| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,170,724 | G→T | 25.0% | intergenic (‑41/+267) | gatY ← / ← fbaB | D‑tagatose 1,6‑bisphosphate aldolase 2, catalytic subunit/fructose‑bisphosphate aldolase class I |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,170,724 | 0 | G | T | 25.0% | 370.8 / 24.5 | 214 | intergenic (‑41/+267) | gatY/fbaB | D‑tagatose 1,6‑bisphosphate aldolase 2, catalytic subunit/fructose‑bisphosphate aldolase class I |
| Reads supporting (aligned to +/- strand): ref base G (66/81); new base T (38/23); total (104/110) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.25e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 220 total aligned reads displayed.
TCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATA > CP009273/2170577‑2170872 | accaccACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTTGATTTCAAAATATAATTAAat > 1:2791061/1‑149 (MQ=255) ccaccaCTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTAGATTTCTAAATAtaatttaatt > 2:3121645/1‑149 (MQ=255) ccaccaCTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATTAAatt > 2:1214340/1‑149 (MQ=255) caccacTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTTTTTTCGATTTAAAAATATAAAGAAataa > 1:171045/1‑147 (MQ=255) caccacTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGATTTAAAAATATAATGTAatta > 1:2975628/1‑149 (MQ=255) caccacTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGATTTAAAAATATAAAGAAaata > 1:374466/1‑149 (MQ=255) cacTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTTTTTTTGAAAAAATAATTTAATTAttt > 1:4408991/1‑149 (MQ=255) cTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGt < 2:3370265/149‑1 (MQ=255) cTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGt < 2:2187812/149‑1 (MQ=255) cTTGCATCGTTTCGAGATTGTGAATATAGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGt < 1:665690/149‑1 (MQ=255) tCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTAGATTTCAAAAAAAAAATAAAATTTTTTTTTTTaa > 1:5110249/1‑149 (MQ=255) tCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGAATTCAAAATATAAAGAAAATATTTTTTTTTaa > 1:3425589/1‑149 (MQ=255) tCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGATATAAAAAAATAAATAAATTAATTTTTTTTaa > 1:852405/1‑149 (MQ=255) gTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAat < 2:1340910/149‑1 (MQ=255) gTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTTTTTTGGATTTAAAAAAAAAAAGAAAATATtttttttttatt > 1:1814065/1‑145 (MQ=255) tttCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTAAAAAAAAAAATAAAATATTTTTTTTTTAata > 1:1922983/1‑149 (MQ=255) ttCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAatat < 2:2476782/149‑1 (MQ=255) tCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATc < 1:2500430/149‑1 (MQ=255) agaTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCgag < 2:4152679/149‑1 (MQ=255) gaTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCgaga < 2:3187392/149‑1 (MQ=255) gaTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTCGATTTAAAAATATAATTAAATTATTTTTTTTTTAATATAgaga > 2:2358445/1‑149 (MQ=255) aTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTTTTTTTTAATATAGAGAt > 2:4584286/1‑149 (MQ=255) aTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTAAAAATATAAATAAATTATTTTTTTTTAAATATAGAGAt > 2:4615913/1‑149 (MQ=255) ttGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATa < 1:4798184/149‑1 (MQ=255) ttGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTAAAAATATAATGAAATTATTTGTTTTTAAATATAGAGATa > 2:2888476/1‑149 (MQ=255) gtgAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAAc < 1:2855320/149‑1 (MQ=255) gtgAATAGTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAAc < 2:4236056/149‑1 (MQ=255) atatTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGGTTTAAAAAAAAAAAGAAAATAATTTTTTTTAAATATAGACAGAAccaac > 1:2334444/1‑145 (MQ=255) tatTGACTGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATca < 2:3451660/149‑1 (MQ=255) atTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATcac < 2:4624176/149‑1 (MQ=255) ttGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATcaca < 2:2759379/149‑1 (MQ=255) aTGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTGGATTTAAAAAAATAATTAAATTATTTTTTTTTTAATATATATATAAAGATAACaaaaa > 1:1053007/1‑149 (MQ=255) tGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAAc < 1:5083081/149‑1 (MQ=255) ccGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGa < 1:4212126/149‑1 (MQ=255) ccGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGa < 1:336491/149‑1 (MQ=255) ccGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGa < 2:4254276/149‑1 (MQ=255) cGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACTTTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACTATCACAAAAACGAc < 2:1500352/149‑1 (MQ=255) cGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCGGCTTTGTCGATACCACGCACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGAc < 2:3349459/149‑1 (MQ=255) ggAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGATTTAAAAATAAAATTAAAATAATTTTTTTTAAATATCTATATAAAGATAAAAAAAAcaaaa > 1:1054950/1‑145 (MQ=255) ccGCATAACCGCGGCGGTGTGGGTTGTTCAGCTTCTGATTGGTCTATACCAGGTACTTTTTCTTATCCTGTGTTTTGTTTTCTATTTCAAAATATATTGAATTTTTTTTTTTTTAATTTTGGATATAACGATCACAAAAACGACAatat < 1:4285544/149‑1 (MQ=255) cGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACAGTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAAAATAATTAAAATATTTTTTTTTAAATATAGAGATAAAGATCACAAAAAACACAAAATg > 2:3597970/1‑149 (MQ=255) gCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATTAAATTATTTTTTTTTAAATATAGAGATAACGATCACAAAAAAGACAatatta > 2:2561730/1‑147 (MQ=255) gCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTCGATTTAAAAAAATAATGAAATTATTTGTTTTTAAATATAGAGATCAAGATCACAAAAACGCCCCTATGa > 2:4434774/1‑149 (MQ=255) aTAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTAAAAATATAATTAAATTATTTTTTTTTAAATATAGAGATAAAGATAACAAAAACCACAAAATTaaa > 2:2023810/1‑149 (MQ=255) aaCCGCCGCGGTGTGGGTTGTTCAGCATCTGATTTGTCTATACCACTTAAATTTTCATATCCTGTCTTTTTTTTTCTATTTAAAAATATATTTAATTTATTTTTTTTTAAATATCGAGATAACTATCAAAAAAACGACAATATGAAAat < 1:305825/149‑1 (MQ=255) ccgccgCGCTGTGCTTTTTTCAGAATCTGCTTTGTCTATACCACGTAAATTTTAATATCCTGTAGTTTGTTTTCTATTTAAAAATATAATCAATTTATTTTTTTTTAAATATCTATATAACGATCACAAAAACGACAATATGAAAatta < 2:137869/149‑1 (MQ=255) gccgcGCTGTGCGTTTTTCAGCATCTGCTTTGTCTATACCACGAACATTTTCATATCCGGTCGTTTTTTTACTATTTAAAAATATAATTAATTTTTTTTTTTTTAAATTTCGATATAACGATAACAAAAACGACAATATGAAAattatt < 1:1023840/149‑1 (MQ=255) gccgcGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTCGATTTGAAAATATAAAGAAATTATTTTTTTTTTAATATAGAGATAAAGATCACAAAAAACAAAAAATTAAAaatatt > 1:1235201/1‑149 (MQ=255) gccgcGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGATTTAAAAAAATAATGAAATTATTTTTTTTTAAATATCGAGATAAAGATAACAAAAACGACAATATTAAAaatatt > 2:1115441/1‑149 (MQ=255) cgcTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCgag < 2:3209185/149‑1 (MQ=255) gcTGTGCGTTTTTCAGCATCTGCTTTGTCGATACCACGTAATTTTTCATATCCTGTCGTTTGTTTTCGATTACAAAATATAATGAATTTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCgagg < 2:1441089/149‑1 (MQ=255) gcTGTGCGTTGTTCAGCATCTGCTTTGTCTATACCCCTTACTTTTTAATAGCCTGTCGTTTTTTTTCTATTTCAAAATATAATTAATTTATTTGTTTTTAAATATCTATATAACGATCACAAACACGACAATATGAAAATTATTCgagg < 2:18892/149‑1 (MQ=255) gcTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATTAAATTATTTTTTTTTAAATATAGAGATAAAGATCAAAAAAAAGAAAATATTAAAAATATTAgagg > 2:2681525/1‑149 (MQ=255) tgtgCGTTGTGCAGCATCTGCTTTGTCGAAACCCCGTACATGTTCATATCCTGACGTTTGTTTTCGATTACAAAATATAATTAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCgaggag < 2:2729428/149‑1 (MQ=255) tgCGTTTTTCAGCAGCTGATTTGTCTATACCACGTACTTTTTCATACCCTGTCTTTTGTTTTCTATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCTAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTg < 2:2931138/149‑1 (MQ=255) tgCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTATATTTGAAAATATAATTAAAATATTTTTTTTTTAATTTAGATAGAACGAAAAAAAAAAACACAAAATTAAAAATATTAGTGGAGTg > 1:2720103/1‑149 (MQ=255) gCGTTGTGCAGCATCTGCTTTGTCGATACCACGTAAATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTTTTTTTAAATATCGAGATAACGATCAAAAAAACGACAATATGAAAATTATTCGAGGAGTGa < 2:2423387/149‑1 (MQ=255) gttgttCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTAAAAAAAAAAATAAATTATTTTTTTTTTAATATAAAGATAAAGATAACAAAAAACAAAAAATTAAAAAAATTAGAGGAGTGaaa > 1:2929475/1‑149 (MQ=255) ttttaccgCATCTGCTTGGTCGATCCCCCGTAATTTTTAATATCCTGTGGTTTGTTTTCGATTTAAAAATATAATTAAATTTTTTTTTTTAAAATATCGATATAACTATAACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAg < 1:134700/142‑1 (MQ=255) ttgttCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTTAAAATATAATGTAAATATTTTTTTTTTAATATGGAGATAAAGATAACAAAAAAGACAAAATTGAAATTATTAGAGGGGTGgaat > 2:2456620/1‑148 (MQ=255) gttCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTCGATTTGAAAAAATAATTAAATTATTTGTTTTTAAATATAGAGATAACGGTCACAAAAAACAAAATATTAAAATTATTAGAGGTGTGaaattc > 1:1167497/1‑146 (MQ=255) aTCTGCTTTGTCTATACCCCGACCTTTTTCATATCAGGTCGTTTTTTTTCGATTTAAAAATATAATGAAATTATTTGTTTTTAAATATCGATATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCaaaaaaa < 2:4075403/149‑1 (MQ=255) tCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAAAATAAATAAATTATTTTTTTTTAAATATAGAGATAACCATCACAAAAACCACAATATGAAAAATATTAGAGGCGTGTAAGGCaaaaaaaa > 2:142939/1‑148 (MQ=255) tGCTTTGTCTAAACACCTTAATTTTTCATAGCGTGTTTTTTGTTTTCTATTTAAAAATATAATTAATTTTTTTTTTTTTAAATATCGATATAACTATAAAAAAAACGAAAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACgg < 1:155094/149‑1 (MQ=255) gCTTTGTCGATACCACGTACATATTAATATCCTGTCGTTTGTTTTAGATTTCAAAAAAAAATTAAATTATTTTTTTTTAAAAATCGATATAAAGATCAAAAAAAAGAAAAAATTAAAATTATTATATGAGTGAAAGGaaaaaaaaagtc > 2:2564907/1‑145 (MQ=255) ccACGTACATTTTCATATCCTGTCGTGTGTTTTAGATTTAAAAAAATAAATAAAATAATTTTTTTTTAATATAGAGATAACGATAAAAAAAAACACAAAATTAAAAAAATTATATGGGTGAAATGCAAAAAAAAAGCCAACCCATAggg > 1:3904573/1‑149 (MQ=255) cACGTAAATTTACATATCCTGTCGTTTTTTTTATATTTAAAAAAATAATCAAATTATTTTTTTTTAAATATCGTTAAAACTATAAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGa < 1:4139335/149‑1 (MQ=255) aCGTACATTTTCATATCCTGTCGTGTGTTTTCGATTTCAAAATATAAATAAAATAATTTTTTTTAAATATAAAGATAAACATAACAAAAAACACAATATTAAAAATATTAGAGGGGTGAAATGCAAAAAAAAAGCCACCCCCGAGGGaa > 2:4019367/1‑149 (MQ=255) aattttgCATATCCTGTCGTTTGTTTTCGTTTTCAAATTATAATTAAATTATTTGTTTTTAATTTTCGTGATAACGATCACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCg < 1:4207826/146‑1 (MQ=255) aaTTTTCTTACCCTGTGTTTTGTTTTCTATTAAAAAATATATTTAATTTTTTTTTTTTAAAATTGCGATAAACCTAAAAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGt < 1:3151604/148‑1 (MQ=255) aTTTTCATATCCTGTGTTTTGTTTTCTATTACAAAATATAATGAATTTATTTTTTTTTAAATATCGATATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTa < 1:4701516/149‑1 (MQ=255) aTTTACATATCCTGTCTTTTTTTTTCTATTTCAAAATATAATGAAATTATTTTTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTa < 2:3855353/149‑1 (MQ=255) tttCATATCCTGTCGTTTTTTTTCTATTTAAAAATATAATGAAATTATTTTTTTTTAAATATCGAGATCACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGc < 1:395380/149‑1 (MQ=255) cATATCCTGTCTTTTGTTTTCTATTTAAAAATATAATGAAATTATTTTTTTTTAAATATCGATATAACTATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCaaa < 2:1053007/149‑1 (MQ=255) cATATCCTGTCGTTTTTTTTCGATTTCAAAATATAATCAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCaaa < 2:3649889/149‑1 (MQ=255) tatCCTGTCTTTTGTTTTCGATTTCAAAATATAATTAATTTATTTTTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGt < 1:4147943/149‑1 (MQ=255) atCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTTTTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTg < 2:2620382/149‑1 (MQ=255) tGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTAGAGGAGTGAAAGGCAAAAAAACGGCCACCCGATAGGGAAGCCGTAGCAAAGTGcgcg > 2:2151661/1‑149 (MQ=255) gTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTTTTTTTAAATATCGAGATAACGATAACAAAAACGACAATATGAAAATTATTAGAGGAGTGAAAGGCAAAAAAAAGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCgt > 1:2490643/1‑149 (MQ=255) gTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCgt > 2:3556073/1‑149 (MQ=255) tgttttgttttgtTTTTAAAAATATAATGAAATTATTTGTTTTTAATTATCTAGATAACTATCACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCgtg < 1:3662808/146‑1 (MQ=255) tcttttgtttTCTATTAAAAAATATAATTAATTTATTTTTTTTTAAATATCTATATAACGATCACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCgtg < 1:3663118/146‑1 (MQ=255) tttgtttTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGttt > 2:1981174/1‑149 (MQ=255) tttgtttTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGAGCACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGttt < 2:1668808/149‑1 (MQ=255) ttgtttTCTATTTCAAAATATAATTAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGtttt < 2:3582925/149‑1 (MQ=255) tgtttTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGttttt > 1:735367/1‑149 (MQ=255) ttttCTATTTAAAAATATAATAAAATTATTTTTTTTAAAATATCGAGATAACTATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTAt < 1:5006526/149‑1 (MQ=255) ttttCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTAt > 1:5132746/1‑149 (MQ=255) tttCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAATCGGCCTCCCGATAGGGAAGCCGTAGCACAGTGCGCGTGTTTTTATg > 2:722398/1‑149 (MQ=255) tttCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATg > 1:99878/1‑149 (MQ=255) tttCGATTACAAAATATAATGAAATTATTTGATTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATg < 2:4843224/149‑1 (MQ=255) ttCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGc > 2:3984186/1‑149 (MQ=255) ttCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATg > 1:2381259/1‑149 (MQ=255) aaaaTATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCgg > 2:660909/1‑149 (MQ=255) aaaaTATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCgg > 2:766329/1‑149 (MQ=255) aaaaTATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCgg > 2:1717156/1‑149 (MQ=255) aaaTATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGgt > 1:3616809/1‑149 (MQ=255) tataATTAATTTTTTTTTTTTTAATTAGCTAGAAAACGAACACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTa < 1:1772740/149‑1 (MQ=255) tataATTAAATTTTTTTTTTTTAAATATCGAGATAACGATCACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTa < 1:3597933/149‑1 (MQ=255) ataATTAAATTATTTGTTTTTAAATATCTAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTaa < 1:343673/149‑1 (MQ=255) | TCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATA > CP009273/2170577‑2170872 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |