Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 1,471,707 A→T 23.2% *769C (TGA→TGT ydbD → PF10971 family putative periplasmic methylglyoxal resistance protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092731,471,7070AT23.2% 687.0 / 207.8 287*769C (TGA→TGTydbDPF10971 family putative periplasmic methylglyoxal resistance protein
Reads supporting (aligned to +/- strand):  ref base A (103/117);  new base T (32/35);  total (135/152)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 292 total aligned reads displayed.

ATGTATTAAAGGCGAGGCTGAAACGTGATCCTTTGCTGGCGTTAGAGCTTGTTAACCCTGAACTGGATTTAGTCCGCCAGCTGGCGCTTAACGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGATCCACAACGTAATGTTTTTTAACTATCTGATTAATTGGGGATAATCATTCCTGACAGTGAGTCCCCAATACCTTGATATATTCTGAATTTTTAATGAAACGGCGTGTTGCGATATCTCCGTCAGGGGAATTGATGCACCATAGCGCAA  >  CP009273/1471559‑1471855
                                                                                                                                                    |                                                                                                                                                    
aTGTATTAAAGGCGAGGCTGAAACGTGATCCTTTGCTGGCGTTAGAGCTTGTTAACCCTGAACTGGATTTAGTCCGCCAGCTGGCGCTTAACGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGa                                                                                                                                                      <  2:4707671/149‑1 (MQ=255)
aTGTATTAAAGGCGAGGCTGAAACGTGATCCTTTGCTGGCGTTAGAGCTTGTTAACCCTGAACTGGATTTAGTCCGCCAGCTGGCGCTTAACGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGa                                                                                                                                                      <  2:2065875/149‑1 (MQ=255)
  gTATTAAAGGCGAGGCTGAAACGTGATCCTTTGCTGGCGTTAGAGCTTGTTAACCCTGAACTGGATTTAGTCCGCCAGCTGGCGCTTAACGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGATc                                                                                                                                                    <  2:932232/149‑1 (MQ=255)
  gTATTAAAGGCGAGGCTGAAACGTGATCCTTTGCTGGCGTTAGAGCTTGTTAACCCTGAACTGGATTTAGTCCGCCAGCTGGCGATTAACGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGATc                                                                                                                                                    <  2:3640057/149‑1 (MQ=255)
   tATTAAAGGCGAGGCTGAAACGTGATCCTTTGCTGGCGTTAGAGCTTGTTAACCCTGAACTGGATTTAGTCCGCCAGCTGGCGCTTAACGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGATcc                                                                                                                                                   >  1:407009/1‑149 (MQ=255)
   tATTAAAGGCGAGGCTGAAACGTGATCCTTTGCTGGCGTTAGAGCTTGTTAACCCTGAACTGGATTTAGTCCGCCAGCTGGCGCTTAACGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGATcc                                                                                                                                                   <  2:1215626/149‑1 (MQ=255)
        aaGGCGAGGCTGAAACGTGATCCTTTGCTGGCGTTAGAGCTTGTTAACCCTGAACTGGATTTAGTCCGCCAGCTGGCGCTTAACGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGTTCCACAAc                                                                                                                                              >  1:3431916/1‑149 (MQ=255)
        aaGGCGAGGCTGAAACGTGATCCTTTGCTGGCGTTAGAGCTTGTTAACCCTGAACTGGATTTAGTCCGCCAGCTGGCGCTTAACGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGTTCCACAAc                                                                                                                                              <  1:186552/149‑1 (MQ=255)
        aaGGCGAGGCTGAAACGTGATCCTTTGCTGGCGTTAGAGCTTGTTAACCCTGAACTGGATTTAGTCCGCCAGCTGGCGCTTAACGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGATCCACAAc                                                                                                                                              >  1:3726730/1‑149 (MQ=255)
          ggCGAGGCTGAAACGTGATCCTTTGCTGGCGTTAGAGCTTGTTAACCCTGAACTGGATTTAGTCCGCCAGCTGGCGCTTAACGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGATCCACAACGt                                                                                                                                            <  2:1539362/149‑1 (MQ=255)
           gCGAGGCTGAAACGTGATCCTTTGCTGGCGTTAGAGCTTGTTAACCCTGAACTGGATTTAGTCCGCCAGCTGGCGCTTAACGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACGTGATGAGTTGTATTGATCCACAACGTa                                                                                                                                           >  2:2867355/1‑149 (MQ=255)
             gAGGCTGAAACGTGATCCTTTGCTGGCGTTAGAGCTTGTTAACCCTGAACTGGATTTAGTCCGCCAGCTGGCGCTTAACGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGATCCACAACGTAAt                                                                                                                                         <  1:3551591/149‑1 (MQ=255)
             gAGGCTGAAACGTGATCCTTTGCTGGCGTTAGAGCTTGTTAACCCTGAACTGGATTTAGTCCGCCAGCTGGCGCTTAACGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGATCCACAACGTAAt                                                                                                                                         <  1:954840/149‑1 (MQ=255)
               ggCTGAAACGTGATCCTTTGCTGGCGTTAGAGCTTGTTAACCCTGAACTGGATTTAGTCCGCCAGCTGGCGCTTAACGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGTTCCACAACGTAATGt                                                                                                                                       <  2:4236306/149‑1 (MQ=255)
                   gAAACGTGATCCTTTGCTGGCGTTAGAGCTTGTTAACCCTGAACTGGATTTAGTCCGCCAGCTGGCGCTTAACGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGATCCACAACGTAATGttttt                                                                                                                                   >  1:4513868/1‑149 (MQ=255)
                   gAAACGTGATCCTTTGCTGGCGTTAGAGCTTGTTAACCCTGAACTGGATTTAGTCCGCCAGCTGGCGCTTAACGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGATCCACAACGTAATGttttt                                                                                                                                   <  1:1238939/149‑1 (MQ=255)
                     aaCGTGATCCTTTGCTGGCGTTAGAGCTTGTTAACCCTGAACGGGATTTAGTCCGCCAGCTGGCGCTTAACGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGATCCACAACGTAATGTTTTTTa                                                                                                                                 >  1:2280652/1‑149 (MQ=255)
                      aCGTGATCCTTTGCTGGCGTTAGAGCTTGTTAACCCTGAACTGGATTTAGTCCGCCAGCTGGCGCTTAACGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGTTCCACAACGTAATGTTTTTTaa                                                                                                                                >  1:4117943/1‑149 (MQ=255)
                      aCGTGATCCTTTGCTGGCGTTAGAGCTTGTTAACCCTGAACTGGATTTAGTCCGCCAGCTGGCGCTTAACGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGATCCACAACGTAATGTTTTTTaa                                                                                                                                >  2:3075989/1‑149 (MQ=255)
                      aCGTGATCCTTTGCTGGCGTTAGAGCATGTTAACCCTGAACTGGATTTAGTCCGCCAGCTGGCGCTTAACGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGTTCCACAACGTAATGTTTTTTaa                                                                                                                                >  1:4118674/1‑149 (MQ=255)
                        gTGATCCTTTGCTGGCGTTAGAGCTTGTTAACCCTGAACTGGATTTAGTCCGCCAGCTGGCGCTTAACGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGATCCACAACGTAATGTTTTTTAACt                                                                                                                              >  1:3028728/1‑149 (MQ=255)
                        gTGATCCTTTGCTGGCGTTAGAGCTTGTTAACCCTGAACTGGATTTAGTCCGCCAGCTGGCGCTTAACGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGATCCACAACGTAATGTTTTTTAACt                                                                                                                              >  2:2438884/1‑149 (MQ=255)
                           aTCCTTTGCTGGCGTTAGAGCTTGTTAACCCTGAACTGGATTTAGTCCGCCAGCTGGCGCTTAACGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGATCCACAACGTAATGTTTTTTAACTATc                                                                                                                           <  1:4410696/149‑1 (MQ=255)
                           aTCCTTTGCTGGCGTTAGAGCTTGTTAACCCTGAACTGGATTTAGTCCGCCAGCTGGCGCTTAACGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGATCCACAACGTAATGTTTTTTAACTATc                                                                                                                           <  1:4590396/149‑1 (MQ=255)
                            tCCTTTGCTGGCGTTAGAGCTTGTTAACCCTGAACTGGATTTAGTCCGCCAGCTGGCGCTTAACGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGTTCCACAACGTAATGTTTTTTAACTATCt                                                                                                                          <  2:2390270/149‑1 (MQ=255)
                            tCCTTTGCTGGCGTTAGAGCTTGTTAACCCTGAACTGGATTTAGTCCGCCAGCTGGCGCTTAACGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGATCCACAACGTAATGTTTTTTAACTATCt                                                                                                                          <  2:4420286/149‑1 (MQ=255)
                               tttGCTGGCGTTAGAGCTTGTTAACCCTGAACTGGATTTAGTCCGCCAGCTGGCGCTTAACGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGATCCACAACGTAATGTTTTTTAACTATCTGAt                                                                                                                       >  2:372533/1‑149 (MQ=255)
                                  gCTGGCGTTAGAGCTTGTTAACCCTGAACTGGATTTAGTCCGCCAGCTGGCGCTTAACGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGATCCACAACGTAATGTTTTTTAACTATCTGATTaa                                                                                                                    <  2:3319290/149‑1 (MQ=255)
                                   cTGGCGTTAGAGCTTGTTAACCCTGAACTGGATTTAGTCCGCCAGCTGGCGCTTAACGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGTTCCACAACGTAATGTTTTTTAACTATCTGATTAAt                                                                                                                   <  2:3174709/149‑1 (MQ=255)
                                   cTGGCGTTAGAGCTTGTTAACCCTGAACTGGATTTAGTCCGCCAGCTGGCGCTTAACGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGTTCCACAACGTAATGTTTTTTAACTATCTGATTAAt                                                                                                                   <  1:5060539/149‑1 (MQ=255)
                                     ggCGTTAGAGCTTGTTAACCCTGAACTGGATTTAGTCCGCCAGCTGGCGCTTAACGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGATCCACAACGTAATGTTTTTTAACTATCTGATTAATTg                                                                                                                 <  2:876997/149‑1 (MQ=255)
                                        gTTAGAGCTTGTTAACCCTGAACTGGATTTAGTCCGCCAGCTGGCGCTTAACGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGATCCACAACGTAATGTTTTTTAACTATCTGATTAATTgggg                                                                                                              >  1:4872226/1‑149 (MQ=255)
                                        gTTAGAGCTTGTTAACCCTGAACTGGATTTAGTCCGCCAGCTGGCGCTTAACGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGATCCACAACGTAATGTTTTTTAACTATCTGATTAATTgggg                                                                                                              <  2:2305978/149‑1 (MQ=255)
                                          tAGAGCTTGTTAACCCTGAACTGGATTTAGTCCGCCAGCTGGCGCTTAACGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGATCCACAACGTAATGTTTTTTAACTATCTGATTAATTGGGGAt                                                                                                            <  1:2077521/149‑1 (MQ=255)
                                           agagCTTGTTAACCCTGAACTGGATTTAGTCCGCCAGCTGGCGCTTAACGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGATCCACAACGTAATGTTTTTTAACTATCTGATTAATTGGGGATa                                                                                                           <  1:1116218/149‑1 (MQ=255)
                                           agagCTTGTTAACCCTGAACTGGATTTAGTCCGCCAGCTGGCGCTTAACGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGATCCACAACGTAATGTTTTTTAACTATCTGATTAATTGGGGATa                                                                                                           <  1:3713727/149‑1 (MQ=255)
                                            gagCTTGTTAACCCTGAACTGGATTTAGTCCGCCAGCTGGCGCTTAACGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGATCCACAACGTAATGTTTTTTAACTATCTGATTAATTGGGGATaa                                                                                                          >  2:4580353/1‑149 (MQ=255)
                                            gagCTTGTTAACCCTGAACTGGATTTAGTCCGCCAGCTGGCGCTTAACGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGATCCACAACGTAATGTTTTTTAACTATCTGATTAATTGGGGATaa                                                                                                          >  1:688999/1‑149 (MQ=255)
                                            gagCTTGTTAACCCTGAACTGGATTTAGTCCGCCAGCTGGCGCTTAACGGTAAGACGCACGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGATCCACAACGTAATGTTTTTTAACTATCTGATTAATTGGGGATaa                                                                                                          <  1:4571057/149‑1 (MQ=255)
                                              gCTTGTTAACCCTGAACTGGATTTAGTCCGCCAGCTGGCGCTTAACGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGATCCACAACGTAATGTTTTTTAACTATCTGATTAATTGGGGATAATc                                                                                                        >  2:346320/1‑149 (MQ=255)
                                               cTTGTTAACCCTGAACTGGATTTAGTCCGCCAGCTGGCGCTTAACGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGATCCACAACGTAATGTTTTTTAACTATCTGATTAATTGGGGATAATCa                                                                                                       >  2:2752653/1‑149 (MQ=255)
                                                 tGTTAACCCTGAACTGGATTTAGTCCGCCAGCTGGCGCTTAACGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGATCCACAACGTAATGTTTTTTAACTATCTGATTAATTGGGGATAATCAtt                                                                                                     >  2:4363960/1‑149 (MQ=255)
                                                  gTTAACCCTGAACTGGATTTAGTCCGCCAGCTGGCGCTTAACGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGTTCCACAACGTAATGTTTTTTAACTATCTGATTAATTGGGGATAATCATTc                                                                                                    <  1:2675959/149‑1 (MQ=255)
                                                   ttAACCCTGTACTTGATTTAGTCCGCCAGCTGGCGCTTAACGGTAAGTCGCGCGCAAGACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGATCCACAACGTAATGTTTTTTAACTATCTGATTAATTGGGGATAATCATTcc                                                                                                   <  1:1694508/149‑1 (MQ=255)
                                                   ttAACCCTGAACTGGATTTAGTCCGCCAGCTGGCGCTTAACGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGATCCACAACGTAATGTTTTTTAACTATCTGATTAATTGGGGATAATCATTcc                                                                                                   <  1:604307/149‑1 (MQ=255)
                                                     aaCCCTGAACTGGATTTAGTCCGCCAGCTGGCGCTTAACGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGATCCACAACGTAATGTTTTTTAACTATCTGATTAATTGGGGATAATCATTCCTg                                                                                                 <  2:4430496/149‑1 (MQ=255)
                                                     aaCCCTGAACTGGATTTAGTCCGCCAGCTGGCGCTTAACGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGATCCACAACGTAATGTTTTTTAACTATCTGATTAATTGGGGATAATCATTCCTg                                                                                                 >  1:4753876/1‑149 (MQ=255)
                                                      aCCCTGAACTGGATTTAGTCCGCCAGCTGGCGCTTAACGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGTTCCACAACGTAATGTTTTTTAACTATCTGATTAATTGGGGATAATCATTCCTGa                                                                                                >  1:3162841/1‑149 (MQ=255)
                                                      aCCCTGAACTGGATTTAGTCCGCCAGCTGGCGCTTAACGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGATCCACAACGTAATGTTTTTTAACTATCTGATTAATTGGGGATAATCATTCCTGa                                                                                                >  1:3673922/1‑149 (MQ=255)
                                                      aCCCTGAACTGGATTTAGTCCGCCAGCTGGCGCTTAACGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGATCCACAACGTAATGTTTTTTAACTATCTGATTAATTGGGGATAATCATTCCTGa                                                                                                <  2:4982128/149‑1 (MQ=255)
                                                       cccTGAACTGGATTTAGTCCGCCAGCTGGCGCTTAACGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGATCCACAACGTAATGTTTTTTAACTATCTGATTAATTGGGGATAATCATTCCTGAc                                                                                               >  1:2194360/1‑149 (MQ=255)
                                                       cccTGAACTGGATTTAGTCCGCCAGCTGGCGCTTAACGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGATCCACAACGTAATGTTTTTTAACTATCTGATTAATTGGGGATAATCATTCCTGAc                                                                                               >  1:2866706/1‑149 (MQ=255)
                                                       cccTGAACTGGATTTAGTCCGCCAGCTGGCGCTTAACGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGATCCACAAAGTAATGTTTTTTAACTATCTGATTAATTGGGGATAATCATTCCTGAc                                                                                               >  1:1808955/1‑149 (MQ=255)
                                                            aaCTGGATTTAGTCCGCCAGCTGGCGCTTAACGGTCAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGATCCACAACGTAATGTTTTTTAACTATCTGATTAATTGGGGATAATCATTCCTGACAGTGa                                                                                          >  2:599408/1‑149 (MQ=255)
                                                             aCTGGATTTAGTCCGCCAGCTGGCGCTTAACGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGTTCCACAACGTAATGTTTTTTAACTATCTGATTAATTGGGGATAATCATTCCTGACAGTGAg                                                                                         <  2:4117943/149‑1 (MQ=255)
                                                              cTGGATTTAGTCCGCCAGCTGGCGCTTAACGGTACGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGATCCACAACGTAATGTTTTTTAACTATCTGATTAATTGGGGATAATCATTCCTGACAGTGAGt                                                                                        >  2:1445535/1‑149 (MQ=255)
                                                                   tttAGTCCGCCAGCTGGCGCTTAACGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGATCCACAACGTAATGTTTTTTAACTATCTGATTAATTGGGGATAATCATTCCTGACAGTGAGTCCCCa                                                                                   >  2:3809338/1‑149 (MQ=255)
                                                                    ttAGTCCGCCAGCTGGCGCTTAACGGTAAGACGCGCGCAAGACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGTTCCACAACGTAATGTTTTTTAACTATCTGATTAATTGGGGATAATCATTCCTGACAGTGAGTCCCCaa                                                                                  <  1:1455755/149‑1 (MQ=255)
                                                                      aGTCCGCCAGCTGGCGCTTAACGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGATCCACAACGTAATGTTTTTTAACTATCTGATTAATTGGGGATAATCATTCCTGACAGTGAGTCCCCAATa                                                                                <  2:4805920/149‑1 (MQ=255)
                                                                      aGTCCGCCAGCTGGCGCTTAACGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGATCCACAACGTAATGTTTTTTAACTATCTGATTAATTGGGGATAATCATTCCTGACAGTGAGTCCCCAATa                                                                                >  2:1670128/1‑149 (MQ=255)
                                                                      aGTCCGCCAGCTGGCGCTTAACGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGATCCACAACGTAATGTTTTTTAACTATCTGATTAATTGGGGATAATCATTCCTGACAGTGAGTCCCCAATa                                                                                <  1:621442/149‑1 (MQ=255)
                                                                       gTCCGCCAGCTGGCGCTTAACGGTAAGACGCGCGCAATACGGGACCAAGCGATGAGAAAACTTGATGAGTTGTATTGATCCACAACGTAATGTTTTTTAACTATCTGATTAATTGGGGCTAATCATTCCTGACAGTGAGTCCCCAAGAc                                                                               >  2:3148550/1‑149 (MQ=255)
                                                                       gTCCGCCAGCTGGCGCTTAACGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGTTCCACAACGTAATGTTTTTTAACTATCTGATTAATTGGGGATAATCATTCCTGACAGTGAGTCCCCAATAc                                                                               <  2:4152188/149‑1 (MQ=255)
                                                                       gTCCGCCAGCTGGCGCTTAACGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGATCCACAACGTAATGTTTTTTAACTATCTGATTAATTGGGGATAATCATTCCTGACAGTGAGTCCCCAATAc                                                                               <  1:871498/149‑1 (MQ=255)
                                                                       gTCCGCCAGCTGGCGCTTAACGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGATCCACAACGTAATGTTTTTTAACTATCTGATTAATTGGGGATAATCATTCCTGACAGTGAGTCCCCAATAc                                                                               >  2:1804186/1‑149 (MQ=255)
                                                                         ccGCCAGCTGGCGCTTAACGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGATCCACAACGTAATGTTTTTTAACTATCTGATTAATTGGGGATAATCATTCCTGACAGTGAGTCCCCAATACCt                                                                             <  2:178639/149‑1 (MQ=255)
                                                                             cAGCTGGCGCTTAACGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGATCCACAACGTAATGTTTTTTAACTATCTGATTAATTGGGGATAATCATTCCTGACAGTGAGTCCCCAATACCTTGat                                                                         <  2:3274346/149‑1 (MQ=255)
                                                                              aGCTGGCGCTTAACGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGTTCCACAACGTAATGTTTTTTAACTATCTGATTAATTGGGGATAATCATTCCTGACAGTGAGTCCCCAATACCTTGata                                                                        >  1:875648/1‑149 (MQ=255)
                                                                              aGCTGGCGCTTAACGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGATCCACAACGTAATGTTTTTTAACTATCTGATTAATTGGGGATAATCATTCCTGACAGTGAGTCCCCAATACCTTGata                                                                        <  1:4186459/149‑1 (MQ=255)
                                                                               gCTGGCGCTTAACGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGATCCACAACGTAATGTTTTTTAACTATCTGATTAATTGGGGATAATCATTCCTGACAGTGAGTCCCCAATACCTTGatat                                                                       <  1:1433484/149‑1 (MQ=255)
                                                                                 tGGCGCTTAACGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGATCCACAACGTAATGTTTTTTAACTATCTGATTAATTGGGGATAATCATTCCTGACAGTGAGTCCCCAATACCTTGatatat                                                                     <  1:1912143/149‑1 (MQ=255)
                                                                                  ggCGCTTAACGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGATCCACAACGTAATGTTTTTTAACTATCTGATTAATTGGGGATAATCATTCCTGACAGTGAGTCCCCAATACCTTGATATAtt                                                                    >  1:1197028/1‑149 (MQ=255)
                                                                                         aaCGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGATCCACAACGTAATGTTTTTTAACTATCTGATTAATTGGGGATAATCATTCCTGACAGTGAGTCCCCAATACCTTGATATATTCTGAAtt                                                             <  1:2409332/149‑1 (MQ=255)
                                                                                          aCGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGATCCACAACGTAATGTTTTTTAACTATCTGATTAATTGGGGATAATCATTCCTGACAGTGAGTCCCCAATACCTTGATATATTCTGAAttt                                                            <  1:1678915/149‑1 (MQ=255)
                                                                                          aCGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGATCCACAACGTAATGTTTTTTAACTATCTGATTAATTGGGGATAATCATTCCTGACAGTGAGTCCCCAATACCGTGAGATATTCTGAAttt                                                            >  2:3397328/1‑149 (MQ=255)
                                                                                                aGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGATCCACAACGTAATGTTTTTTAACTATCTGATTAATTGGGGATAATCATTCCTGACAGTGAGTCCCCAATACCTTGATATATTCTGAATTTTTAAtt                                                      >  1:2833116/1‑148 (MQ=255)
                                                                                                 gACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGATCCACAACGTAATGTTTTTTAACTATCTGATTAATGGGGGATAATCATTCCTGACAGTGAGTCCCCAATACCTTGATATATTCTGAATTTTTAATGa                                                     >  1:2492057/1‑149 (MQ=255)
                                                                                                  aCGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGATCCACAACGTAATGTTTTTTAACTATCTGATTAATTGGGGATAATCATTCCTGACAGTGAGTCCCCAATACCTTGATATATTCTGAATTTTTAATGaa                                                    >  1:470913/1‑149 (MQ=255)
                                                                                                   cgcgcgCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGTTCCACAACGTAATGTTTTTTAACTATCTGATTAATTGGGGATAATCATTCCTGACAGTGAGTCCCCAATACCTTGATATATTCTGAATTTTTAATGaaa                                                   <  1:162973/149‑1 (MQ=255)
                                                                                                           aTACGGGAACACGCGATGAGAAAACTTGATGAGTTGTATTGTTCCACAACGTAATGTTTTTTAACTATCTGATTAATTGGGGATAATCATTCCTGACAGTGAGTCCCCAATACCTTGATATATTCTGAATTTTTAATGAAACGGCgtgt                                           <  1:2648789/149‑1 (MQ=255)
                                                                                                            tACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGATCCACAACGTAATGTTTTTTAACTATCTGATTAATTGGGGATAATCATTCCTGACAGTGAGTCCCCAATACCTTGATATATTCTGAATTTTTAATGAAACGGCGTGtt                                          >  1:3245175/1‑149 (MQ=255)
                                                                                                               gggAACAAGCTATGAGAAAACTTGATGAGTTGTATTGATCCACACCGTAATGTTTTTTAACTATCTGATTAATTGGGGATAATCATTCCTGACAGTGAGTCCCCAATACCTTGATATATTCTGAATTTTTAATGAAACGGCGTGTTGCg                                       <  2:2221286/149‑1 (MQ=255)
                                                                                                                ggAACAAGCGATGAGAAAACTTGATGAGTTGTATTGATCCACAACGTAATGTTTTTTAACTATCTGATTAATTGGGGATAATCATTCCTGACAGTGAGTCCCCAATACCTTGATAGATTCTGAATTTTTAATGAAACGGCGTGTTGCGa                                      >  1:1969898/1‑149 (MQ=255)
                                                                                                                   aCAAGCGATGAGAAAACTTGATGAGTTGTATTGATCCACAACGTAATGTTTTTTAACTATCTGATTAATTGGGGATAATCATTCCTGACAGTGAGTCCCCAATACCTTGATATATTCTGAATTTTTAATGAAACGGCGTGTTGCGatat                                   >  1:2729478/1‑149 (MQ=255)
                                                                                                                       gCGATGAGAAAACTTGATGAGTTGTATTGATCCACAACGTAATGTTTTTTAACTATCTGATTAATTGGGGATAATCATTCCTGACAGTGAGTCCCCAATACCTTGATATATTCTGAATTTTTAATGAAACGGCGTGTTGCGATATCTcc                               <  2:4687432/149‑1 (MQ=255)
                                                                                                                         gATGAGAAAACTTGATGAGTTGTATTGATCCACAACGTAATGTTTTTTAACTATCTGATTAATTGGGGATAATCATTCCTGACAGTGAGTCCCCAATACCTTGATATATTCTGAATTTTTAATGAAACGGCGTGTTGCGATATCTCCGt                             >  1:1000369/1‑149 (MQ=255)
                                                                                                                             agaAAACTTGATGAGTTGTATTGATCCACAACGTAATGTTTTTTAACTATCTGATTAATTGGGGATAATCATTCCTGACAGTGAGTCCCCAATACCTTGATATATTCTGAATTTTTAATGAAACGGCGTGTTGCGATATCTCCGTCAgg                         <  1:3884849/149‑1 (MQ=255)
                                                                                                                                 aaCTTGATGAGTTGTATTGATCCACAACGTAATGTTTTTTAACTATCTGATTAATTGGGGATAATCATTCCTGACAGTGAGTCCCCAATACCTTGATATATTCTGAATTTTTAATGAAACGGCGTGTTGCGATATCTCCGTCAGGGGaa                     <  2:2486991/149‑1 (MQ=255)
                                                                                                                                   cTTGATGAGTTGTATTGATCCACAACGTAATGTTTTTTAACTATCTGATTAATTGGGGATAATCATTCCTGACAGTGAGTCCCCAATACCTTGATATATTCTGAATTTTTAATGAAACGGCGTGTTGCGATATCTCCGTCAGGGGAAtt                   <  2:1278584/149‑1 (MQ=255)
                                                                                                                                    ttGATGAGTTGTATTGATCCACAACGTAATGTTTTTTAACTATCTGATTAATTGGGGATAATCATTCCTGACAGTGAGTCCCCAATACCTTGATATATTCTGAATTTTTAATGAAACGGCGTGTTGCGATATCTCCGTCAGGGGAATTg                  >  1:1457793/1‑149 (MQ=255)
                                                                                                                                      gatgaGTTGTATTGATCCACAACGTAATGTTTTTTAACTATCTGATTAATTGGGGATAATCATTCCTGACAGTGAGTCCCCAATACCTTGATATATTCTGAATTTTTAATGAAACGGCGTGTTGCGATATCTCCGTCAGGGGAATTGAt                >  2:2035281/1‑149 (MQ=255)
                                                                                                                                      gatgaGTTGTATTGATCCACAACGTAATGTTTTTTAACTATCTGATTAATTGGGGATAATCATTCCTGACAGTGAGTCCCCAATACCTTGATATATTCTGAATTTTTAATGAAACGGCGTGTTGCGATATCTCCGTCAGGGGAATTGAt                >  2:5182558/1‑149 (MQ=255)
                                                                                                                                       atgaGTTGTATTGTTCCACAACGTAATGTTTTTTAACTATCTGATTAATTGGGGATAATCATTCCTGACAGTGAGTCCCCAATACCTTGATATATTCTGAATTTTTAATGAAACGGCGTGTTGCGATATCTCCGTCAGGGGAATTGATg               >  2:1939601/1‑149 (MQ=255)
                                                                                                                                       atgaGTTGTATTGTTCCACAACGTAATGTTTTTTAACTATCTGATTAATTGGGGATAATCATTCCTGACAGTGAGTCCCCAATACCTTGATATATTCTGAATTTTTAATGAAACGGCGTGTTGCGATATCTCAGTCAGGGGAATTGATg               >  2:5146068/1‑149 (MQ=255)
                                                                                                                                       atgaGTTGTATTGATCCACAACGTAATGTTTTTTAACTATCTGATTAATTGGGGATAATCATTCCTGACAGTGAGTCCCCAATACCTTGATATATTCTGAATTTTTAATGAAACGGCGTGTTGCGATATCTCCGTCAGGGGAATTGATg               >  2:4031415/1‑149 (MQ=255)
                                                                                                                                          aGTTGTATTGTTCCACAACGTAATGTTTTTTAACTATCTGATTAATTGGGGATAATCATTCCTGACAGTGAGTCCCCAATACCTTGATATATTCTGAATTTTTAATGAAACGGCGTGTTGCGATATCTCCGTCAGGGGAATTGATGCAc            <  1:5158263/149‑1 (MQ=255)
                                                                                                                                            ttGTATTGATCCACAACGTAATGTTTTTTAACTATCTGATTAATTGGGGATAATCATTCCTGACAGTGAGTCCCCAATACCTTGATATATTCTGAATTTTTAATGAAACGGCGTGTTGCGATATCTCCGTCAGGGGAATTGATGCACCa          >  2:826683/1‑149 (MQ=255)
                                                                                                                                              gTATTGATCCACAACGTAATGTTTTTTAACTATCTGATTAATTGGGGATAATCATTCCTGACAGTGAGTCCCCAATACCTTGATATATTCTGAATTTTTAATGAGACGGCGTGTTGCGATATCTCCGTCAGGGGAATTGATGCACCATa        >  1:2628666/1‑149 (MQ=255)
                                                                                                                                                 ttGATCCACAACGTAATGTTTTTTAACTATCTGATTAATTGGGGATAATCATTCCTGACAGTGAGTCCCCAATACCTTGATATATTCTGAATTTTTAATGAAACGGCGTGTTGCGATATCTCCGTCAGGGGAATTGATGCACCATAgcg     >  1:2129814/1‑149 (MQ=255)
                                                                                                                                                   gATCCACAACGTAATGTTTTTTAACTATCTGATTAATTGGGGATAATCATTCCTGACAGTGAGTCCCCAATACCTTGATATATTCTGAATTTTTAATGAAACGGCGTGTTGCGATATCTCCGTCAGGGGAATTGATGCACCATAGCGCa   >  1:2748074/1‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
ATGTATTAAAGGCGAGGCTGAAACGTGATCCTTTGCTGGCGTTAGAGCTTGTTAACCCTGAACTGGATTTAGTCCGCCAGCTGGCGCTTAACGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGATCCACAACGTAATGTTTTTTAACTATCTGATTAATTGGGGATAATCATTCCTGACAGTGAGTCCCCAATACCTTGATATATTCTGAATTTTTAATGAAACGGCGTGTTGCGATATCTCCGTCAGGGGAATTGATGCACCATAGCGCAA  >  CP009273/1471559‑1471855

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: