| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,824,998 | G→T | 11.0% | R9R (CGA→AGA) | astA ← | arginine succinyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,824,998 | 0 | G | T | 11.0% | 1142.8 / 87.8 | 314 | R9R (CGA→AGA) | astA | arginine succinyltransferase |
| Reads supporting (aligned to +/- strand): ref base G (143/136); new base T (19/16); total (162/152) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.58e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 317 total aligned reads displayed.
TAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAGTGTTCGCAAGCAGCTGCAAAGCGATCCAGTCCGGTCGTCACCTCTTCTTCGCTGACATTGAGCGCAGGCGCAAAACGCACCACGTTGCCACCCGCAATCAGTA > CP009273/1824850‑1825146 | aGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGc > 1:3292351/1‑149 (MQ=255) aGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGc > 2:714575/1‑149 (MQ=255) cccTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTc < 1:1176961/149‑1 (MQ=255) ccTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCa > 2:2061568/1‑149 (MQ=255) tGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAAc > 1:681692/1‑149 (MQ=255) cTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACgg > 2:2341131/1‑149 (MQ=255) cACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCTCTCAACGGGa > 1:3449067/1‑149 (MQ=255) cACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGa < 2:1258525/149‑1 (MQ=255) aCTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGAc < 2:3454106/149‑1 (MQ=255) cTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACg > 1:3164578/1‑149 (MQ=255) gggCAGTTCGCCTTGCCAGGTTTTGATTGCCCGTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCTCTCAACGGGACGGATGa < 2:446473/149‑1 (MQ=255) gCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGAcc < 2:2145128/149‑1 (MQ=255) aGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCTCTCAACGGGACGGATGACcat > 2:4459987/1‑149 (MQ=255) aGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCGACGGGACGGATGACcat > 1:1566543/1‑149 (MQ=255) aGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACcat < 1:262159/149‑1 (MQ=255) aGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACcat < 1:4227353/149‑1 (MQ=255) gTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACcatc > 1:2164462/1‑149 (MQ=255) gTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACcatc < 2:5038651/149‑1 (MQ=255) ccTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCatgat > 2:4275758/1‑149 (MQ=255) ttGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCAtgatga < 1:4371450/149‑1 (MQ=255) ttGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCAtgatga > 1:4563468/1‑149 (MQ=255) tGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGaa < 2:3305991/149‑1 (MQ=255) gCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAAc > 1:2521511/1‑149 (MQ=255) gCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAAc < 1:2936449/149‑1 (MQ=255) ccAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAAcc < 1:960368/149‑1 (MQ=255) ccAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAAcc > 2:2773396/1‑149 (MQ=255) cAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCTCTCAACGGGACGGATGACCATCATGATGAACCt < 1:4915030/149‑1 (MQ=255) aGGTTTTGAGTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTc < 1:2228616/149‑1 (MQ=255) tttGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCt > 1:1291925/1‑149 (MQ=255) tGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCTCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACaaa < 2:764671/149‑1 (MQ=255) tGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACaaa < 1:2387206/149‑1 (MQ=255) tGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACaaa < 2:3572647/149‑1 (MQ=255) ccTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtg > 1:3242092/1‑149 (MQ=255) cTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgt < 2:3685736/149‑1 (MQ=255) gATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAGTGTTCGCa < 1:3039998/149‑1 (MQ=255) tACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAGTGTTCGCAag > 1:906568/1‑149 (MQ=255) tACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAGTGTTCGCAag > 1:16675/1‑149 (MQ=255) gcgcCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAGTGTTCGCAagcag > 1:4845572/1‑149 (MQ=255) cgcCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAGTGTTCGCAagcagc < 2:4695621/149‑1 (MQ=255) gcCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAGTGTTCGCAAGCAGCt < 1:123332/149‑1 (MQ=255) gAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAGTGTTCGCAAGCAGCTGCa > 1:1981229/1‑149 (MQ=255) aaGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAGTGTTCGCAAGCAGCTGCaaa > 2:39435/1‑149 (MQ=255) aGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAGTGTTCGCAAGCAGCTGCAAAg < 1:108446/149‑1 (MQ=255) aGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAGTGTTCGCAAGCAGCTGCAAAg > 2:2243430/1‑149 (MQ=255) gCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAGTGTTCGCAAGCAGCTGCAAAGc < 1:3868551/149‑1 (MQ=255) gCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAGTGTTCGCAAGCAGCTGCAAAGc > 2:3632641/1‑149 (MQ=255) gCGTGGCTTCATGGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAGTGTTCGCAAGCAGCTGCAAAGc < 2:3264048/149‑1 (MQ=255) gTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAGTGTTCGCAAGCAGCTGCAAAGCGa > 2:263005/1‑149 (MQ=255) gTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAGTGTTCGCAAGCAGCTGCAAAGCGa < 2:1422392/149‑1 (MQ=255) ggCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAGTGTTCGCAAGCAGCTGCAAAGCGATc < 2:2482266/149‑1 (MQ=255) gCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCTCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAGTGTTCGCAAGCAGCTGCAAAGCGATcc > 2:405513/1‑149 (MQ=255) gCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAGTGTTCGCAAGCAGCTGCAAAGCGATcc < 2:4645104/149‑1 (MQ=255) aTTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAGTGTTCGCACGCAGCTGCAAAGCGATCCAGTcc > 2:1443351/1‑149 (MQ=255) aTTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAGTGTTCGCAAGCAGCTGCAAAGCGATCCAGTcc < 1:591506/149‑1 (MQ=255) aTTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAGTGTTCGCAAGCAGCTGCAAAGCGATCCAGTcc > 2:787976/1‑149 (MQ=255) ttGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAGTGTTCGCAAGCAGCTGCAAAGCGATCCAGTCCg < 1:741448/149‑1 (MQ=255) ggCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAGTGTTCGCAAGCAGCTGCAAAGCGATCCAGTCCGgt < 2:1848804/149‑1 (MQ=255) ggCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAGTGTTCGCAAGCAGCTGCAAAGCGATCCAGTCCGgt < 2:531523/149‑1 (MQ=255) ggAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAGTGTTCGCAAGCAGCTGCAAAGCGATCCAGTCCGgtcgtc > 2:1162504/1‑149 (MQ=255) gACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAGTGTTCGCAAGCAGCTGCAAAGCGATCCAGTCCGGTCGTCACctct > 2:2713302/1‑149 (MQ=255) cGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAGTGTTCGCAAGCAGCTGCAAAGCGATCCAGTCCGGTCGTCACCtcttc > 2:1629141/1‑149 (MQ=255) gTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCTCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAGTGTTCGCAAGCAGCTGCAAAGCGATCCAGTCCGGTCGTCACCtcttct > 1:320465/1‑149 (MQ=255) gTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAGTGTTCGCAAGCAGCTGCAAAGCGATCCAGTCCGGTCGTCACCtcttct < 2:1555440/149‑1 (MQ=255) tCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAGTGTTCGCAAGCAGCTGCAAAGCGATCCAGTCCGGTCGTCACCTcttctt < 2:2898013/149‑1 (MQ=255) cAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAGTGTTCGCAAGCAGCTGCAAAGCGATCCAGTCCGGTCGTCACCTCttcttc < 1:2343143/149‑1 (MQ=255) cAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAGTGTTCGCAAGCAGCTGCAAAGCGATCCAGTCCGGTCGTCACCTCttcttc < 1:1331145/149‑1 (MQ=255) aGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAGTGTTCGCAAGCAGCTGCAAAGCGATCCAGTCCGGTCGTCACCTCTTCTTCg > 1:4222509/1‑149 (MQ=255) gccgccCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAGTGTTCGCAAGCAGCTGCAAAGCGATCCAGTCCGGTCGTCACCTCTTCTTCGCTGAc < 2:1782506/149‑1 (MQ=255) gccgccCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAGTGTTCGCAAGCAGCTGCAAAGCGATCCAGTCCGGTCGTCACCTCTTCTTCGCTGAc > 2:1973351/1‑149 (MQ=255) ccgccCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAGTGTTCGCAAGCAGCTGCAAAGCGATCCAGTCCGGTCGTCACCTCTTCTTCGCTGACa < 2:4901777/149‑1 (MQ=255) cgccCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAGTGTTCGCAAGCAGCTGCAAAGCGATCCAGTCCGGTCGTCACCTCTTCTTCGCTGACAt < 1:4172795/149‑1 (MQ=255) ccGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGGTGAACCTCGGCTAACAAAGTGTTCGCAAGCAGCTGCAAAGCGATCCAGTCCGGTCGTCACCTCTTCTTCGCTGACATTGa > 2:1577496/1‑149 (MQ=255) ccGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAGTGTTCGCAAGCAGCTGCAAAGCGATCCAGTCCGGTCGTCACCTCTTCTTCGCTGACATTGa > 1:1071932/1‑149 (MQ=255) gTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAGTGTTCGCAAGCAGCTGCAAAGCGATCCAGTCCGGTCGTCACCTCTTCTTCGCTGACATTGAgc < 2:2521511/149‑1 (MQ=255) tttGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAGTGTTCGCAAGCAGCTGCAAAGCGATCCAGTCCGGTCGTCACCTCTTCTTCGCTGACATTGAgcgc < 1:4162099/149‑1 (MQ=255) ttGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAGTGTTCGCAAGCAGCTGCAAAGCGATCCAGTCCGGTCGTCACCTCTTCTTCGCTGACATTGAGCGCa < 2:4976475/149‑1 (MQ=255) ttGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAGTGTTCGCAAGCAGCTGCAAAGCGATCCAGTCCGGTCGTCACCTCTTCTTCGCTGACATTGAGCGCa > 2:3081541/1‑149 (MQ=255) tGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAGTGTTCGCAAGCAGCTGCAAAGCGATCCAGTCCGGTCGTCACCTCTTCTTCGCTGACATTGAGCGCAg < 1:4728322/149‑1 (MQ=255) tGGCAAGCTGCATCAGCGCCGAGACATCTGATCTCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAGTGTTCGCAAGCAGCTGCAAAGCGATCCAGTCCGGTCGTCACCTCTTCTTCGCTGACATTGAGCGCAGgcg > 2:5160538/1‑149 (MQ=255) gCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAGTGTTCGCAAGCAGCTGCAAAGCGATCCAGTCCGGTCGTCACCTCTTCTTCGCTGACATTGAGCGCAGGCGCa > 1:862737/1‑149 (MQ=255) gCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAGTGTTCGCAAGCAGCTGCAAAGCGATCCAGTCCGGTCGTCACCTCTTCTTCGCTGACATTGAGCGCAGGCGCAAAACGca < 2:3766701/149‑1 (MQ=255) cATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAGTGTTCGCAAGCAGCTGCAAAGCGATCCAGTCCGGTCGTCACCTCTTCTTCGCTGACATTGAGCGCAGGCGCAAAACGcac > 2:838173/1‑149 (MQ=255) tCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAGTGTTCGCAAGCAGCTGCAAAGCGATCCAGTCCGGTCGTCACCTCTTCTTCGCTGACATTGAGCGCAGGCGCAAAACGcacca > 1:4506073/1‑149 (MQ=255) tCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAGTGTTCGCAAGCAGCTGCAAAGCGATCCAGTCCGGTCGTCACCTCTTCTTCGCTGACATTGAGCGCAGGCGCAAAACGcacca > 1:3793644/1‑149 (MQ=255) cAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAGTGTTCGCAAGCAGCTGCAAAGCGATCCAGTCCGGTCGTCACCTCTTCTTCGCTGACATTGAGCGCAGGCGCAAAACGcaccac < 2:704129/149‑1 (MQ=255) gcgcCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAGTGTTCGCAAGCAGCTGCAAAGCGATCCAGTCCGGTCGTCACCTCTTCTTCGCTGACATTGAGCGCAGGCGCAAAACGCACCACGt > 1:3560861/1‑149 (MQ=255) gcgcCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAGTGTTCGCAAGCAGCTGCAAAGCGATCCAGTCCGGTCGTCACCTCTTCTTCGCTGACATTGAGCGCAGGCGCAAAACGCACCACGt > 1:2893836/1‑149 (MQ=255) ccGAGACATCTGATCTCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAGTGTTCGCAAGCAGCTGCAAAGCGATCCAGTCCGGTCGTCACCTCTTCTTCGCTGACATTGAGCGCAGGCGCAAAACGCACCACGTTGc < 1:270536/149‑1 (MQ=255) cGAGACATCTGATCTCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAGTGTTCGCAAGCAGCTGCAAAGCGATCCAGTCCGGTCGTCACCTCTTCTTCGCTGACCTTGAGCGCAGGCGCAAAACGCACCACGTTGcc > 1:921856/1‑149 (MQ=255) cGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAGTGTTCGCAATCAGCTGCAAAGCGATCCAGTCCGGTCGTCACCTCTTCTTCGCTGACATTGAGCGCAGGCGCAAAACGCACCACGTTGcc < 1:2046518/149‑1 (MQ=255) gagaCATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAGTGTTCGCAAGCAGCTGCAAAGCGATCCAGTCCGGTCGTCACCTCTTCTTCGCTGACATTGAGCGCAGGCGCAAAACGCACCACGTTGCCa > 1:3980049/1‑149 (MQ=255) gagaCATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAGTGTTCGCAAGCAGCTGCAAAGCGATCCAGTCCGGTCGTCACCTCTTCTTCGCTGACATTGAGCGCAGGCGCAAAACGCACCACGTTGCCa > 2:675201/1‑149 (MQ=255) agaCATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAGTGTTCGCAAGCAGCTGCAAAGCGATCCAGTCCGGTCGTCACCTCTTCTTCGCTGACATTGAGCGCAGGCGCAAAACGCACCACGTTGCCAc < 1:1859693/149‑1 (MQ=255) agaCATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAGTGTTCGCAAGCAGCTGCAAAGCGATCCAGTCCGGTCGTCACCTCTTCTTCGCTGACATTGAGCGCAGGCGCAAAACGCACCACGTTGCCAc > 2:2952296/1‑149 (MQ=255) gATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAGTGTTCGCAAGCAGCTGCAAAGCGATCCAGTCCGGTCGTCACCTCTTCTTCGCTGACATTGAGCGCAGGCGCAAAACGCACCACGTTGCCACCCGCAATc > 1:142538/1‑149 (MQ=255) gATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAGTGTTCGCAAGCAGCTGCAAAGCGATCCAGTCCGGTCGTCACCTCTTCTTCGCTGACATTGAGCGCAGGCGCAAAACGCACCACGTTGCCACCCGCAATc < 1:3721015/149‑1 (MQ=255) aTCTCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAGTGTTCGCAAGCAGCTGCAAAGCGATCCAGTCCGGTCGTCACCTCTTCTTCGCTGACATTGAGCGCAGGCGCAAAACGCACCACGTTGCCACCCGCAATCa < 1:1792289/149‑1 (MQ=255) aTCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAGTGTTCGCAAGCAGCTGCAAAGCGATCCAGTCCGGTCGTCACCTCTTCTTCGCTGACATTGAGCGCAGGCGCAAAACGCACCACGTTGCCACCCGCAATCa < 1:5077407/149‑1 (MQ=255) gCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAGTGTTCGCAAGCAGCTGCAAAGCGATCCAGTCCGGTCGTCACCTCTTCTTCGCTGACATTGAGCGCAGGCGCAAAACGCACCACGTTGCCACCCGCAATCAGTa < 1:2954257/149‑1 (MQ=255) gCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAGTGTTCGCAAGCAGCTGCAAAGCGATCCAGTCCGGTCGTCACCTCTTCTTCGCTGACATTGAGCGCAGGCGCAAAACGCACCACGTTGCCACCCGCAATCAGTa > 2:4224994/1‑149 (MQ=255) | TAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAGTGTTCGCAAGCAGCTGCAAAGCGATCCAGTCCGGTCGTCACCTCTTCTTCGCTGACATTGAGCGCAGGCGCAAAACGCACCACGTTGCCACCCGCAATCAGTA > CP009273/1824850‑1825146 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |