCGTTTTAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGc < 1:4473279/149‑1 (MQ=255) accgctccGTTTTAACGTCCCCCGTAAGCGTTACTACTGGTCGTATCGCATACAGTTCCTCCCCCGGCTGGCAAAACCAGCCAATCCCCACTTCACGGGCGATTAGGGCGCTGTGGGATACCGCACTACCGGCGCTAAGGCAGATACCt < 2:196606/142‑1 (MQ=255) aaCGTTGCGTTTTAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCt > 1:4703245/1‑149 (MQ=255) aCGTTGCGTTTTAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCtt > 1:1573094/1‑149 (MQ=255) aCGTTGCGTTTTAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCtt < 1:1533988/149‑1 (MQ=255) gTTGCGTTTTAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCtttt < 2:2873686/149‑1 (MQ=255) ttGCGTTTTAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTa > 2:987996/1‑149 (MQ=255) cGTTTTAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACaa < 2:3012759/149‑1 (MQ=255) gTTTTAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAAc < 1:1884597/149‑1 (MQ=255) gTTTTAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCACTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAAc < 1:1932869/149‑1 (MQ=255) ttAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAAccgc < 1:1428588/149‑1 (MQ=255) ttAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAAccgc < 1:2749021/149‑1 (MQ=255) ttagcgttTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCCGTTGc > 2:3862834/1‑149 (MQ=255) ttagcgttTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGc > 2:4071997/1‑149 (MQ=255) ttagcgttTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGc < 2:1473357/149‑1 (MQ=255) ttagcgttTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCACTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCAGGATCCAGTTGc < 1:4961123/149‑1 (MQ=255) tagcgttTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCa < 2:5205147/149‑1 (MQ=255) tagcgttTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCa > 1:2359408/1‑149 (MQ=255) tagcgttTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCa < 1:3849811/149‑1 (MQ=255) agcgttTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAg < 1:2663244/149‑1 (MQ=255) agcgttTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAg < 1:2158876/149‑1 (MQ=255) agcgttTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAg > 1:3913672/1‑149 (MQ=255) gttTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCACTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTAc < 2:4541787/149‑1 (MQ=255) tttCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACt > 1:3582801/1‑149 (MQ=255) tcttctGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACtgt < 2:3984567/149‑1 (MQ=255) ttctGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTgg < 2:4179566/149‑1 (MQ=255) ctGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGaa < 1:1819776/149‑1 (MQ=255) gTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCCGTTGCAGTACTGTGGAAGGa > 2:1886037/1‑149 (MQ=255) gTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGACAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGa < 1:1090665/149‑1 (MQ=255) tGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATa < 1:3014555/149‑1 (MQ=255) tGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATa < 2:3146422/149‑1 (MQ=255) tCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATg > 2:364992/1‑149 (MQ=255) gCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGtt < 2:5047121/149‑1 (MQ=255) gCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGtt < 2:3086246/149‑1 (MQ=255) cATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTtc < 1:4383094/149‑1 (MQ=255) aTACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTtct < 2:62257/149‑1 (MQ=255) tACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTtctc < 1:4793344/149‑1 (MQ=255) aCAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTTCTcc < 1:4727968/149‑1 (MQ=255) tttCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTTCTCCGCCa < 2:293368/149‑1 (MQ=255) ttCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTTCTCCGCCAg < 2:2302897/149‑1 (MQ=255) cACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTTCTCCGCCAGTAGa < 1:5064124/149‑1 (MQ=255) aCCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGAGTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTTCTCCGCCAGTAGac > 1:4436920/1‑148 (MQ=255) cccTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTTCTCCGCCAGTAGAAt > 2:3195678/1‑149 (MQ=255) ccTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTTCTCCGCCAGTAGAATa < 1:2473968/149‑1 (MQ=255) ctgctgGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTTCTCCGCCAGTAGAATAg < 2:1705294/149‑1 (MQ=255) tgctgGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTTCTCCGCCAGTAGAATAGt < 2:4933304/149‑1 (MQ=255) gctgGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTTCTCCGCCAGTAGAATAGtt < 2:3704621/149‑1 (MQ=255) tgGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCACTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTTCTCCGCCAGTAGAATAGTTgg < 1:5183736/149‑1 (MQ=255) ggCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTTCTCCGCCAGTAGAATAGTTGGc > 2:214381/1‑149 (MQ=255) gCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTTCTCCGCCAGTAGAATAGTTGGCg < 2:2602347/149‑1 (MQ=255) gCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTTCTCCGCCAGTAGAATAGTTGGCg < 2:2562192/149‑1 (MQ=255) aaTCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTTCTCCGCCAGTAGAATAGTTGGCGAGt < 2:902620/149‑1 (MQ=255) aTCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTTCTCCGCCAGTAGAATAGTTGGCGAGtt > 2:5007479/1‑149 (MQ=255) aTCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTTCTCCGCCAGTAGAATAGTTGGCGAGtt > 2:46233/1‑149 (MQ=255) aTCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCACTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTTCTCCGCCAGTAGAATAGTTGGCGAGtt > 1:3219384/1‑149 (MQ=255) tCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTTCTCCGCCAGTAGAATAGTTGGCGAGTTa > 2:2302480/1‑149 (MQ=255) cAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTTCTCCGCCAGTAGAATAGTTGGCGAGTTaaa > 1:213788/1‑149 (MQ=255) aGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTTCTCCGCCAGTAGAATAGTTGGCGAGTTAAAc > 1:3494237/1‑149 (MQ=255) aGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTGTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTTCTCCGCCAGTAGAATAGTTGGCGAGTTAAAc > 2:4508304/1‑149 (MQ=255) aaTCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTTCTCCGCCAGTAGAATAGTTGGCGAGTTAAACTGCg > 2:2733732/1‑149 (MQ=255) aaTCCCCAGTTCACGGGCGATTAGGGCACTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTTCTCCGCCAGTAGAATAGTTGGCGAGTTAAACTGCg < 1:1735166/149‑1 (MQ=255) tCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTTCTCCGCCAGTAGAATAGTTGGCGAGTTAAACTGCggg > 2:3231563/1‑149 (MQ=255) tCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTTCTCCGCCAGTAGAATAGTTGGCGAGTTAAACTGCggg > 1:1395146/1‑149 (MQ=255) tCCCCAGTTCACGGGCGAGTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTTCTCCGCCAGTAGAATAGTTGGCGAGTTAAACTGCggg > 2:1016627/1‑149 (MQ=255) cAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTTCTCCGCCAGTAGAATAGTTGGCGAGTTAAACTGCGGGAGtt < 1:4901599/149‑1 (MQ=255) ggCGATTAGGGATCTGTGGGATAACGGACTTCCGGCGCTAAGGCATATACCTTTTACAACAGACCGAACCATTTGCAGTAATGTTTAAGTATAAATGTTCTCCGACAGTAGAAAAGATGGCGAGTTAAACTGCGGGAGTTCTTAATTCg > 2:2514095/1‑149 (MQ=255) cGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTTCTCCGCCAGTAGAATAGTTGGCGAGTTAAACTGCGGGAGTTCTTCTTTCGtt < 2:4238658/149‑1 (MQ=255) cGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTTCTCCGCCAGTAGAATAGTTGGCGAGTTAAACTGCGGGAGTTCTTCTTTCGtt < 2:784404/149‑1 (MQ=255) gATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTTCTCCGCCAGTAGAATAGTTGGCGAGTTAAACTGCGGGAGTTCTTCTTTCGttt > 1:1491138/1‑149 (MQ=255) aTTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTTCTCCGCCAGTAGAATAGTTGGCGAGTTAAACTGCGGGAGTTCTTCTTTCGTTTg > 1:3282966/1‑149 (MQ=255) aTTAGGGCACTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTTCTCCGCCAGTAGAATAGTTGGCGAGTTAAACTGCGGGAGTTCTTCTTTCGTTTg > 2:691501/1‑149 (MQ=255) tAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTTCTCCGCCAGTAGAATAGTTGGCGAGTTAAACTGCGGGAGTTCTTCTTTCGTTTggg < 1:5001583/149‑1 (MQ=255) cgcTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTTCTCCGCCAGTAGAATAGTTGGCGAGTTAAACTGCGGGAGTTCTTCTTTCGTTTGGGTCAgg > 2:756613/1‑149 (MQ=255) | ACGATGCCATCCGAACAGTGGCTTAACCCTGACGGTTGAAACGTTGCGTTTTAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTTCTCCGCCAGTAGAATAGTTGGCGAGTTAAACTGCGGGAGTTCTTCTTTCGTTTGGGTCAGGT > CP009273/1243130‑1243426 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |