| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,726,289 | A→T | 8.7% | P982P (CCA→CCT) | lhr → | putative ATP‑dependent helicase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,726,289 | 0 | A | T | 8.7% | 1122.2 / 71.6 | 320 | P982P (CCA→CCT) | lhr | putative ATP‑dependent helicase |
| Reads supporting (aligned to +/- strand): ref base A (155/136); new base T (12/16); total (167/153) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.26e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 322 total aligned reads displayed.
GAAGAGCGAAAGGTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACCGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGCTGCGTGATGCCCTCGGCGTACGACTACCAGAGTCATTGCCAGAGATTTATTTACATAGAGTCAGTTACCCGCTTCGCGACCTCTTTCTGCGCTAT > CP009273/1726141‑1726436 | gaagaGCGAAAGGTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACCGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCa > 2:2122653/1‑149 (MQ=255) gCGAAAGGTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACCGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCgat < 2:4394161/149‑1 (MQ=255) aaaGGTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACCGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCgatgat > 1:4557456/1‑149 (MQ=255) aaaGGTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACCGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCgatgat > 2:4684292/1‑149 (MQ=255) ggTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACCGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAg > 1:1003316/1‑149 (MQ=255) ggTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACCGTTGAAGACCTGACGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAg > 2:2036993/1‑149 (MQ=255) gTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACCGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGc < 2:2616427/149‑1 (MQ=255) gTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACCGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGc < 1:4152253/149‑1 (MQ=255) agaagGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACCGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGAc < 2:2725491/149‑1 (MQ=255) gaagGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACCGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACa > 1:1094374/1‑149 (MQ=255) gaagGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACCGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACa > 1:566711/1‑149 (MQ=255) gaagGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACCGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACa > 1:3288452/1‑149 (MQ=255) gaagGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACCGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACa > 2:4830505/1‑149 (MQ=255) gATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACCGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAg < 2:4096576/149‑1 (MQ=255) ttGTTCGACCTGCTGCGCGAACTGGGGCCAATGACCGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCg > 2:143854/1‑149 (MQ=255) ccTGCTGCGCGAACTGGGGCCAATGACCGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCt > 1:3532242/1‑149 (MQ=255) gctgcGCGAACTGGGGCCAATGACCGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTa < 1:1407196/149‑1 (MQ=255) gctgcGCGAACTGGGGCCAATGACCGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTa > 2:3672785/1‑149 (MQ=255) gcgAACTGGGGCCAATGACCGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGgat > 1:4840011/1‑149 (MQ=255) aaCTGGGGCCAATGACCGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGgatgat > 2:4566657/1‑149 (MQ=255) aaCTGGGGCCAATGACCGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGgatgat < 1:1828625/149‑1 (MQ=255) tGGGGCCAATGACCGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATgcc > 1:4363798/1‑149 (MQ=255) ggggCCAATGACCGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATgccg > 2:1693416/1‑149 (MQ=255) ggCCAATGACCGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATgccgcc < 2:527279/149‑1 (MQ=255) gCCAATGACCGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCa < 1:690848/149‑1 (MQ=255) ccAATGACCGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAg > 1:4916534/1‑149 (MQ=255) aaTGACCGTTGAAGACCTGGCGCGACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGc < 2:254443/149‑1 (MQ=255) aaTGACCGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCTGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGc > 2:2280700/1‑149 (MQ=255) aaTGACCGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGc < 1:2454362/149‑1 (MQ=255) aTGACCGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGCt > 1:3051204/1‑149 (MQ=255) aTGACCGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGCt < 2:4923729/149‑1 (MQ=255) gACCGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGCTGc > 2:2777044/1‑149 (MQ=255) gACCGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGCTGc > 1:3176881/1‑149 (MQ=255) ccGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGCTGCGt < 1:399710/149‑1 (MQ=255) cGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGCTGCGTg > 1:2638843/1‑149 (MQ=255) cGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGCTGCGTg > 2:1166836/1‑149 (MQ=255) cGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGCTGCGTg > 1:1568195/1‑149 (MQ=255) gTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGCTGCGTGa < 1:1226005/149‑1 (MQ=255) ttGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGCTGCGTGAt > 2:2314546/1‑149 (MQ=255) ttGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGCTGCGTGAt > 2:1969412/1‑149 (MQ=255) aGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGCTGCGTGATGccc < 2:1067944/149‑1 (MQ=255) ccTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGCTGCGTGATGCCCTCg > 1:631512/1‑149 (MQ=255) ggCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGCTGCGTGATGCCCTCGGCg > 1:5192524/1‑149 (MQ=255) gcAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGCTGCGTGATGCCCTCGGCGTAc > 2:3580504/1‑149 (MQ=255) gcAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGCTGCGTGATGCCCTCGGCGTAc < 2:4502317/149‑1 (MQ=255) aaCGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGCTGCGTGATGCCCTCGGCGTACGa < 1:2094753/149‑1 (MQ=255) aaCGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGCTGCGTGATGCCCTCGGCGTACGa > 2:1835046/1‑149 (MQ=255) cGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGCTGCGTGATGCCCTCGGCGTACGACt > 2:2444691/1‑149 (MQ=255) gCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGCTGCGTGATGCCCTCGGCGTACGACTAc > 2:1912956/1‑149 (MQ=255) aTACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGCTGCGTGATGCCCTCGGCGTACGACTACCa > 2:297140/1‑149 (MQ=255) aTACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGCTGCGTGATGCCCTCGGCGTACGACTACCa > 2:4304772/1‑149 (MQ=255) aGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGCTGCGTGATGCCCTCGGCGTACGACTACCAGAGt < 1:3465395/149‑1 (MQ=255) ggCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGCTGCGTGATGCCCTCGGCGTACGACTACCAGAGTc > 2:474322/1‑149 (MQ=255) ggCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGCTGCGTGATGCCCTCGGCGTACGACTACCAGAGTc < 2:3155398/149‑1 (MQ=255) cagcagTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCTTCTTGCCTGTATGGATGATGCCGCCAGGCTGCGTGATGCCCTCGGCGTACGACTACCAGAGTCAt < 2:377806/149‑1 (MQ=255) cagcagTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGCTGCGTGATGCCCTCGGCGTACGACTACCAGAGTCAt > 1:2292197/1‑149 (MQ=255) agcagTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGCTGCGTGATGCCCTCGGCGTACGACTACCAGAGTCAtt > 2:1538100/1‑149 (MQ=255) agcagTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGCTGCGTGATGCCCTCGGCGTACGACTACCAGAGTCAtt < 1:4696583/149‑1 (MQ=255) aaGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGCTGCGTGATGCCCTCGGCGTACGACTACCAGAGTCATTGCCagag > 2:4017338/1‑149 (MQ=255) agGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGCTGCGTGATGCCCTCGGCGTACGACTACCAGAGTCATTGCCAGAGatt > 1:2015612/1‑149 (MQ=255) gTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCTGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGCTGCGTGATGCCCTCGGCGTACGACTACCAGAGTCATTGCCAGAGattta > 1:2520927/1‑149 (MQ=255) ttGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCTGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGCTGCGTGATGCCCTCGGCGTACGACTACCAGAGTCATTGCCAGAGatttat < 2:1680826/149‑1 (MQ=255) gCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCTGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGCTGCGTGATGCCCTCGGCGTACGACTACCAGAGTCATTGCCAGAGatttattt < 1:341380/149‑1 (MQ=255) gCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGCTGCGTGATGCCCTCGGCGTACGACTACCAGAGTCATTGCCAGAGatttattt > 1:3404099/1‑149 (MQ=255) gCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCGTCCCTGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGCTGCGTGATGCCCTCGGCGTACGACTACCAGAGTCATTGCCAGAGatttattt < 1:45380/149‑1 (MQ=255) gtcgtATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGCTGCGTGATGCCCTCGGCGTACGACTACCAGAGTCATTGCCAGAGATTTATTTAc > 1:1622805/1‑149 (MQ=255) tcgtATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGCTGCGTGATGCCCTCGGCGTACGACTACCAGAGTCATTGCCAGAGATTTATTTACa < 2:3532242/149‑1 (MQ=255) tcgtATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGCTGCGTGATGCCCTCGGCGTACGACTACCAGAGTCATTGCCAGAGATTTATTTACa > 1:1850713/1‑149 (MQ=255) tcgtATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGCTGCGTGATGCCCTCGGCGTACGACTACCAGAGTCATTGCCAGAGATTTATTTACa > 2:1610192/1‑149 (MQ=255) tCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGCTGCGTGATGCCCTCGGCGTACGACTACCAGAGTCATTGCCAGAGATTTATTTACATagag > 2:3480546/1‑149 (MQ=255) tGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGCTGCGTGATGCCCTCGGCGTACGACTACCAGAGTCATTGCCAGAGATTTATTTACATAGAGTc > 2:4799366/1‑149 (MQ=255) tGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGCTGCGTGATGCCCTCGGCGTACGACTACCAGAGTCATTGCCAGAGATTTATTTACATAGAGTc > 1:888603/1‑149 (MQ=255) tGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGCTGCGTGATGCCCTCGGCGTACGACTACCAGAGTCATTGCCAGAGATTTATTTACATAGAGTc > 1:793572/1‑149 (MQ=255) tGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGCTGCGTGATGCCCTCGGCGTACGACTACCAGAGTCATTGCCAGAGATTTATTTACATAGAGTc > 1:4770004/1‑149 (MQ=255) ggAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGCTGCGTGATGCCCTCGGCGTACGACTACCAGAGTCATTGCCAGAGATTTATTTACATAGAGTCa < 1:3336833/149‑1 (MQ=255) ggAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGCTGCGTGATGCCCTCGGCGTACGACTACCAGAGTCATTGCCAGAGATTTATTTACATAGAGTCa > 1:3742346/1‑149 (MQ=255) gAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGCTGCGTGATGCCCTCGGCGTACGACTACCAGAGTCATTGCCAGAGATTTATTTACATAGAGTCAg > 2:2585054/1‑149 (MQ=255) gAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGCTGCGTGATGCCCTCGGCGTACGACTACCAGAGTCATTGCCAGAGATTTATTTACATAGAGTCAg < 1:3475638/149‑1 (MQ=255) aaaaTCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGCTGCGTGATGCCCTCGGCGTACGACTACCAGAGTCATTGCCAGAGATTTATTTACATAGAGTCAGt < 1:3694407/149‑1 (MQ=255) aaTCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGTATGATGCCGCCAGGCTGCGTGATGCCCTCGGCGTACGACTACCAGAGTCATTGCCAGAGATTTATTTACATAGAGTCAGTTa > 2:907544/1‑149 (MQ=255) aaTCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGCTGCGTGATGCCCTCGGCGTACGACTACCAGAGTCATTGCCAGAGATTTATTTACATAGAGTCAGTTa > 1:619056/1‑149 (MQ=255) tcttctTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGCTGCGTGATGCCCTCGGCGTACGACTACCAGAGTCATTGCCAGAGATTTATTTACATAGAGTCAGTTAcc < 1:3227184/149‑1 (MQ=255) ttcttGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGCTGCGTGATGCCCTCGGCGTACGACTACCAGAGTCATTGCCAGAGATTTATTTACATAGAGTCAGTTACCCg > 2:3092588/1‑149 (MQ=255) tcttGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGCTGCGTGATGCCCTCGGCGTACGACTACCAGAGTCATTGCCAGAGATTTATTTACATAGAGTCAGTTACCCGc < 1:4259660/149‑1 (MQ=255) cttGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGCTGCGTGATGCCCTCGGCGTACGACTACCAGAGTCATTGCCAGAGATTTATTTACATAGAGTCAGTTACCCGCt < 1:2364634/149‑1 (MQ=255) cttGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGCTGCGTGATGCCCTCGGCGTACGACTACCAGAGTCATTGCCAGAGATTTATTTACATAGAGTCAGTTACCCGCt < 1:5050236/149‑1 (MQ=255) cAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGCTGCGTGATGCCCTCGGCGTACGACTACCAGAGTCATTGCCAGAGATTTATTTACATAGAGTCAGTTACCCGCTTcgc < 2:19488/149‑1 (MQ=255) gTAAAACGAATCTTCCCTGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGCTGCGTGATGCCCTCGGCGTACGACTACCAGAGTCATTGCCAGAGATTTATTTACATAGAGTCAGTTACCCGCTTCGCGa < 1:2919738/149‑1 (MQ=255) aaaaCGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGCTGCGTGATGCCCTCGGCGTACGACTACCAGAGTCATTGCCAGAGATTTATTTACATAGAGTCAGTTACCCGCTTCGCGAcc < 1:1169195/149‑1 (MQ=255) aaCGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGCTGCGTGATGCCCTCGGCGTACGACTACCAGAGTCATTGCCAGAGATTTATTTACATAGAGTCAGTTACCCGCTTCGCGACctc > 2:3814109/1‑149 (MQ=255) aCGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGCTGCGTGATGCCCTCGGCGTACGACTACCAGAGTCATTGCCAGAGATTTATTTACATAGAGTCAGTTACCCGCTTCGCGACctct < 2:32566/149‑1 (MQ=255) aCGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGCTGCGTGATGCCCTCGGCGTACGACTACCAGAGTCATTGCCAGAGATTTATTTACATAGAGTCAGTTACCCGCTTCGCGACctct > 1:2842228/1‑149 (MQ=255) gAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGCTGCGTGATGCCCTCGGCGTACGACTACCAGAGTCATTGCCAGAGATTTATTTACATAGAGTCAGTTACCCGCTTCGCGACCTCttt > 1:4180441/1‑149 (MQ=255) aaTCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGCTGCGTGATGCCCTCGGCGTACGACTACCAGAGTCATTGCCAGAGATTTATTTACATAGAGTCAGTTACCCGCTTCGCGACCTCTTTc > 2:917468/1‑149 (MQ=255) aTCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGCTGCGTGATGCCCTCGGCGTACGACTACCAGAGTCATTGCCAGAGATTTATTTACATAGAGTCAGTTACCCGCTTCGCGACCTCTTTCt > 2:4360212/1‑149 (MQ=255) aTCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGCTGCGTGATGCCCTCGGCGTACGACTACCAGAGTCATTGCCAGAGATTTATTTACATAGAGTCAGTTACCCGCTTCGCGACCTCTTTCt > 1:1488144/1‑149 (MQ=255) aTCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGCTGCGTGATGCCCTCGGCGTACGACTACCAGAGTCATTGCCAGAGATTTATTTACATAGAGTCAGTTACCCGCTTCGCGACCTCTTTCt < 2:5124697/149‑1 (MQ=255) tCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGCTGCGTGATGCCCTCGGCGTACGACTACCAGAGTCATTGCCAGAGATTTATTTACATAGAGTCAGTTACCCGCTTCGCGACCTCTTTCTg > 2:1306021/1‑149 (MQ=255) cTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGCTGCGTGATGCCCTCGGCGTACGACTACCAGAGTCATTGCCAGAGAGTTATTTACATAGAGTCAGTTACCCGCTTCGCGACCTCTTTCTgc > 1:3573308/1‑149 (MQ=255) cAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGCTGCGTGATGCCCTCGGCGTACGACTACCAGAGTCATTGCCAGAGATTTATTTACATAGAGTCAGTTACCCGCTTCGCGACCTCTTTCTGCGCTAt > 2:1181939/1‑149 (MQ=255) | GAAGAGCGAAAGGTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACCGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGCTGCGTGATGCCCTCGGCGTACGACTACCAGAGTCATTGCCAGAGATTTATTTACATAGAGTCAGTTACCCGCTTCGCGACCTCTTTCTGCGCTAT > CP009273/1726141‑1726436 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |